RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 UBAP2LQ14157 1087 aaKnown RBP14.41□□□□□ -0.1
SHKBP1-218ENST00000598907 FNDC3BQ53EP0 1204 aaKnown RBP14.41□□□□□ -0.1
SHKBP1-218ENST00000598907 C4orf17Q53FE4 359 aa14.41□□□□□ -0.1
SHKBP1-218ENST00000598907 SNX30Q5VWJ9 437 aa14.41□□□□□ -0.1
SHKBP1-218ENST00000598907 FAM35AQ86V20 835 aa14.41□□□□□ -0.1
SHKBP1-218ENST00000598907 LSMEM2Q8N112 164 aa14.41□□□□□ -0.1
SHKBP1-218ENST00000598907 CACTIN-AS1Q8N1I8 211 aa14.41□□□□□ -0.1
SHKBP1-218ENST00000598907 SYT11Q9BT88 431 aa14.41□□□□□ -0.1
SHKBP1-218ENST00000598907 NT5C1AQ9BXI3 368 aa14.41□□□□□ -0.1
SHKBP1-218ENST00000598907 ASCL3Q9NQ33 180 aa14.41□□□□□ -0.1
SHKBP1-218ENST00000598907 FBXO10Q9UK96 956 aa14.41□□□□□ -0.1
SHKBP1-218ENST00000598907 NUDT5Q9UKK9 219 aa14.41□□□□□ -0.1
SHKBP1-218ENST00000598907 A0A1W2PPC4 97 aa14.4□□□□□ -0.1
SHKBP1-218ENST00000598907 A8MXQ7 604 aa14.4□□□□□ -0.1
SHKBP1-218ENST00000598907 GOLGA6L6A8MZA4 724 aa14.4□□□□□ -0.1
SHKBP1-218ENST00000598907 WNT9AO14904 365 aa14.4□□□□□ -0.1
SHKBP1-218ENST00000598907 CSO75390 466 aaKnown RBP14.4□□□□□ -0.1
SHKBP1-218ENST00000598907 ZDHHC11BP0C7U3 371 aa14.4□□□□□ -0.1
SHKBP1-218ENST00000598907 KRT5P13647 590 aa14.4□□□□□ -0.1
SHKBP1-218ENST00000598907 CD38P28907 300 aa14.4□□□□□ -0.1
SHKBP1-218ENST00000598907 USP8P40818 1118 aa14.4□□□□□ -0.1
SHKBP1-218ENST00000598907 BPIFB4P59827 614 aa14.4□□□□□ -0.1
SHKBP1-218ENST00000598907 RPS14P62263 151 aaKnown RBP14.4□□□□□ -0.1
SHKBP1-218ENST00000598907 CAMK2GQ13555 558 aaPredicted RBP14.4□□□□□ -0.1
SHKBP1-218ENST00000598907 ASIC2Q16515 512 aa14.4□□□□□ -0.1
SHKBP1-218ENST00000598907 TTC31Q49AM3 519 aaPredicted RBP14.4□□□□□ -0.1
SHKBP1-218ENST00000598907 C3orf38Q5JPI3 329 aa14.4□□□□□ -0.1
SHKBP1-218ENST00000598907 FYB2Q5VWT5 728 aa14.4□□□□□ -0.1
SHKBP1-218ENST00000598907 SLC47A2Q86VL8 602 aa14.4□□□□□ -0.1
SHKBP1-218ENST00000598907 TMEM139Q8IV31 216 aa14.4□□□□□ -0.1
SHKBP1-218ENST00000598907 B3GALNT2Q8NCR0 500 aa14.4□□□□□ -0.1
SHKBP1-218ENST00000598907 CYB5D2Q8WUJ1 264 aa14.4□□□□□ -0.1
SHKBP1-218ENST00000598907 DEPDC7Q96QD5 511 aa14.4□□□□□ -0.1
SHKBP1-218ENST00000598907 ZSWIM1Q9BR11 485 aa14.4□□□□□ -0.1
SHKBP1-218ENST00000598907 ARHGAP9Q9BRR9 750 aa14.4□□□□□ -0.1
SHKBP1-218ENST00000598907 POLR1BQ9H9Y6 1135 aa14.4□□□□□ -0.1
SHKBP1-218ENST00000598907 EBF2Q9HAK2 575 aa14.4□□□□□ -0.1
SHKBP1-218ENST00000598907 SGK2Q9HBY8 427 aa14.4□□□□□ -0.1
SHKBP1-218ENST00000598907 DMAP1Q9NPF5 467 aaPredicted RBP14.4□□□□□ -0.1
SHKBP1-218ENST00000598907 ACP6Q9NPH0 428 aa14.4□□□□□ -0.1
SHKBP1-218ENST00000598907 KRT82Q9NSB4 513 aa14.4□□□□□ -0.1
SHKBP1-218ENST00000598907 NOCTQ9UK39 431 aaKnown RBP14.4□□□□□ -0.1
SHKBP1-218ENST00000598907 KIAA1257Q9ULG3 409 aa14.4□□□□□ -0.1
SHKBP1-218ENST00000598907 CLEC4EQ9ULY5 219 aa14.4□□□□□ -0.1
SHKBP1-218ENST00000598907 NBPF19A0A087WUL8 3843 aa14.4□□□□□ -0.1
SHKBP1-218ENST00000598907 ATP8B3O60423 1300 aa14.4□□□□□ -0.1
SHKBP1-218ENST00000598907 NOTCH2Q04721 2471 aa14.39□□□□□ -0.11
SHKBP1-218ENST00000598907 DXOO77932 396 aaKnown RBP14.39□□□□□ -0.11
SHKBP1-218ENST00000598907 PENKP01210 267 aaPredicted RBP14.39□□□□□ -0.11
SHKBP1-218ENST00000598907 SERPING1P05155 500 aa14.39□□□□□ -0.11
SHKBP1-218ENST00000598907 CCDC172P0C7W6 258 aa14.39□□□□□ -0.11
SHKBP1-218ENST00000598907 VDRP11473 427 aa14.39□□□□□ -0.11
SHKBP1-218ENST00000598907 CYP11B1P15538 503 aa14.39□□□□□ -0.11
SHKBP1-218ENST00000598907 ACP1P24666 158 aa14.39□□□□□ -0.11
SHKBP1-218ENST00000598907 ATP5C1P36542 298 aaKnown RBP14.39□□□□□ -0.11
SHKBP1-218ENST00000598907 LSSP48449 732 aa14.39□□□□□ -0.11
SHKBP1-218ENST00000598907 PTK2Q05397 1052 aa14.39□□□□□ -0.11
SHKBP1-218ENST00000598907 EIF4HQ15056 248 aaKnown RBP14.39□□□□□ -0.11
SHKBP1-218ENST00000598907 PROX2Q3B8N5 592 aa14.39□□□□□ -0.11
SHKBP1-218ENST00000598907 ZNF394Q53GI3 561 aa14.39□□□□□ -0.11
SHKBP1-218ENST00000598907 TMEM215Q68D42 235 aa14.39□□□□□ -0.11
SHKBP1-218ENST00000598907 Q6ZNB5 142 aa14.39□□□□□ -0.11
SHKBP1-218ENST00000598907 ACOT1Q86TX2 421 aa14.39□□□□□ -0.11
SHKBP1-218ENST00000598907 NOP9Q86U38 636 aaKnown RBP14.39□□□□□ -0.11
SHKBP1-218ENST00000598907 LRRC8AQ8IWT6 810 aa14.39□□□□□ -0.11
SHKBP1-218ENST00000598907 EPS8L1Q8TE68 723 aa14.39□□□□□ -0.11
SHKBP1-218ENST00000598907 TFAP2BQ92481 460 aa14.39□□□□□ -0.11
SHKBP1-218ENST00000598907 PIWIL1Q96J94 861 aaKnown RBP14.39□□□□□ -0.11
SHKBP1-218ENST00000598907 TNIP3Q96KP6 325 aa14.39□□□□□ -0.11
SHKBP1-218ENST00000598907 TLR8Q9NR97 1041 aaKnown RBP14.39□□□□□ -0.11
SHKBP1-218ENST00000598907 ARHGAP20Q9P2F6 1191 aa14.39□□□□□ -0.11
SHKBP1-218ENST00000598907 BZW2Q9Y6E2 419 aaKnown RBP14.39□□□□□ -0.11
SHKBP1-218ENST00000598907 ANKRD17O75179 2603 aaKnown RBP14.38□□□□□ -0.11
SHKBP1-218ENST00000598907 AHCTF1Q8WYP5 2266 aa14.38□□□□□ -0.11
SHKBP1-218ENST00000598907 SUV39H1O43463 412 aa14.38□□□□□ -0.11
SHKBP1-218ENST00000598907 SIGLEC6O43699 453 aa14.38□□□□□ -0.11
SHKBP1-218ENST00000598907 CALCAP01258 141 aa14.38□□□□□ -0.11
SHKBP1-218ENST00000598907 HMBSP08397 361 aa14.38□□□□□ -0.11
SHKBP1-218ENST00000598907 SKILP12757 684 aa14.38□□□□□ -0.11
SHKBP1-218ENST00000598907 CHRNB2P17787 502 aa14.38□□□□□ -0.11
SHKBP1-218ENST00000598907 GNA15P30679 374 aa14.38□□□□□ -0.11
SHKBP1-218ENST00000598907 NXPH1P58417 271 aa14.38□□□□□ -0.11
SHKBP1-218ENST00000598907 E2F1Q01094 437 aa14.38□□□□□ -0.11
SHKBP1-218ENST00000598907 TLE1Q04724 770 aa14.38□□□□□ -0.11
SHKBP1-218ENST00000598907 MAPK8IP2Q13387 824 aaPredicted RBP14.38□□□□□ -0.11
SHKBP1-218ENST00000598907 TSR1Q2NL82 804 aaKnown RBP14.38□□□□□ -0.11
SHKBP1-218ENST00000598907 ARHGAP17Q68EM7 881 aa14.38□□□□□ -0.11
SHKBP1-218ENST00000598907 NCEH1Q6PIU2 408 aa14.38□□□□□ -0.11
SHKBP1-218ENST00000598907 ZNF677Q86XU0 584 aa14.38□□□□□ -0.11
SHKBP1-218ENST00000598907 ZNF606Q8WXB4 792 aa14.38□□□□□ -0.11
SHKBP1-218ENST00000598907 CHP1Q99653 195 aa14.38□□□□□ -0.11
SHKBP1-218ENST00000598907 HAUS4Q9H6D7 363 aa14.38□□□□□ -0.11
SHKBP1-218ENST00000598907 OSER1Q9NX31 292 aa14.38□□□□□ -0.11
SHKBP1-218ENST00000598907 SEPT3Q9UH03 358 aa14.38□□□□□ -0.11
SHKBP1-218ENST00000598907 SATB2Q9UPW6 733 aa14.38□□□□□ -0.11
SHKBP1-218ENST00000598907 SSU72P8A0A1W2PR75 194 aa14.37□□□□□ -0.11
SHKBP1-218ENST00000598907 TRIM38O00635 465 aa14.37□□□□□ -0.11
SHKBP1-218ENST00000598907 AP1G2O75843 785 aa14.37□□□□□ -0.11
SHKBP1-218ENST00000598907 STC2O76061 302 aa14.37□□□□□ -0.11
SHKBP1-218ENST00000598907 PLEKP08567 350 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms