RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 RXFP2Q8WXD0 754 aa15.49■□□□□ 0.07
LIG1-215ENST00000597901 SNX19Q92543 992 aa15.49■□□□□ 0.07
LIG1-215ENST00000597901 NAT10Q9H0A0 1025 aaKnown RBP15.49■□□□□ 0.07
LIG1-215ENST00000597901 OSGEPQ9NPF4 335 aa15.49■□□□□ 0.07
LIG1-215ENST00000597901 METTL5Q9NRN9 209 aaKnown RBP15.49■□□□□ 0.07
LIG1-215ENST00000597901 MPP6Q9NZW5 540 aa15.49■□□□□ 0.07
LIG1-215ENST00000597901 SERGEFQ9UGK8 458 aa15.49■□□□□ 0.07
LIG1-215ENST00000597901 ADAMTS1Q9UHI8 967 aa15.49■□□□□ 0.07
LIG1-215ENST00000597901 VPS28Q9UK41 221 aa15.49■□□□□ 0.07
LIG1-215ENST00000597901 SLCO1B1Q9Y6L6 691 aa15.49■□□□□ 0.07
LIG1-215ENST00000597901 SPTBN2O15020 2390 aa15.48■□□□□ 0.07
LIG1-215ENST00000597901 IGLV3-10A0A075B6K4 115 aa15.48■□□□□ 0.07
LIG1-215ENST00000597901 A0A1W2PP55 124 aa15.48■□□□□ 0.07
LIG1-215ENST00000597901 FAM47DPA6NHR8 397 aa15.48■□□□□ 0.07
LIG1-215ENST00000597901 RNASEH2AO75792 299 aaKnown RBP15.48■□□□□ 0.07
LIG1-215ENST00000597901 IL1BP01584 269 aa15.48■□□□□ 0.07
LIG1-215ENST00000597901 GOT1P17174 413 aa15.48■□□□□ 0.07
LIG1-215ENST00000597901 C5AR1P21730 350 aa15.48■□□□□ 0.07
LIG1-215ENST00000597901 CD27P26842 260 aa15.48■□□□□ 0.07
LIG1-215ENST00000597901 RDXP35241 583 aaKnown RBP15.48■□□□□ 0.07
LIG1-215ENST00000597901 PSMD8P48556 350 aa15.48■□□□□ 0.07
LIG1-215ENST00000597901 ATP11AP98196 1134 aa15.48■□□□□ 0.07
LIG1-215ENST00000597901 ZNF252P-AS1Q0IIN9 211 aa15.48■□□□□ 0.07
LIG1-215ENST00000597901 PTP4A2Q12974 167 aa15.48■□□□□ 0.07
LIG1-215ENST00000597901 CCDC14Q49A88 953 aa15.48■□□□□ 0.07
LIG1-215ENST00000597901 ANO6Q4KMQ2 910 aa15.48■□□□□ 0.07
LIG1-215ENST00000597901 KIAA0895LQ68EN5 471 aa15.48■□□□□ 0.07
LIG1-215ENST00000597901 LRSAM1Q6UWE0 723 aa15.48■□□□□ 0.07
LIG1-215ENST00000597901 SETD3Q86TU7 594 aaPredicted RBP15.48■□□□□ 0.07
LIG1-215ENST00000597901 FAM131BQ86XD5 332 aa15.48■□□□□ 0.07
LIG1-215ENST00000597901 AADATQ8N5Z0 425 aa15.48■□□□□ 0.07
LIG1-215ENST00000597901 AGPAT1Q99943 283 aa15.48■□□□□ 0.07
LIG1-215ENST00000597901 C11orf70Q9BRQ4 267 aa15.48■□□□□ 0.07
LIG1-215ENST00000597901 MUC3BQ9H195 1237 aa15.48■□□□□ 0.07
LIG1-215ENST00000597901 ADAM22Q9P0K1 906 aa15.48■□□□□ 0.07
LIG1-215ENST00000597901 SLC25A13Q9UJS0 675 aa15.48■□□□□ 0.07
LIG1-215ENST00000597901 A0A1B0GVT2 93 aa15.47■□□□□ 0.07
LIG1-215ENST00000597901 C2CD4BA6NLJ0 364 aa15.47■□□□□ 0.07
LIG1-215ENST00000597901 SMTNL1A8MU46 457 aa15.47■□□□□ 0.07
LIG1-215ENST00000597901 E9PAM4 449 aa15.47■□□□□ 0.07
LIG1-215ENST00000597901 TEX33O43247 280 aa15.47■□□□□ 0.07
LIG1-215ENST00000597901 GJB6O95452 261 aa15.47■□□□□ 0.07
LIG1-215ENST00000597901 ADH1BP00325 375 aa15.47■□□□□ 0.07
LIG1-215ENST00000597901 MT-CO1P00395 513 aa15.47■□□□□ 0.07
LIG1-215ENST00000597901 IGHV4-34P06331 123 aa15.47■□□□□ 0.07
LIG1-215ENST00000597901 RHOCP08134 193 aa15.47■□□□□ 0.07
LIG1-215ENST00000597901 KRT3P12035 628 aa15.47■□□□□ 0.07
LIG1-215ENST00000597901 ADRA1BP35368 520 aa15.47■□□□□ 0.07
LIG1-215ENST00000597901 AFF3P51826 1226 aaKnown RBP15.47■□□□□ 0.07
LIG1-215ENST00000597901 KRT83P78385 493 aa15.47■□□□□ 0.07
LIG1-215ENST00000597901 SHC2P98077 582 aa15.47■□□□□ 0.07
LIG1-215ENST00000597901 ELAVL3Q14576 367 aaKnown RBP15.47■□□□□ 0.07
LIG1-215ENST00000597901 CLEC16AQ2KHT3 1053 aa15.47■□□□□ 0.07
LIG1-215ENST00000597901 HLA-BQ31612 363 aa15.47■□□□□ 0.07
LIG1-215ENST00000597901 RAB6CQ53S08 254 aa15.47■□□□□ 0.07
LIG1-215ENST00000597901 NCEH1Q6PIU2 408 aa15.47■□□□□ 0.07
LIG1-215ENST00000597901 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.47■□□□□ 0.07
LIG1-215ENST00000597901 PHF13Q86YI8 300 aaPredicted RBP15.47■□□□□ 0.07
LIG1-215ENST00000597901 SH2D3CQ8N5H7 860 aa15.47■□□□□ 0.07
LIG1-215ENST00000597901 JOSD2Q8TAC2 188 aa15.47■□□□□ 0.07
LIG1-215ENST00000597901 PSMB7Q99436 277 aa15.47■□□□□ 0.07
LIG1-215ENST00000597901 BPIFA3Q9BQP9 254 aa15.47■□□□□ 0.07
LIG1-215ENST00000597901 ORAI3Q9BRQ5 295 aa15.47■□□□□ 0.07
LIG1-215ENST00000597901 RAB6CQ9H0N0 254 aa15.47■□□□□ 0.07
LIG1-215ENST00000597901 GAREM1Q9H706 876 aa15.47■□□□□ 0.07
LIG1-215ENST00000597901 IL21RQ9HBE5 538 aa15.47■□□□□ 0.07
LIG1-215ENST00000597901 TM9SF3Q9HD45 589 aa15.47■□□□□ 0.07
LIG1-215ENST00000597901 FZD4Q9ULV1 537 aa15.47■□□□□ 0.07
LIG1-215ENST00000597901 TNRC6BQ9UPQ9 1833 aaKnown RBP15.47■□□□□ 0.07
LIG1-215ENST00000597901 CKAP5Q14008 2032 aa15.46■□□□□ 0.07
LIG1-215ENST00000597901 A0A0D9SEW6 157 aa15.46■□□□□ 0.07
LIG1-215ENST00000597901 SPAARA0A1B0GVQ0 90 aa15.46■□□□□ 0.07
LIG1-215ENST00000597901 LRRC72A6NJI9 287 aa15.46■□□□□ 0.07
LIG1-215ENST00000597901 MCF2LO15068 1137 aa15.46■□□□□ 0.07
LIG1-215ENST00000597901 SH3BP5O60239 455 aa15.46■□□□□ 0.07
LIG1-215ENST00000597901 SNAP91O60641 907 aa15.46■□□□□ 0.07
LIG1-215ENST00000597901 OR1E1P30953 314 aa15.46■□□□□ 0.07
LIG1-215ENST00000597901 SDC4P31431 198 aa15.46■□□□□ 0.07
LIG1-215ENST00000597901 RFC1P35251 1148 aaPredicted RBP15.46■□□□□ 0.07
LIG1-215ENST00000597901 NSFP46459 744 aaKnown RBP15.46■□□□□ 0.07
LIG1-215ENST00000597901 CDO1Q16878 200 aa15.46■□□□□ 0.07
LIG1-215ENST00000597901 C15orf59Q2T9L4 293 aaPredicted RBP15.46■□□□□ 0.07
LIG1-215ENST00000597901 KIF19Q2TAC6 998 aa15.46■□□□□ 0.07
LIG1-215ENST00000597901 C6orf118Q5T5N4 469 aa15.46■□□□□ 0.07
LIG1-215ENST00000597901 IL27RAQ6UWB1 636 aa15.46■□□□□ 0.07
LIG1-215ENST00000597901 IRF2BP2Q7Z5L9 587 aa15.46■□□□□ 0.07
LIG1-215ENST00000597901 TFAP2DQ7Z6R9 452 aa15.46■□□□□ 0.07
LIG1-215ENST00000597901 OR2T34Q8NGX1 318 aa15.46■□□□□ 0.07
LIG1-215ENST00000597901 OR14C36Q8NHC7 312 aa15.46■□□□□ 0.07
LIG1-215ENST00000597901 OR8D1Q8WZ84 308 aa15.46■□□□□ 0.07
LIG1-215ENST00000597901 CENPIQ92674 756 aaPredicted RBP15.46■□□□□ 0.07
LIG1-215ENST00000597901 CAMK1GQ96NX5 476 aa15.46■□□□□ 0.07
LIG1-215ENST00000597901 C2orf49Q9BVC5 232 aaPredicted RBP15.46■□□□□ 0.07
LIG1-215ENST00000597901 EBF2Q9HAK2 575 aa15.46■□□□□ 0.07
LIG1-215ENST00000597901 RTN4Q9NQC3 1192 aaKnown RBP15.46■□□□□ 0.07
LIG1-215ENST00000597901 SARDHQ9UL12 918 aa15.46■□□□□ 0.07
LIG1-215ENST00000597901 PPM1HQ9ULR3 514 aa15.46■□□□□ 0.07
LIG1-215ENST00000597901 HS3ST2Q9Y278 367 aa15.46■□□□□ 0.07
LIG1-215ENST00000597901 A0A1W2PPC4 97 aa15.45■□□□□ 0.06
LIG1-215ENST00000597901 ILVBLA1L0T0 632 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms