RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 OR1E1P30953 314 aa17.17■□□□□ 0.34
SSBP4-204ENST00000597724 TPMTP51580 245 aa17.17■□□□□ 0.34
SSBP4-204ENST00000597724 AIF1P55008 147 aa17.17■□□□□ 0.34
SSBP4-204ENST00000597724 CCDC122Q5T0U0 273 aa17.17■□□□□ 0.34
SSBP4-204ENST00000597724 SLC36A4Q6YBV0 504 aa17.17■□□□□ 0.34
SSBP4-204ENST00000597724 ZNF783Q6ZMS7 281 aa17.17■□□□□ 0.34
SSBP4-204ENST00000597724 LPCAT2Q7L5N7 544 aa17.17■□□□□ 0.34
SSBP4-204ENST00000597724 TMEFF1Q8IYR6 380 aa17.17■□□□□ 0.34
SSBP4-204ENST00000597724 PYROXD2Q8N2H3 581 aa17.17■□□□□ 0.34
SSBP4-204ENST00000597724 PSMB7Q99436 277 aa17.17■□□□□ 0.34
SSBP4-204ENST00000597724 TRIM5Q9C035 493 aa17.17■□□□□ 0.34
SSBP4-204ENST00000597724 RBSNQ9H1K0 784 aa17.17■□□□□ 0.34
SSBP4-204ENST00000597724 SEMA4GQ9NTN9 838 aa17.17■□□□□ 0.34
SSBP4-204ENST00000597724 ABHD10Q9NUJ1 306 aa17.17■□□□□ 0.34
SSBP4-204ENST00000597724 SLC25A13Q9UJS0 675 aa17.17■□□□□ 0.34
SSBP4-204ENST00000597724 NENFQ9UMX5 172 aa17.17■□□□□ 0.34
SSBP4-204ENST00000597724 NEU3Q9UQ49 428 aa17.17■□□□□ 0.34
SSBP4-204ENST00000597724 EDDM13A0A1B0GTR0 161 aa17.16■□□□□ 0.34
SSBP4-204ENST00000597724 BCLAF3A2AJT9 711 aaKnown RBP17.16■□□□□ 0.34
SSBP4-204ENST00000597724 SIN3BO75182 1162 aa17.16■□□□□ 0.34
SSBP4-204ENST00000597724 RNF8O76064 485 aa17.16■□□□□ 0.34
SSBP4-204ENST00000597724 IGLV3-19P01714 112 aa17.16■□□□□ 0.34
SSBP4-204ENST00000597724 ACADMP11310 421 aa17.16■□□□□ 0.34
SSBP4-204ENST00000597724 RHOQP17081 205 aa17.16■□□□□ 0.34
SSBP4-204ENST00000597724 L1CAMP32004 1257 aa17.16■□□□□ 0.34
SSBP4-204ENST00000597724 DHPSP49366 369 aaPredicted RBP17.16■□□□□ 0.34
SSBP4-204ENST00000597724 ADKP55263 362 aaKnown RBP17.16■□□□□ 0.34
SSBP4-204ENST00000597724 RPS14P62263 151 aaKnown RBP17.16■□□□□ 0.34
SSBP4-204ENST00000597724 KRT83P78385 493 aa17.16■□□□□ 0.34
SSBP4-204ENST00000597724 ZBTB16Q05516 673 aa17.16■□□□□ 0.34
SSBP4-204ENST00000597724 TBX2Q13207 712 aaPredicted RBP17.16■□□□□ 0.34
SSBP4-204ENST00000597724 CSRP2Q16527 193 aa17.16■□□□□ 0.34
SSBP4-204ENST00000597724 TSR1Q2NL82 804 aaKnown RBP17.16■□□□□ 0.34
SSBP4-204ENST00000597724 ASTE1Q2TB18 679 aaPredicted RBP17.16■□□□□ 0.34
SSBP4-204ENST00000597724 EFHC2Q5JST6 749 aa17.16■□□□□ 0.34
SSBP4-204ENST00000597724 PLA2G2CQ5R387 149 aa17.16■□□□□ 0.34
SSBP4-204ENST00000597724 C9orf64Q5T6V5 341 aa17.16■□□□□ 0.34
SSBP4-204ENST00000597724 RWDD4Q6NW29 188 aaKnown RBP17.16■□□□□ 0.34
SSBP4-204ENST00000597724 NLRP14Q86W24 1093 aa17.16■□□□□ 0.34
SSBP4-204ENST00000597724 GAS2L3Q86XJ1 694 aa17.16■□□□□ 0.34
SSBP4-204ENST00000597724 PTPRN2Q92932 1015 aa17.16■□□□□ 0.34
SSBP4-204ENST00000597724 TBC1D31Q96DN5 1066 aa17.16■□□□□ 0.34
SSBP4-204ENST00000597724 C2orf49Q9BVC5 232 aaPredicted RBP17.16■□□□□ 0.34
SSBP4-204ENST00000597724 THAP2Q9H0W7 228 aa17.16■□□□□ 0.34
SSBP4-204ENST00000597724 RSPH9Q9H1X1 276 aaPredicted RBP17.16■□□□□ 0.34
SSBP4-204ENST00000597724 TMEM248Q9NWD8 314 aa17.16■□□□□ 0.34
SSBP4-204ENST00000597724 ZNHIT6Q9NWK9 470 aaKnown RBP17.16■□□□□ 0.34
SSBP4-204ENST00000597724 WSB2Q9NYS7 404 aaPredicted RBP17.16■□□□□ 0.34
SSBP4-204ENST00000597724 USP18Q9UMW8 372 aa17.16■□□□□ 0.34
SSBP4-204ENST00000597724 ATP9BO43861 1147 aa17.15■□□□□ 0.34
SSBP4-204ENST00000597724 SNAP91O60641 907 aa17.15■□□□□ 0.34
SSBP4-204ENST00000597724 MFAP3LO75121 409 aa17.15■□□□□ 0.34
SSBP4-204ENST00000597724 ZNF806P0C7X5 589 aa17.15■□□□□ 0.34
SSBP4-204ENST00000597724 CD6P30203 668 aa17.15■□□□□ 0.34
SSBP4-204ENST00000597724 OXTRP30559 389 aa17.15■□□□□ 0.34
SSBP4-204ENST00000597724 MPLP40238 635 aa17.15■□□□□ 0.34
SSBP4-204ENST00000597724 MAPKAPK2P49137 400 aa17.15■□□□□ 0.34
SSBP4-204ENST00000597724 RPL6Q02878 288 aaKnown RBP17.15■□□□□ 0.34
SSBP4-204ENST00000597724 CREB5Q02930 508 aa17.15■□□□□ 0.34
SSBP4-204ENST00000597724 GFPT1Q06210 699 aaPredicted RBP17.15■□□□□ 0.34
SSBP4-204ENST00000597724 SEMA3BQ13214 749 aa17.15■□□□□ 0.34
SSBP4-204ENST00000597724 MAPK8IP2Q13387 824 aaPredicted RBP17.15■□□□□ 0.34
SSBP4-204ENST00000597724 SLC18A3Q16572 532 aa17.15■□□□□ 0.34
SSBP4-204ENST00000597724 ZNF776Q68DI1 518 aaPredicted RBP17.15■□□□□ 0.34
SSBP4-204ENST00000597724 CACUL1Q86Y37 369 aa17.15■□□□□ 0.34
SSBP4-204ENST00000597724 DCAF4L2Q8NA75 395 aa17.15■□□□□ 0.34
SSBP4-204ENST00000597724 OR7D4Q8NG98 312 aa17.15■□□□□ 0.34
SSBP4-204ENST00000597724 FRS2Q8WU20 508 aa17.15■□□□□ 0.34
SSBP4-204ENST00000597724 FAM129BQ96TA1 746 aa17.15■□□□□ 0.34
SSBP4-204ENST00000597724 NDFIP2Q9NV92 336 aa17.15■□□□□ 0.34
SSBP4-204ENST00000597724 VPS51Q9UID3 782 aa17.15■□□□□ 0.34
SSBP4-204ENST00000597724 GON4LQ3T8J9 2241 aa17.15■□□□□ 0.34
SSBP4-204ENST00000597724 NUP205Q92621 2012 aa17.14■□□□□ 0.34
SSBP4-204ENST00000597724 CEP192Q8TEP8 1941 aa17.14■□□□□ 0.33
SSBP4-204ENST00000597724 SSU72P8A0A1W2PR75 194 aa17.14■□□□□ 0.33
SSBP4-204ENST00000597724 LRCH4O75427 683 aa17.14■□□□□ 0.33
SSBP4-204ENST00000597724 MT-CO1P00395 513 aa17.14■□□□□ 0.33
SSBP4-204ENST00000597724 CYP1A2P05177 515 aa17.14■□□□□ 0.33
SSBP4-204ENST00000597724 PTGER3P43115 390 aa17.14■□□□□ 0.33
SSBP4-204ENST00000597724 GALCP54803 685 aa17.14■□□□□ 0.33
SSBP4-204ENST00000597724 GNA12Q03113 381 aa17.14■□□□□ 0.33
SSBP4-204ENST00000597724 ACAP1Q15027 740 aa17.14■□□□□ 0.33
SSBP4-204ENST00000597724 DLG2Q15700 870 aa17.14■□□□□ 0.33
SSBP4-204ENST00000597724 CCDC6Q16204 474 aa17.14■□□□□ 0.33
SSBP4-204ENST00000597724 CNGA4Q8IV77 575 aa17.14■□□□□ 0.33
SSBP4-204ENST00000597724 SH2D3CQ8N5H7 860 aa17.14■□□□□ 0.33
SSBP4-204ENST00000597724 TOE1Q96GM8 510 aaKnown RBP17.14■□□□□ 0.33
SSBP4-204ENST00000597724 CHP1Q99653 195 aa17.14■□□□□ 0.33
SSBP4-204ENST00000597724 EPAS1Q99814 870 aa17.14■□□□□ 0.33
SSBP4-204ENST00000597724 NCAPGQ9BPX3 1015 aa17.14■□□□□ 0.33
SSBP4-204ENST00000597724 AP4E1Q9UPM8 1137 aa17.14■□□□□ 0.33
SSBP4-204ENST00000597724 HS3ST2Q9Y278 367 aa17.14■□□□□ 0.33
SSBP4-204ENST00000597724 CEP250Q9BV73 2442 aa17.13■□□□□ 0.33
SSBP4-204ENST00000597724 AKR1B15C9JRZ8 316 aaPredicted RBP17.13■□□□□ 0.33
SSBP4-204ENST00000597724 CREB3O43889 395 aa17.13■□□□□ 0.33
SSBP4-204ENST00000597724 RNASEH1O60930 286 aaKnown RBP17.13■□□□□ 0.33
SSBP4-204ENST00000597724 NDUFS2O75306 463 aa17.13■□□□□ 0.33
SSBP4-204ENST00000597724 DNTTP04053 509 aa17.13■□□□□ 0.33
SSBP4-204ENST00000597724 SRCP12931 536 aa17.13■□□□□ 0.33
SSBP4-204ENST00000597724 VAV1P15498 845 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms