RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 P2RY11Q96G91 374 aa15.01□□□□□ -0.01
VRK3-212ENST00000596814 LINC00597Q9H2U6 94 aa15.01□□□□□ -0.01
VRK3-212ENST00000596814 USP29Q9HBJ7 922 aa15.01□□□□□ -0.01
VRK3-212ENST00000596814 PCDH9Q9HC56 1237 aa15.01□□□□□ -0.01
VRK3-212ENST00000596814 SPHK2Q9NRA0 654 aa15.01□□□□□ -0.01
VRK3-212ENST00000596814 PLK2Q9NYY3 685 aa15.01□□□□□ -0.01
VRK3-212ENST00000596814 ASIC3Q9UHC3 531 aa15.01□□□□□ -0.01
VRK3-212ENST00000596814 TBC1D30Q9Y2I9 924 aa15.01□□□□□ -0.01
VRK3-212ENST00000596814 NEU2Q9Y3R4 380 aa15.01□□□□□ -0.01
VRK3-212ENST00000596814 ILVBLA1L0T0 632 aa15□□□□□ -0.01
VRK3-212ENST00000596814 GRXCR2A6NFK2 248 aa15□□□□□ -0.01
VRK3-212ENST00000596814 ZSCAN5CA6NGD5 496 aaPredicted RBP15□□□□□ -0.01
VRK3-212ENST00000596814 TERF1P54274 439 aa15□□□□□ -0.01
VRK3-212ENST00000596814 RNF43Q68DV7 783 aa15□□□□□ -0.01
VRK3-212ENST00000596814 TIGD7Q6NT04 549 aaPredicted RBP15□□□□□ -0.01
VRK3-212ENST00000596814 VITQ6UXI7 678 aa15□□□□□ -0.01
VRK3-212ENST00000596814 ARHGAP36Q6ZRI8 547 aa15□□□□□ -0.01
VRK3-212ENST00000596814 OTOP3Q7RTS5 596 aa15□□□□□ -0.01
VRK3-212ENST00000596814 ZNF354CQ86Y25 554 aa15□□□□□ -0.01
VRK3-212ENST00000596814 TMEM25Q86YD3 366 aa15□□□□□ -0.01
VRK3-212ENST00000596814 GLIS1Q8NBF1 620 aa15□□□□□ -0.01
VRK3-212ENST00000596814 ST13P5Q8NFI4 369 aaPredicted RBP15□□□□□ -0.01
VRK3-212ENST00000596814 OR52K2Q8NGK3 314 aa15□□□□□ -0.01
VRK3-212ENST00000596814 CCHCR1Q8TD31 782 aa15□□□□□ -0.01
VRK3-212ENST00000596814 PPM1EQ8WY54 764 aa15□□□□□ -0.01
VRK3-212ENST00000596814 RUBCNQ92622 972 aa15□□□□□ -0.01
VRK3-212ENST00000596814 ARHGEF2Q92974 986 aaKnown RBP15□□□□□ -0.01
VRK3-212ENST00000596814 RTP4Q96DX8 246 aa15□□□□□ -0.01
VRK3-212ENST00000596814 TSGA13Q96PP4 275 aa15□□□□□ -0.01
VRK3-212ENST00000596814 ERP44Q9BS26 406 aa15□□□□□ -0.01
VRK3-212ENST00000596814 MAGEH1Q9H213 219 aa15□□□□□ -0.01
VRK3-212ENST00000596814 THG1LQ9NWX6 298 aaKnown RBP15□□□□□ -0.01
VRK3-212ENST00000596814 SEPT10Q9P0V9 454 aa15□□□□□ -0.01
VRK3-212ENST00000596814 NEDD8-MDP1E9PL57 170 aa15□□□□□ -0.01
VRK3-212ENST00000596814 MTSS1O43312 755 aa15□□□□□ -0.01
VRK3-212ENST00000596814 MAFKO60675 156 aa15□□□□□ -0.01
VRK3-212ENST00000596814 STK10O94804 968 aaKnown RBP15□□□□□ -0.01
VRK3-212ENST00000596814 PENKP01210 267 aaPredicted RBP15□□□□□ -0.01
VRK3-212ENST00000596814 ETS1P14921 441 aa15□□□□□ -0.01
VRK3-212ENST00000596814 CCNCP24863 283 aa15□□□□□ -0.01
VRK3-212ENST00000596814 ACVRL1P37023 503 aa15□□□□□ -0.01
VRK3-212ENST00000596814 ETFBP38117 255 aa15□□□□□ -0.01
VRK3-212ENST00000596814 VPS41P49754 854 aa15□□□□□ -0.01
VRK3-212ENST00000596814 NRLP54845 237 aa15□□□□□ -0.01
VRK3-212ENST00000596814 ANO4Q32M45 955 aa15□□□□□ -0.01
VRK3-212ENST00000596814 P3H1Q32P28 736 aa15□□□□□ -0.01
VRK3-212ENST00000596814 EML3Q32P44 896 aa15□□□□□ -0.01
VRK3-212ENST00000596814 LY6G5CQ5SRR4 150 aa15□□□□□ -0.01
VRK3-212ENST00000596814 TRIM68Q6AZZ1 485 aa15□□□□□ -0.01
VRK3-212ENST00000596814 ZNF783Q6ZMS7 281 aa15□□□□□ -0.01
VRK3-212ENST00000596814 MTSS1LQ765P7 747 aa15□□□□□ -0.01
VRK3-212ENST00000596814 PRUNE1Q86TP1 453 aa15□□□□□ -0.01
VRK3-212ENST00000596814 ADGRG2Q8IZP9 1017 aa15□□□□□ -0.01
VRK3-212ENST00000596814 WFDC5Q8TCV5 224 aa15□□□□□ -0.01
VRK3-212ENST00000596814 ELSPBP1Q96BH3 223 aa15□□□□□ -0.01
VRK3-212ENST00000596814 ASIC4Q96FT7 647 aa15□□□□□ -0.01
VRK3-212ENST00000596814 BBS2Q9BXC9 721 aa15□□□□□ -0.01
VRK3-212ENST00000596814 TRIM31Q9BZY9 425 aa15□□□□□ -0.01
VRK3-212ENST00000596814 MUC3BQ9H195 1237 aa15□□□□□ -0.01
VRK3-212ENST00000596814 SP110Q9HB58 689 aa15□□□□□ -0.01
VRK3-212ENST00000596814 EPB41L5Q9HCM4 733 aa15□□□□□ -0.01
VRK3-212ENST00000596814 MARK1Q9P0L2 795 aa15□□□□□ -0.01
VRK3-212ENST00000596814 EPS15L1Q9UBC2 864 aa15□□□□□ -0.01
VRK3-212ENST00000596814 IPO11Q9UI26 975 aaKnown RBP15□□□□□ -0.01
VRK3-212ENST00000596814 A0A0D9SEW6 157 aa14.99□□□□□ -0.01
VRK3-212ENST00000596814 KCNK1O00180 336 aa14.99□□□□□ -0.01
VRK3-212ENST00000596814 RNF103O00237 685 aa14.99□□□□□ -0.01
VRK3-212ENST00000596814 MBTPS2O43462 519 aa14.99□□□□□ -0.01
VRK3-212ENST00000596814 NFATC1O95644 943 aa14.99□□□□□ -0.01
VRK3-212ENST00000596814 ADH1CP00326 375 aa14.99□□□□□ -0.01
VRK3-212ENST00000596814 CYP17A1P05093 508 aa14.99□□□□□ -0.01
VRK3-212ENST00000596814 ZSCAN5DPP0CG00 497 aa14.99□□□□□ -0.01
VRK3-212ENST00000596814 ACTN2P35609 894 aa14.99□□□□□ -0.01
VRK3-212ENST00000596814 CLCN6P51797 869 aa14.99□□□□□ -0.01
VRK3-212ENST00000596814 FCHO2Q0JRZ9 810 aa14.99□□□□□ -0.01
VRK3-212ENST00000596814 SERINC3Q13530 473 aa14.99□□□□□ -0.01
VRK3-212ENST00000596814 PDGFRLQ15198 375 aa14.99□□□□□ -0.01
VRK3-212ENST00000596814 FSCBQ5H9T9 825 aa14.99□□□□□ -0.01
VRK3-212ENST00000596814 RNF219Q5W0B1 726 aaPredicted RBP14.99□□□□□ -0.01
VRK3-212ENST00000596814 DUPD1Q68J44 220 aa14.99□□□□□ -0.01
VRK3-212ENST00000596814 IL31Q6EBC2 164 aa14.99□□□□□ -0.01
VRK3-212ENST00000596814 PARM1Q6UWI2 310 aa14.99□□□□□ -0.01
VRK3-212ENST00000596814 MFSD6LQ8IWD5 586 aa14.99□□□□□ -0.01
VRK3-212ENST00000596814 YAF2Q8IY57 180 aa14.99□□□□□ -0.01
VRK3-212ENST00000596814 OR7D4Q8NG98 312 aa14.99□□□□□ -0.01
VRK3-212ENST00000596814 ATP2A3Q93084 1043 aa14.99□□□□□ -0.01
VRK3-212ENST00000596814 PNKPQ96T60 521 aa14.99□□□□□ -0.01
VRK3-212ENST00000596814 HINFPQ9BQA5 517 aa14.99□□□□□ -0.01
VRK3-212ENST00000596814 KXD1Q9BQD3 176 aa14.99□□□□□ -0.01
VRK3-212ENST00000596814 DPH5Q9H2P9 285 aa14.99□□□□□ -0.01
VRK3-212ENST00000596814 A0A0A0MRY4 1105 aa14.98□□□□□ -0.01
VRK3-212ENST00000596814 ESYT3A0FGR9 886 aa14.98□□□□□ -0.01
VRK3-212ENST00000596814 C5orf60A6NFR6 353 aa14.98□□□□□ -0.01
VRK3-212ENST00000596814 BHMG1C9JSJ3 638 aaPredicted RBP14.98□□□□□ -0.01
VRK3-212ENST00000596814 TYRP14679 529 aa14.98□□□□□ -0.01
VRK3-212ENST00000596814 SP100P23497 879 aaPredicted RBP14.98□□□□□ -0.01
VRK3-212ENST00000596814 OXCT1P55809 520 aa14.98□□□□□ -0.01
VRK3-212ENST00000596814 WASHC5Q12768 1159 aa14.98□□□□□ -0.01
VRK3-212ENST00000596814 DHCR24Q15392 516 aa14.98□□□□□ -0.01
VRK3-212ENST00000596814 RHBDF2Q6PJF5 856 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms