RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 NXPH1P58417 271 aa10.88□□□□□ -0.67
CHMP2A-202ENST00000596708 PPP2CBP62714 309 aa10.88□□□□□ -0.67
CHMP2A-202ENST00000596708 PPP2CAP67775 309 aa10.88□□□□□ -0.67
CHMP2A-202ENST00000596708 PITX1P78337 314 aaPredicted RBP10.88□□□□□ -0.67
CHMP2A-202ENST00000596708 CDK17Q00537 523 aa10.88□□□□□ -0.67
CHMP2A-202ENST00000596708 STAT4Q14765 748 aa10.88□□□□□ -0.67
CHMP2A-202ENST00000596708 FAM46CQ5VWP2 391 aa10.88□□□□□ -0.67
CHMP2A-202ENST00000596708 NAPEPLDQ6IQ20 393 aa10.88□□□□□ -0.67
CHMP2A-202ENST00000596708 DSG4Q86SJ6 1040 aa10.88□□□□□ -0.67
CHMP2A-202ENST00000596708 TMEM110Q86TL2 294 aa10.88□□□□□ -0.67
CHMP2A-202ENST00000596708 TRIM59Q8IWR1 403 aa10.88□□□□□ -0.67
CHMP2A-202ENST00000596708 DEFB106AQ8N104 65 aa10.88□□□□□ -0.67
CHMP2A-202ENST00000596708 OXR1Q8N573 874 aa10.88□□□□□ -0.67
CHMP2A-202ENST00000596708 MFSD2AQ8NA29 543 aa10.88□□□□□ -0.67
CHMP2A-202ENST00000596708 PIP4K2CQ8TBX8 421 aa10.88□□□□□ -0.67
CHMP2A-202ENST00000596708 NXPE2Q96DL1 559 aa10.88□□□□□ -0.67
CHMP2A-202ENST00000596708 RPRD1AQ96P16 312 aaPredicted RBP10.88□□□□□ -0.67
CHMP2A-202ENST00000596708 SPAG5Q96R06 1193 aa10.88□□□□□ -0.67
CHMP2A-202ENST00000596708 SRRTQ9BXP5 876 aaKnown RBP10.88□□□□□ -0.67
CHMP2A-202ENST00000596708 DDIT4Q9NX09 232 aa10.88□□□□□ -0.67
CHMP2A-202ENST00000596708 CYTH4Q9UIA0 394 aa10.88□□□□□ -0.67
CHMP2A-202ENST00000596708 CNTN6Q9UQ52 1028 aa10.88□□□□□ -0.67
CHMP2A-202ENST00000596708 CELSR3Q9NYQ7 3312 aa10.87□□□□□ -0.67
CHMP2A-202ENST00000596708 DSPP15924 2871 aaKnown RBP10.87□□□□□ -0.67
CHMP2A-202ENST00000596708 A0A087WV48 116 aa10.87□□□□□ -0.67
CHMP2A-202ENST00000596708 C1QTNF3-AMACRE9PGA6 284 aa10.87□□□□□ -0.67
CHMP2A-202ENST00000596708 BIN1O00499 593 aa10.87□□□□□ -0.67
CHMP2A-202ENST00000596708 RTN2O75298 545 aa10.87□□□□□ -0.67
CHMP2A-202ENST00000596708 GRAP2O75791 330 aa10.87□□□□□ -0.67
CHMP2A-202ENST00000596708 IGLV3-25P01717 112 aa10.87□□□□□ -0.67
CHMP2A-202ENST00000596708 CCR1P32246 355 aa10.87□□□□□ -0.67
CHMP2A-202ENST00000596708 RXRGP48443 463 aa10.87□□□□□ -0.67
CHMP2A-202ENST00000596708 ACADVLP49748 655 aa10.87□□□□□ -0.67
CHMP2A-202ENST00000596708 PLK1P53350 603 aa10.87□□□□□ -0.67
CHMP2A-202ENST00000596708 METAP1P53582 386 aa10.87□□□□□ -0.67
CHMP2A-202ENST00000596708 SEMG2Q02383 582 aa10.87□□□□□ -0.67
CHMP2A-202ENST00000596708 TARDBPQ13148 414 aaKnown RBP eCLIP10.87□□□□□ -0.67
CHMP2A-202ENST00000596708 TAF5Q15542 800 aa10.87□□□□□ -0.67
CHMP2A-202ENST00000596708 MEA1Q16626 185 aa10.87□□□□□ -0.67
CHMP2A-202ENST00000596708 ARHGAP44Q17R89 818 aa10.87□□□□□ -0.67
CHMP2A-202ENST00000596708 POM121L1PQ3SYA9 428 aa10.87□□□□□ -0.67
CHMP2A-202ENST00000596708 HES3Q5TGS1 186 aa10.87□□□□□ -0.67
CHMP2A-202ENST00000596708 TTC39BQ5VTQ0 682 aaPredicted RBP10.87□□□□□ -0.67
CHMP2A-202ENST00000596708 OR6B2Q6IFH4 312 aa10.87□□□□□ -0.67
CHMP2A-202ENST00000596708 FBXL22Q6P050 247 aa10.87□□□□□ -0.67
CHMP2A-202ENST00000596708 LRRC69Q6ZNQ3 347 aa10.87□□□□□ -0.67
CHMP2A-202ENST00000596708 FRS2Q8WU20 508 aa10.87□□□□□ -0.67
CHMP2A-202ENST00000596708 CRELD1Q96HD1 420 aa10.87□□□□□ -0.67
CHMP2A-202ENST00000596708 BBC3Q96PG8 261 aaPredicted RBP10.87□□□□□ -0.67
CHMP2A-202ENST00000596708 PRMT1Q99873 361 aaKnown RBP10.87□□□□□ -0.67
CHMP2A-202ENST00000596708 KDM4CQ9H3R0 1056 aa10.87□□□□□ -0.67
CHMP2A-202ENST00000596708 ERVMER34-1Q9H9K5 563 aa10.87□□□□□ -0.67
CHMP2A-202ENST00000596708 ACP6Q9NPH0 428 aa10.87□□□□□ -0.67
CHMP2A-202ENST00000596708 SARDHQ9UL12 918 aa10.87□□□□□ -0.67
CHMP2A-202ENST00000596708 VANGL2Q9ULK5 521 aa10.87□□□□□ -0.67
CHMP2A-202ENST00000596708 RP1P56715 2156 aa10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 C10orf142B7Z368 130 aa10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 SLC7A4O43246 635 aa10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 LATO43561 262 aa10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 PLRG1O43660 514 aaKnown RBP10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 SDC3O75056 442 aa10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 FGFR1OPO95684 399 aaKnown RBP10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 CKMT2P17540 419 aa10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 BMP6P22004 513 aa10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 NUDT1P36639 197 aa10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 CENPCQ03188 943 aa10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 CNTN1Q12860 1018 aa10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 PAK1Q13153 545 aa10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 NME3Q13232 169 aa10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 ZNF177Q13360 481 aaPredicted RBP10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 PDCLQ13371 301 aa10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 EIF4EBP2Q13542 120 aaPredicted RBP10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 AUHQ13825 339 aaKnown RBP10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 MORC3Q14149 939 aa10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 DLG2Q15700 870 aa10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 KIF26BQ2KJY2 2108 aa10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 SETMARQ53H47 684 aaPredicted RBP10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 HS1BP3Q53T59 392 aa10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 EFHC1Q5JVL4 640 aa10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 CXorf57Q6NSI4 855 aaKnown RBP10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 FBXL19Q6PCT2 694 aa10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 GJB7Q6PEY0 223 aa10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 ENOSF1Q7L5Y1 443 aa10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 SPATS2Q86XZ4 545 aaKnown RBP10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 ELOA2Q8IYF1 753 aaPredicted RBP10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 TSC1Q92574 1164 aa10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 KLHDC7BQ96G42 594 aa10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 PPP1R13BQ96KQ4 1090 aa10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 FAM81BQ96LP2 452 aa10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 CRACR2AQ9BSW2 395 aa10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 SIK2Q9H0K1 926 aa10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 ARHGAP20Q9P2F6 1191 aa10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 VPS28Q9UK41 221 aa10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 DMTF1Q9Y222 760 aa10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 CA5BQ9Y2D0 317 aa10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 FARP1Q9Y4F1 1045 aaPredicted RBP10.86□□□□□ -0.67
CHMP2A-202ENST00000596708 PTPRQQ9UMZ3 2332 aa10.85□□□□□ -0.67
CHMP2A-202ENST00000596708 PRAMEF26H0Y7S4 382 aa10.85□□□□□ -0.67
CHMP2A-202ENST00000596708 MCF2LO15068 1137 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms