RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 FEM1AQ9BSK4 669 aa13.42□□□□□ -0.26
LIG1-212ENST00000596549 IL21RQ9HBE5 538 aa13.42□□□□□ -0.26
LIG1-212ENST00000596549 SGK2Q9HBY8 427 aa13.42□□□□□ -0.26
LIG1-212ENST00000596549 FBXL12Q9NXK8 326 aa13.42□□□□□ -0.26
LIG1-212ENST00000596549 MPP6Q9NZW5 540 aa13.42□□□□□ -0.26
LIG1-212ENST00000596549 ZNF212Q9UDV6 495 aa13.42□□□□□ -0.26
LIG1-212ENST00000596549 ADAMTS1Q9UHI8 967 aa13.42□□□□□ -0.26
LIG1-212ENST00000596549 ANGPTL2Q9UKU9 493 aa13.42□□□□□ -0.26
LIG1-212ENST00000596549 SCML1Q9UN30 329 aa13.42□□□□□ -0.26
LIG1-212ENST00000596549 NEU3Q9UQ49 428 aa13.42□□□□□ -0.26
LIG1-212ENST00000596549 PTPRBP23467 1997 aa13.41□□□□□ -0.26
LIG1-212ENST00000596549 COL5A1P20908 1838 aaPredicted RBP13.41□□□□□ -0.26
LIG1-212ENST00000596549 LRRC10BA6NIK2 292 aa13.41□□□□□ -0.26
LIG1-212ENST00000596549 E9PAM4 449 aa13.41□□□□□ -0.26
LIG1-212ENST00000596549 ATP9BO43861 1147 aa13.41□□□□□ -0.26
LIG1-212ENST00000596549 SNAP91O60641 907 aa13.41□□□□□ -0.26
LIG1-212ENST00000596549 ENDOD1O94919 500 aa13.41□□□□□ -0.26
LIG1-212ENST00000596549 F9P00740 461 aa13.41□□□□□ -0.26
LIG1-212ENST00000596549 VASPP50552 380 aaPredicted RBP13.41□□□□□ -0.26
LIG1-212ENST00000596549 OXCT1P55809 520 aa13.41□□□□□ -0.26
LIG1-212ENST00000596549 FAM193AP78312 1265 aa13.41□□□□□ -0.26
LIG1-212ENST00000596549 ATP11AP98196 1134 aa13.41□□□□□ -0.26
LIG1-212ENST00000596549 UBXN1Q04323 297 aa13.41□□□□□ -0.26
LIG1-212ENST00000596549 SULT2A1Q06520 285 aa13.41□□□□□ -0.26
LIG1-212ENST00000596549 ELAVL3Q14576 367 aaKnown RBP13.41□□□□□ -0.26
LIG1-212ENST00000596549 C15orf59Q2T9L4 293 aaPredicted RBP13.41□□□□□ -0.26
LIG1-212ENST00000596549 ANO6Q4KMQ2 910 aa13.41□□□□□ -0.26
LIG1-212ENST00000596549 KIAA0895LQ68EN5 471 aa13.41□□□□□ -0.26
LIG1-212ENST00000596549 Q6ZVU0 165 aa13.41□□□□□ -0.26
LIG1-212ENST00000596549 TFAP2DQ7Z6R9 452 aa13.41□□□□□ -0.26
LIG1-212ENST00000596549 HDDC3Q8N4P3 179 aa13.41□□□□□ -0.26
LIG1-212ENST00000596549 SH2D3CQ8N5H7 860 aa13.41□□□□□ -0.26
LIG1-212ENST00000596549 NEK11Q8NG66 645 aa13.41□□□□□ -0.26
LIG1-212ENST00000596549 FAM131CQ96AQ9 280 aa13.41□□□□□ -0.26
LIG1-212ENST00000596549 CAMK1GQ96NX5 476 aa13.41□□□□□ -0.26
LIG1-212ENST00000596549 NEUROG2Q9H2A3 272 aa13.41□□□□□ -0.26
LIG1-212ENST00000596549 EBF2Q9HAK2 575 aa13.41□□□□□ -0.26
LIG1-212ENST00000596549 TM9SF3Q9HD45 589 aa13.41□□□□□ -0.26
LIG1-212ENST00000596549 SLC25A13Q9UJS0 675 aa13.41□□□□□ -0.26
LIG1-212ENST00000596549 VPS28Q9UK41 221 aa13.41□□□□□ -0.26
LIG1-212ENST00000596549 FZD4Q9ULV1 537 aa13.41□□□□□ -0.26
LIG1-212ENST00000596549 SPEGQ15772 3267 aa13.41□□□□□ -0.26
LIG1-212ENST00000596549 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.4□□□□□ -0.26
LIG1-212ENST00000596549 A0A0D9SEW6 157 aa13.4□□□□□ -0.26
LIG1-212ENST00000596549 SPAARA0A1B0GVQ0 90 aa13.4□□□□□ -0.26
LIG1-212ENST00000596549 A0A1B0GVT2 93 aa13.4□□□□□ -0.26
LIG1-212ENST00000596549 TCRBV5S1A1TA0A578 114 aa13.4□□□□□ -0.26
LIG1-212ENST00000596549 C2CD4BA6NLJ0 364 aa13.4□□□□□ -0.26
LIG1-212ENST00000596549 DRGXA6NNA5 263 aa13.4□□□□□ -0.26
LIG1-212ENST00000596549 PLK4O00444 970 aa13.4□□□□□ -0.26
LIG1-212ENST00000596549 RNASEH1O60930 286 aaKnown RBP13.4□□□□□ -0.26
LIG1-212ENST00000596549 RNASEH2AO75792 299 aaKnown RBP13.4□□□□□ -0.26
LIG1-212ENST00000596549 FSBPO95073 299 aa13.4□□□□□ -0.26
LIG1-212ENST00000596549 RHOCP08134 193 aa13.4□□□□□ -0.26
LIG1-212ENST00000596549 SRCP12931 536 aa13.4□□□□□ -0.26
LIG1-212ENST00000596549 SLC8A1P32418 973 aa13.4□□□□□ -0.26
LIG1-212ENST00000596549 GALCP54803 685 aa13.4□□□□□ -0.26
LIG1-212ENST00000596549 ADPRHP54922 357 aa13.4□□□□□ -0.26
LIG1-212ENST00000596549 FOXC1Q12948 553 aa13.4□□□□□ -0.26
LIG1-212ENST00000596549 ZNF177Q13360 481 aaPredicted RBP13.4□□□□□ -0.26
LIG1-212ENST00000596549 CDO1Q16878 200 aa13.4□□□□□ -0.26
LIG1-212ENST00000596549 CLEC16AQ2KHT3 1053 aa13.4□□□□□ -0.26
LIG1-212ENST00000596549 CCDC14Q49A88 953 aa13.4□□□□□ -0.26
LIG1-212ENST00000596549 MANEALQ5VSG8 457 aa13.4□□□□□ -0.26
LIG1-212ENST00000596549 NCEH1Q6PIU2 408 aa13.4□□□□□ -0.26
LIG1-212ENST00000596549 TRIM72Q6ZMU5 477 aa13.4□□□□□ -0.26
LIG1-212ENST00000596549 SND1Q7KZF4 910 aaKnown RBP eCLIP13.4□□□□□ -0.26
LIG1-212ENST00000596549 MON1BQ7L1V2 547 aa13.4□□□□□ -0.26
LIG1-212ENST00000596549 DCAF4L2Q8NA75 395 aa13.4□□□□□ -0.26
LIG1-212ENST00000596549 ANKRD20A12PQ8NF67 263 aa13.4□□□□□ -0.26
LIG1-212ENST00000596549 RXFP2Q8WXD0 754 aa13.4□□□□□ -0.26
LIG1-212ENST00000596549 PCMTD1Q96MG8 357 aaPredicted RBP13.4□□□□□ -0.26
LIG1-212ENST00000596549 FUCA2Q9BTY2 467 aa13.4□□□□□ -0.26
LIG1-212ENST00000596549 ZDHHC5Q9C0B5 715 aa13.4□□□□□ -0.26
LIG1-212ENST00000596549 OSGEPQ9NPF4 335 aa13.4□□□□□ -0.26
LIG1-212ENST00000596549 VPS51Q9UID3 782 aa13.4□□□□□ -0.26
LIG1-212ENST00000596549 SARDHQ9UL12 918 aa13.4□□□□□ -0.26
LIG1-212ENST00000596549 HS3ST2Q9Y278 367 aa13.4□□□□□ -0.26
LIG1-212ENST00000596549 FNDC3AQ9Y2H6 1198 aaKnown RBP13.4□□□□□ -0.26
LIG1-212ENST00000596549 CACNA1BQ00975 2339 aa13.4□□□□□ -0.26
LIG1-212ENST00000596549 KMT2BQ9UMN6 2715 aaPredicted RBP13.4□□□□□ -0.27
LIG1-212ENST00000596549 WDFY3Q8IZQ1 3526 aa13.39□□□□□ -0.27
LIG1-212ENST00000596549 FAM47DPA6NHR8 397 aa13.39□□□□□ -0.27
LIG1-212ENST00000596549 RNF103O00237 685 aa13.39□□□□□ -0.27
LIG1-212ENST00000596549 TEX33O43247 280 aa13.39□□□□□ -0.27
LIG1-212ENST00000596549 SH3BP5O60239 455 aa13.39□□□□□ -0.27
LIG1-212ENST00000596549 ADH1BP00325 375 aa13.39□□□□□ -0.27
LIG1-212ENST00000596549 MT-CO1P00395 513 aa13.39□□□□□ -0.27
LIG1-212ENST00000596549 IL1BP01584 269 aa13.39□□□□□ -0.27
LIG1-212ENST00000596549 CTSLP07711 333 aa13.39□□□□□ -0.27
LIG1-212ENST00000596549 SPINK2P20155 84 aa13.39□□□□□ -0.27
LIG1-212ENST00000596549 C5AR1P21730 350 aa13.39□□□□□ -0.27
LIG1-212ENST00000596549 GLDCP23378 1020 aa13.39□□□□□ -0.27
LIG1-212ENST00000596549 CD27P26842 260 aa13.39□□□□□ -0.27
LIG1-212ENST00000596549 NNMTP40261 264 aa13.39□□□□□ -0.27
LIG1-212ENST00000596549 GRIA4P48058 902 aa13.39□□□□□ -0.27
LIG1-212ENST00000596549 CSNK1EP49674 416 aaKnown RBP13.39□□□□□ -0.27
LIG1-212ENST00000596549 AFF3P51826 1226 aaKnown RBP13.39□□□□□ -0.27
LIG1-212ENST00000596549 HDAC4P56524 1084 aa13.39□□□□□ -0.27
LIG1-212ENST00000596549 PPP2CBP62714 309 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms