RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 MAP3K13O43283 966 aa11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 CBFA2T2O43439 604 aa11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 SNAP91O60641 907 aa11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 LRIG2O94898 1065 aa11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 TPM3P06753 285 aa11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 RHOCP08134 193 aa11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 ZNF806P0C7X5 589 aa11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 GLDCP23378 1020 aa11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 DHPSP49366 369 aaPredicted RBP11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 VASPP50552 380 aaPredicted RBP11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 OXCT1P55809 520 aa11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 ST8SIA6P61647 398 aa11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 RPS14P62263 151 aaKnown RBP11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 RPL6Q02878 288 aaKnown RBP11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 SEMA3BQ13214 749 aa11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 BYSLQ13895 437 aaKnown RBP11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 ARL13BQ3SXY8 428 aa11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 TCEAL6Q6IPX3 200 aa11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 PRR23CQ6ZRP0 262 aa11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 CYP4V2Q6ZWL3 525 aaPredicted RBP11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 LPCAT2Q7L5N7 544 aa11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 TMC6Q7Z403 805 aa11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 SETD3Q86TU7 594 aaPredicted RBP11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 NLRP14Q86W24 1093 aa11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 DEFB119Q8N690 84 aa11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 GPR161Q8N6U8 529 aaKnown RBP11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 OR7D4Q8NG98 312 aa11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 PRCCQ92733 491 aaPredicted RBP11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 PTPRN2Q92932 1015 aa11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 TCEAL3Q969E4 200 aa11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 ZNF653Q96CK0 615 aa11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 TOE1Q96GM8 510 aaKnown RBP11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 PEBP4Q96S96 227 aa11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 FAM129BQ96TA1 746 aa11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 DNAJC7Q99615 494 aa11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 ZYG11BQ9C0D3 744 aa11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 RSPH9Q9H1X1 276 aaPredicted RBP11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 FBRSQ9HAH7 460 aa11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 RXFP3Q9NSD7 469 aa11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 TMEM74BQ9NUR3 256 aa11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 WSB2Q9NYS7 404 aaPredicted RBP11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 SUN2Q9UH99 717 aa11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 VPS51Q9UID3 782 aa11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 VPS28Q9UK41 221 aa11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 FZD10Q9ULW2 581 aa11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 BZW2Q9Y6E2 419 aaKnown RBP11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 CABIN1Q9Y6J0 2220 aa11.28□□□□□ -0.6
SHKBP1-206ENST00000595523 EDDM13A0A1B0GTR0 161 aa11.27□□□□□ -0.61
SHKBP1-206ENST00000595523 ILVBLA1L0T0 632 aa11.27□□□□□ -0.61
SHKBP1-206ENST00000595523 ANKRD62A6NC57 917 aa11.27□□□□□ -0.61
SHKBP1-206ENST00000595523 PATE3B3GLJ2 98 aa11.27□□□□□ -0.61
SHKBP1-206ENST00000595523 ZBTB24O43167 697 aaPredicted RBP11.27□□□□□ -0.61
SHKBP1-206ENST00000595523 ATP9BO43861 1147 aa11.27□□□□□ -0.61
SHKBP1-206ENST00000595523 GDF9O60383 454 aa11.27□□□□□ -0.61
SHKBP1-206ENST00000595523 MT-CO1P00395 513 aa11.27□□□□□ -0.61
SHKBP1-206ENST00000595523 ITPKAP23677 461 aa11.27□□□□□ -0.61
SHKBP1-206ENST00000595523 PSMA2P25787 234 aa11.27□□□□□ -0.61
SHKBP1-206ENST00000595523 CD6P30203 668 aa11.27□□□□□ -0.61
SHKBP1-206ENST00000595523 OR1E1P30953 314 aa11.27□□□□□ -0.61
SHKBP1-206ENST00000595523 SULT2A1Q06520 285 aa11.27□□□□□ -0.61
SHKBP1-206ENST00000595523 ASTE1Q2TB18 679 aaPredicted RBP11.27□□□□□ -0.61
SHKBP1-206ENST00000595523 SPDYCQ5MJ68 293 aa11.27□□□□□ -0.61
SHKBP1-206ENST00000595523 C6orf118Q5T5N4 469 aa11.27□□□□□ -0.61
SHKBP1-206ENST00000595523 DAB2IPQ5VWQ8 1189 aa11.27□□□□□ -0.61
SHKBP1-206ENST00000595523 PEAR1Q5VY43 1037 aaPredicted RBP11.27□□□□□ -0.61
SHKBP1-206ENST00000595523 SCYL2Q6P3W7 929 aa11.27□□□□□ -0.61
SHKBP1-206ENST00000595523 SLC36A4Q6YBV0 504 aa11.27□□□□□ -0.61
SHKBP1-206ENST00000595523 CYP2U1Q7Z449 544 aa11.27□□□□□ -0.61
SHKBP1-206ENST00000595523 SLFN11Q7Z7L1 901 aa11.27□□□□□ -0.61
SHKBP1-206ENST00000595523 DRC7Q8IY82 874 aa11.27□□□□□ -0.61
SHKBP1-206ENST00000595523 SH2D3CQ8N5H7 860 aa11.27□□□□□ -0.61
SHKBP1-206ENST00000595523 DCAF4L2Q8NA75 395 aa11.27□□□□□ -0.61
SHKBP1-206ENST00000595523 FNIP1Q8TF40 1166 aa11.27□□□□□ -0.61
SHKBP1-206ENST00000595523 RMDN1Q96DB5 314 aa11.27□□□□□ -0.61
SHKBP1-206ENST00000595523 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.27□□□□□ -0.61
SHKBP1-206ENST00000595523 THAP2Q9H0W7 228 aa11.27□□□□□ -0.61
SHKBP1-206ENST00000595523 MUC3BQ9H195 1237 aa11.27□□□□□ -0.61
SHKBP1-206ENST00000595523 VPS45Q9NRW7 570 aa11.27□□□□□ -0.61
SHKBP1-206ENST00000595523 TMEM248Q9NWD8 314 aa11.27□□□□□ -0.61
SHKBP1-206ENST00000595523 SERGEFQ9UGK8 458 aa11.27□□□□□ -0.61
SHKBP1-206ENST00000595523 HS3ST2Q9Y278 367 aa11.27□□□□□ -0.61
SHKBP1-206ENST00000595523 ATXN2Q99700 1313 aaKnown RBP11.27□□□□□ -0.61
SHKBP1-206ENST00000595523 TARSL2A2RTX5 802 aaKnown RBP11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 K7ERQ8 282 aa11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 SMAD6O43541 496 aaKnown RBP11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 LRCH4O75427 683 aa11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 ZMPSTE24O75844 475 aa11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 MYBL1P10243 752 aa11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 SRCP12931 536 aa11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 RHOQP17081 205 aa11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 L1CAMP32004 1257 aa11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 EIF4A3P38919 411 aaKnown RBP11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 GNA12Q03113 381 aa11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 LMNB2Q03252 620 aa11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 ZBTB16Q05516 673 aa11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 ZNF33AQ06730 810 aa11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 TBX2Q13207 712 aaPredicted RBP11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 TRIM14Q14142 442 aa11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 CA9Q16790 459 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms