RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 ZC3H7BQ9UGR2 993 aaKnown RBP17.46■□□□□ 0.39
SHKBP1-205ENST00000594973 DSEQ9UL01 958 aa17.46■□□□□ 0.39
SHKBP1-205ENST00000594973 GRID1Q9ULK0 1009 aa17.46■□□□□ 0.39
SHKBP1-205ENST00000594973 SNX10Q9Y5X0 201 aa17.46■□□□□ 0.39
SHKBP1-205ENST00000594973 WASF2Q9Y6W5 498 aa17.46■□□□□ 0.39
SHKBP1-205ENST00000594973 DDHD2O94830 711 aa17.46■□□□□ 0.38
SHKBP1-205ENST00000594973 OR4Q2P0C623 313 aa17.46■□□□□ 0.38
SHKBP1-205ENST00000594973 RPA3P35244 121 aaPredicted RBP17.46■□□□□ 0.38
SHKBP1-205ENST00000594973 HPCAP84074 193 aa17.46■□□□□ 0.38
SHKBP1-205ENST00000594973 BSPRYQ5W0U4 402 aa17.46■□□□□ 0.38
SHKBP1-205ENST00000594973 FAM91A1Q658Y4 838 aa17.46■□□□□ 0.38
SHKBP1-205ENST00000594973 DCLRE1AQ6PJP8 1040 aa17.46■□□□□ 0.38
SHKBP1-205ENST00000594973 ADGRD1Q6QNK2 874 aa17.46■□□□□ 0.38
SHKBP1-205ENST00000594973 NET1Q7Z628 596 aaPredicted RBP17.46■□□□□ 0.38
SHKBP1-205ENST00000594973 THEM5Q8N1Q8 247 aa17.46■□□□□ 0.38
SHKBP1-205ENST00000594973 UROC1Q96N76 676 aa17.46■□□□□ 0.38
SHKBP1-205ENST00000594973 COLEC11Q9BWP8 271 aa17.46■□□□□ 0.38
SHKBP1-205ENST00000594973 SSU72Q9NP77 194 aaKnown RBP17.46■□□□□ 0.38
SHKBP1-205ENST00000594973 NPHS2Q9NP85 383 aa17.46■□□□□ 0.38
SHKBP1-205ENST00000594973 RGS18Q9NS28 235 aa17.46■□□□□ 0.38
SHKBP1-205ENST00000594973 FBXW11Q9UKB1 542 aa17.46■□□□□ 0.38
SHKBP1-205ENST00000594973 MAD1L1Q9Y6D9 718 aa17.46■□□□□ 0.38
SHKBP1-205ENST00000594973 A0A1W2PQ45 241 aaPredicted RBP17.45■□□□□ 0.38
SHKBP1-205ENST00000594973 A0A1W2PQY0 241 aa17.45■□□□□ 0.38
SHKBP1-205ENST00000594973 GOLGA8RI6L899 631 aa17.45■□□□□ 0.38
SHKBP1-205ENST00000594973 ETS2P15036 469 aa17.45■□□□□ 0.38
SHKBP1-205ENST00000594973 CA4P22748 312 aa17.45■□□□□ 0.38
SHKBP1-205ENST00000594973 RPL26P61254 145 aaKnown RBP17.45■□□□□ 0.38
SHKBP1-205ENST00000594973 AP2B1P63010 937 aa17.45■□□□□ 0.38
SHKBP1-205ENST00000594973 TSPY1Q01534 308 aa17.45■□□□□ 0.38
SHKBP1-205ENST00000594973 DPYSQ14117 519 aa17.45■□□□□ 0.38
SHKBP1-205ENST00000594973 ADGRG6Q86SQ4 1221 aa17.45■□□□□ 0.38
SHKBP1-205ENST00000594973 PRPF39Q86UA1 669 aaKnown RBP17.45■□□□□ 0.38
SHKBP1-205ENST00000594973 DCAKDQ8WVC6 231 aa17.45■□□□□ 0.38
SHKBP1-205ENST00000594973 DGCR14Q96DF8 476 aaKnown RBP17.45■□□□□ 0.38
SHKBP1-205ENST00000594973 P2RY11Q96G91 374 aa17.45■□□□□ 0.38
SHKBP1-205ENST00000594973 SUSD3Q96L08 255 aa17.45■□□□□ 0.38
SHKBP1-205ENST00000594973 KLF6Q99612 283 aaPredicted RBP17.45■□□□□ 0.38
SHKBP1-205ENST00000594973 PRDM12Q9H4Q4 367 aa17.45■□□□□ 0.38
SHKBP1-205ENST00000594973 WDCPQ9H6R7 721 aa17.45■□□□□ 0.38
SHKBP1-205ENST00000594973 STARD7Q9NQZ5 370 aa17.45■□□□□ 0.38
SHKBP1-205ENST00000594973 IKBKGQ9Y6K9 419 aa17.45■□□□□ 0.38
SHKBP1-205ENST00000594973 TDRD15B5MCY1 1934 aaKnown RBP17.45■□□□□ 0.38
SHKBP1-205ENST00000594973 A0A0A0MRY4 1105 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 C9IYK1 514 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 RNF103O00237 685 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 TOMM70O94826 608 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 INHAP05111 366 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 ERCC2P18074 760 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 TPI1P60174 286 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 YWHAHQ04917 246 aaPredicted RBP17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 RASA2Q15283 850 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 TRMT5Q32P41 509 aaKnown RBP17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 PLEKHG4Q58EX7 1191 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 CLLU1OSQ5K130 101 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 TRAF7Q6Q0C0 670 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 RINLQ6ZS11 566 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 SLC24A5Q71RS6 500 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 CTAGE3PQ8IX95 158 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 ALDH16A1Q8IZ83 802 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 MPP5Q8N3R9 675 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 LINC01599Q8WXQ3 324 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 RNF34Q969K3 372 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 SPATA13Q96N96 652 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 SLC9A7Q96T83 725 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 PKMYT1Q99640 499 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 DHRS4Q9BTZ2 278 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 TKTL2Q9H0I9 626 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 GPAMQ9HCL2 828 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 PIH1D1Q9NWS0 290 aaKnown RBP17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 NDE1Q9NXR1 346 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 KANSL3Q9P2N6 904 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 WDR37Q9Y2I8 494 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 PRG3Q9Y2Y8 225 aaPredicted RBP17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 NUMBLQ9Y6R0 609 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 TMEM221A6NGB7 291 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 MOXD2PA6NHM9 499 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 HACD1B0YJ81 288 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 RNASEH1O60930 286 aaKnown RBP17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 PGM1P36871 562 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 MAGEA6P43360 314 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 OR1G1P47890 313 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 CDC16Q13042 620 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 ARL13BQ3SXY8 428 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 C6orf163Q5TEZ5 329 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 C4orf22Q6V702 233 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 ZNF534Q76KX8 674 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 COLGALT1Q8NBJ5 622 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 MPP4Q96JB8 637 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 FRMD8Q9BZ67 464 aaPredicted RBP17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 IQCGQ9H095 443 aaKnown RBP17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 CREBZFQ9NS37 354 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 RHBDL2Q9NX52 303 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 FETUBQ9UGM5 382 aa17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 MTO1Q9Y2Z2 717 aaKnown RBP17.44■□□□□ 0.38
SHKBP1-205ENST00000594973 KCNK1O00180 336 aa17.43■□□□□ 0.38
SHKBP1-205ENST00000594973 DCLK1O15075 740 aa17.43■□□□□ 0.38
SHKBP1-205ENST00000594973 ESRRAP11474 423 aaPredicted RBP17.43■□□□□ 0.38
SHKBP1-205ENST00000594973 TSHRP16473 764 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms