RNA–Protein interactions for RNA: ENST00000594497.1

CAPN12-203, Transcript of calpain 12, humanhuman

TSL 3

Gene CAPN12, Length 526 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-203ENST00000594497 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.64■□□□□ 0.25
CAPN12-203ENST00000594497 M0QYT0 321 aa16.64■□□□□ 0.25
CAPN12-203ENST00000594497 FOXN3O00409 490 aaPredicted RBP16.64■□□□□ 0.25
CAPN12-203ENST00000594497 WNT1P04628 370 aa16.64■□□□□ 0.25
CAPN12-203ENST00000594497 NOS2P35228 1153 aa16.64■□□□□ 0.25
CAPN12-203ENST00000594497 DRD3P35462 400 aa16.64■□□□□ 0.25
CAPN12-203ENST00000594497 CLCN1P35523 988 aa16.64■□□□□ 0.25
CAPN12-203ENST00000594497 ZNF177Q13360 481 aaPredicted RBP16.64■□□□□ 0.25
CAPN12-203ENST00000594497 ACCSLQ4AC99 568 aa16.64■□□□□ 0.25
CAPN12-203ENST00000594497 PTPN20Q4JDL3 420 aa16.64■□□□□ 0.25
CAPN12-203ENST00000594497 SLC45A4Q5BKX6 768 aa16.64■□□□□ 0.25
CAPN12-203ENST00000594497 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.64■□□□□ 0.25
CAPN12-203ENST00000594497 ZDHHC17Q8IUH5 632 aa16.64■□□□□ 0.25
CAPN12-203ENST00000594497 FAM114A1Q8IWE2 563 aa16.64■□□□□ 0.25
CAPN12-203ENST00000594497 GALNT15Q8N3T1 639 aa16.64■□□□□ 0.25
CAPN12-203ENST00000594497 ZNF397Q8NF99 534 aaPredicted RBP16.64■□□□□ 0.25
CAPN12-203ENST00000594497 OR8D1Q8WZ84 308 aa16.64■□□□□ 0.25
CAPN12-203ENST00000594497 ALG14Q96F25 216 aa16.64■□□□□ 0.25
CAPN12-203ENST00000594497 SERAC1Q96JX3 654 aa16.64■□□□□ 0.25
CAPN12-203ENST00000594497 KDM4CQ9H3R0 1056 aa16.64■□□□□ 0.25
CAPN12-203ENST00000594497 RRN3Q9NYV6 651 aa16.64■□□□□ 0.25
CAPN12-203ENST00000594497 FTSJ1Q9UET6 329 aa16.64■□□□□ 0.25
CAPN12-203ENST00000594497 VPS28Q9UK41 221 aa16.64■□□□□ 0.25
CAPN12-203ENST00000594497 HS3ST4Q9Y661 456 aa16.64■□□□□ 0.25
CAPN12-203ENST00000594497 DOCK9Q9BZ29 2069 aa16.64■□□□□ 0.25
CAPN12-203ENST00000594497 CELSR3Q9NYQ7 3312 aa16.64■□□□□ 0.25
CAPN12-203ENST00000594497 ADAMTS20P59510 1910 aa16.63■□□□□ 0.25
CAPN12-203ENST00000594497 TBC1D3DA0A087WVF3 549 aa16.63■□□□□ 0.25
CAPN12-203ENST00000594497 TBC1D3IA0A087WXS9 549 aa16.63■□□□□ 0.25
CAPN12-203ENST00000594497 TBC1D3EA0A087X179 549 aa16.63■□□□□ 0.25
CAPN12-203ENST00000594497 TBC1D3KA0A087X1G2 549 aa16.63■□□□□ 0.25
CAPN12-203ENST00000594497 A0A1W2PR77 199 aa16.63■□□□□ 0.25
CAPN12-203ENST00000594497 TBC1D3FA6NER0 549 aaPredicted RBP16.63■□□□□ 0.25
CAPN12-203ENST00000594497 TBC1D3LB9A6J9 549 aa16.63■□□□□ 0.25
CAPN12-203ENST00000594497 YKT6O15498 198 aa16.63■□□□□ 0.25
CAPN12-203ENST00000594497 ATP9BO43861 1147 aa16.63■□□□□ 0.25
CAPN12-203ENST00000594497 PAGE1O75459 146 aa16.63■□□□□ 0.25
CAPN12-203ENST00000594497 CLDN11O75508 207 aa16.63■□□□□ 0.25
CAPN12-203ENST00000594497 TBC1D3HP0C7X1 549 aa16.63■□□□□ 0.25
CAPN12-203ENST00000594497 PNMA6AP0CW24 399 aaPredicted RBP16.63■□□□□ 0.25
CAPN12-203ENST00000594497 GGCXP38435 758 aa16.63■□□□□ 0.25
CAPN12-203ENST00000594497 IRAK1P51617 712 aa16.63■□□□□ 0.25
CAPN12-203ENST00000594497 CDH4P55283 916 aa16.63■□□□□ 0.25
CAPN12-203ENST00000594497 BPIFB4P59827 614 aa16.63■□□□□ 0.25
CAPN12-203ENST00000594497 PPP2CBP62714 309 aa16.63■□□□□ 0.25
CAPN12-203ENST00000594497 PPP2CAP67775 309 aa16.63■□□□□ 0.25
CAPN12-203ENST00000594497 FAM46CQ5VWP2 391 aa16.63■□□□□ 0.25
CAPN12-203ENST00000594497 TBC1D3GQ6DHY5 549 aa16.63■□□□□ 0.25
CAPN12-203ENST00000594497 TBC1D3CQ6IPX1 549 aa16.63■□□□□ 0.25
CAPN12-203ENST00000594497 FAM71AQ8IYT1 594 aa16.63■□□□□ 0.25
CAPN12-203ENST00000594497 TBC1D3Q8IZP1 549 aaPredicted RBP16.63■□□□□ 0.25
CAPN12-203ENST00000594497 OR52K2Q8NGK3 314 aa16.63■□□□□ 0.25
CAPN12-203ENST00000594497 FAM131CQ96AQ9 280 aa16.63■□□□□ 0.25
CAPN12-203ENST00000594497 SIK2Q9H0K1 926 aa16.63■□□□□ 0.25
CAPN12-203ENST00000594497 PLCB1Q9NQ66 1216 aa16.63■□□□□ 0.25
CAPN12-203ENST00000594497 GDF3Q9NR23 364 aa16.63■□□□□ 0.25
CAPN12-203ENST00000594497 LHX6Q9UPM6 363 aa16.63■□□□□ 0.25
CAPN12-203ENST00000594497 DOCK4Q8N1I0 1966 aa16.63■□□□□ 0.25
CAPN12-203ENST00000594497 GOLGA4Q13439 2230 aaKnown RBP16.62■□□□□ 0.25
CAPN12-203ENST00000594497 C1QTNF3-AMACRE9PGA6 284 aa16.62■□□□□ 0.25
CAPN12-203ENST00000594497 PLK4O00444 970 aa16.62■□□□□ 0.25
CAPN12-203ENST00000594497 WNT9AO14904 365 aa16.62■□□□□ 0.25
CAPN12-203ENST00000594497 ALOX15BO15296 676 aa16.62■□□□□ 0.25
CAPN12-203ENST00000594497 SLC7A4O43246 635 aa16.62■□□□□ 0.25
CAPN12-203ENST00000594497 LATO43561 262 aa16.62■□□□□ 0.25
CAPN12-203ENST00000594497 PLRG1O43660 514 aaKnown RBP16.62■□□□□ 0.25
CAPN12-203ENST00000594497 METAP1P53582 386 aa16.62■□□□□ 0.25
CAPN12-203ENST00000594497 DLG2Q15700 870 aa16.62■□□□□ 0.25
CAPN12-203ENST00000594497 C5orf22Q49AR2 442 aa16.62■□□□□ 0.25
CAPN12-203ENST00000594497 CCDC157Q569K6 752 aa16.62■□□□□ 0.25
CAPN12-203ENST00000594497 BRMS1LQ5PSV4 323 aa16.62■□□□□ 0.25
CAPN12-203ENST00000594497 PRAMEF14Q5SWL7 426 aa16.62■□□□□ 0.25
CAPN12-203ENST00000594497 OTUD1Q5VV17 481 aaPredicted RBP16.62■□□□□ 0.25
CAPN12-203ENST00000594497 PRPF39Q86UA1 669 aaKnown RBP16.62■□□□□ 0.25
CAPN12-203ENST00000594497 GATAD2AQ86YP4 633 aa16.62■□□□□ 0.25
CAPN12-203ENST00000594497 TMEM35BQ8NCS4 154 aa16.62■□□□□ 0.25
CAPN12-203ENST00000594497 MDM1Q8TC05 714 aa16.62■□□□□ 0.25
CAPN12-203ENST00000594497 NPY6RQ99463 290 aa16.62■□□□□ 0.25
CAPN12-203ENST00000594497 TKTL2Q9H0I9 626 aa16.62■□□□□ 0.25
CAPN12-203ENST00000594497 MUC3BQ9H195 1237 aa16.62■□□□□ 0.25
CAPN12-203ENST00000594497 PDCL3Q9H2J4 239 aa16.62■□□□□ 0.25
CAPN12-203ENST00000594497 NDST4Q9H3R1 872 aa16.62■□□□□ 0.25
CAPN12-203ENST00000594497 WDCPQ9H6R7 721 aa16.62■□□□□ 0.25
CAPN12-203ENST00000594497 PIGVQ9NUD9 493 aa16.62■□□□□ 0.25
CAPN12-203ENST00000594497 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.62■□□□□ 0.25
CAPN12-203ENST00000594497 STAP1Q9ULZ2 295 aa16.62■□□□□ 0.25
CAPN12-203ENST00000594497 TBC1D30Q9Y2I9 924 aa16.62■□□□□ 0.25
CAPN12-203ENST00000594497 OR51B4Q9Y5P0 310 aa16.62■□□□□ 0.25
CAPN12-203ENST00000594497 ZFYVE26Q68DK2 2539 aa16.62■□□□□ 0.25
CAPN12-203ENST00000594497 TLR4O00206 839 aa16.61■□□□□ 0.25
CAPN12-203ENST00000594497 MCF2LO15068 1137 aa16.61■□□□□ 0.25
CAPN12-203ENST00000594497 RTN2O75298 545 aa16.61■□□□□ 0.25
CAPN12-203ENST00000594497 ITGAVP06756 1048 aa16.61■□□□□ 0.25
CAPN12-203ENST00000594497 PRKCSHP14314 528 aaPredicted RBP16.61■□□□□ 0.25
CAPN12-203ENST00000594497 ZNF18P17022 549 aa16.61■□□□□ 0.25
CAPN12-203ENST00000594497 NUDT1P36639 197 aa16.61■□□□□ 0.25
CAPN12-203ENST00000594497 ARRB1P49407 418 aaPredicted RBP16.61■□□□□ 0.25
CAPN12-203ENST00000594497 CXCR3P49682 368 aa16.61■□□□□ 0.25
CAPN12-203ENST00000594497 SULT1E1P49888 294 aa16.61■□□□□ 0.25
CAPN12-203ENST00000594497 RNASE9P60153 205 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms