RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 RSPH9Q9H1X1 276 aaPredicted RBP13.61□□□□□ -0.23
H3F3B-213ENST00000593254 VPS16Q9H269 839 aa13.61□□□□□ -0.23
H3F3B-213ENST00000593254 GANQ9H2C0 597 aa13.61□□□□□ -0.23
H3F3B-213ENST00000593254 PDCL3Q9H2J4 239 aa13.61□□□□□ -0.23
H3F3B-213ENST00000593254 MTG2Q9H4K7 406 aa13.61□□□□□ -0.23
H3F3B-213ENST00000593254 RRN3Q9NYV6 651 aa13.61□□□□□ -0.23
H3F3B-213ENST00000593254 ERVW-1Q9UQF0 538 aa13.61□□□□□ -0.23
H3F3B-213ENST00000593254 TP53BP1Q12888 1972 aaPredicted RBP13.61□□□□□ -0.23
H3F3B-213ENST00000593254 M0QYT0 321 aa13.6□□□□□ -0.23
H3F3B-213ENST00000593254 ATXN7O15265 892 aaPredicted RBP13.6□□□□□ -0.23
H3F3B-213ENST00000593254 BCAT2O15382 392 aaPredicted RBP13.6□□□□□ -0.23
H3F3B-213ENST00000593254 SIN3BO75182 1162 aa13.6□□□□□ -0.23
H3F3B-213ENST00000593254 LSM8O95777 96 aaKnown RBP13.6□□□□□ -0.23
H3F3B-213ENST00000593254 DNTTP04053 509 aa13.6□□□□□ -0.23
H3F3B-213ENST00000593254 ACSL1P33121 698 aa13.6□□□□□ -0.23
H3F3B-213ENST00000593254 CTSOP43234 321 aaPredicted RBP13.6□□□□□ -0.23
H3F3B-213ENST00000593254 ABCG1P45844 678 aa13.6□□□□□ -0.23
H3F3B-213ENST00000593254 PLK1P53350 603 aa13.6□□□□□ -0.23
H3F3B-213ENST00000593254 ECT2LQ008S8 904 aa13.6□□□□□ -0.23
H3F3B-213ENST00000593254 NME3Q13232 169 aa13.6□□□□□ -0.23
H3F3B-213ENST00000593254 AUHQ13825 339 aaKnown RBP13.6□□□□□ -0.23
H3F3B-213ENST00000593254 TTC31Q49AM3 519 aaPredicted RBP13.6□□□□□ -0.23
H3F3B-213ENST00000593254 TAF3Q5VWG9 929 aa13.6□□□□□ -0.23
H3F3B-213ENST00000593254 ZNF776Q68DI1 518 aaPredicted RBP13.6□□□□□ -0.23
H3F3B-213ENST00000593254 CXorf57Q6NSI4 855 aaKnown RBP13.6□□□□□ -0.23
H3F3B-213ENST00000593254 FBXL22Q6P050 247 aa13.6□□□□□ -0.23
H3F3B-213ENST00000593254 NOP9Q86U38 636 aaKnown RBP13.6□□□□□ -0.23
H3F3B-213ENST00000593254 CIR1Q86X95 450 aaPredicted RBP13.6□□□□□ -0.23
H3F3B-213ENST00000593254 XYLT1Q86Y38 959 aa13.6□□□□□ -0.23
H3F3B-213ENST00000593254 APCDD1Q8J025 514 aa13.6□□□□□ -0.23
H3F3B-213ENST00000593254 PDCD7Q8N8D1 485 aaKnown RBP13.6□□□□□ -0.23
H3F3B-213ENST00000593254 RHBDD1Q8TEB9 315 aa13.6□□□□□ -0.23
H3F3B-213ENST00000593254 C18orf8Q96DM3 657 aa13.6□□□□□ -0.23
H3F3B-213ENST00000593254 PGAP3Q96FM1 320 aaPredicted RBP13.6□□□□□ -0.23
H3F3B-213ENST00000593254 RPRD1AQ96P16 312 aaPredicted RBP13.6□□□□□ -0.23
H3F3B-213ENST00000593254 NPY6RQ99463 290 aa13.6□□□□□ -0.23
H3F3B-213ENST00000593254 PIGVQ9NUD9 493 aa13.6□□□□□ -0.23
H3F3B-213ENST00000593254 METRNQ9UJH8 293 aa13.6□□□□□ -0.23
H3F3B-213ENST00000593254 BTBD3Q9Y2F9 522 aa13.6□□□□□ -0.23
H3F3B-213ENST00000593254 FAM149AA5PLN7 773 aa13.59□□□□□ -0.23
H3F3B-213ENST00000593254 E9PAM4 449 aa13.59□□□□□ -0.23
H3F3B-213ENST00000593254 GOLGA6L22H0YM25 854 aa13.59□□□□□ -0.23
H3F3B-213ENST00000593254 PAGE1O75459 146 aa13.59□□□□□ -0.23
H3F3B-213ENST00000593254 PLA2G2AP14555 144 aa13.59□□□□□ -0.23
H3F3B-213ENST00000593254 PDGFRAP16234 1089 aa13.59□□□□□ -0.23
H3F3B-213ENST00000593254 TFE3P19532 575 aaPredicted RBP13.59□□□□□ -0.23
H3F3B-213ENST00000593254 CXCR3P49682 368 aa13.59□□□□□ -0.23
H3F3B-213ENST00000593254 KLK7P49862 253 aa13.59□□□□□ -0.23
H3F3B-213ENST00000593254 NOMO3P69849 1222 aa13.59□□□□□ -0.23
H3F3B-213ENST00000593254 CENPCQ03188 943 aa13.59□□□□□ -0.23
H3F3B-213ENST00000593254 C5orf22Q49AR2 442 aa13.59□□□□□ -0.23
H3F3B-213ENST00000593254 C9orf64Q5T6V5 341 aa13.59□□□□□ -0.23
H3F3B-213ENST00000593254 ERICH1Q86X53 443 aa13.59□□□□□ -0.23
H3F3B-213ENST00000593254 ZNF677Q86XU0 584 aa13.59□□□□□ -0.23
H3F3B-213ENST00000593254 LSM14AQ8ND56 463 aaKnown RBP13.59□□□□□ -0.23
H3F3B-213ENST00000593254 IGSF8Q969P0 613 aa13.59□□□□□ -0.23
H3F3B-213ENST00000593254 BTBD1Q9H0C5 482 aa13.59□□□□□ -0.23
H3F3B-213ENST00000593254 PRORYQ9H606 182 aa13.59□□□□□ -0.23
H3F3B-213ENST00000593254 C6orf106Q9H6K1 298 aaPredicted RBP13.59□□□□□ -0.23
H3F3B-213ENST00000593254 ANO10Q9NW15 660 aa13.59□□□□□ -0.23
H3F3B-213ENST00000593254 FANCLQ9NW38 375 aa13.59□□□□□ -0.23
H3F3B-213ENST00000593254 ARHGEF38Q9NXL2 777 aa13.59□□□□□ -0.23
H3F3B-213ENST00000593254 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.59□□□□□ -0.238e-11■■□□□ 11.5
H3F3B-213ENST00000593254 EIF2B4Q9UI10 523 aaKnown RBP13.59□□□□□ -0.23
H3F3B-213ENST00000593254 SLCO3A1Q9UIG8 710 aa13.59□□□□□ -0.23
H3F3B-213ENST00000593254 NOCTQ9UK39 431 aaKnown RBP13.59□□□□□ -0.23
H3F3B-213ENST00000593254 VANGL2Q9ULK5 521 aa13.59□□□□□ -0.23
H3F3B-213ENST00000593254 STAP1Q9ULZ2 295 aa13.59□□□□□ -0.23
H3F3B-213ENST00000593254 SCML1Q9UN30 329 aa13.59□□□□□ -0.23
H3F3B-213ENST00000593254 DAAM1Q9Y4D1 1078 aa13.59□□□□□ -0.23
H3F3B-213ENST00000593254 HS3ST4Q9Y661 456 aa13.59□□□□□ -0.23
H3F3B-213ENST00000593254 EDDM13A0A1B0GTR0 161 aa13.58□□□□□ -0.24
H3F3B-213ENST00000593254 TARSL2A2RTX5 802 aaKnown RBP13.58□□□□□ -0.24
H3F3B-213ENST00000593254 TTC34A8MYJ7 566 aa13.58□□□□□ -0.24
H3F3B-213ENST00000593254 I6L893 689 aaPredicted RBP13.58□□□□□ -0.24
H3F3B-213ENST00000593254 EPHB6O15197 1021 aa13.58□□□□□ -0.24
H3F3B-213ENST00000593254 ADCY5O95622 1261 aa13.58□□□□□ -0.24
H3F3B-213ENST00000593254 SEMA4FO95754 770 aa13.58□□□□□ -0.24
H3F3B-213ENST00000593254 TPM2P07951 284 aa13.58□□□□□ -0.24
H3F3B-213ENST00000593254 MMEP08473 750 aa13.58□□□□□ -0.24
H3F3B-213ENST00000593254 MZF1P28698 734 aaPredicted RBP13.58□□□□□ -0.24
H3F3B-213ENST00000593254 FLT3P36888 993 aa13.58□□□□□ -0.24
H3F3B-213ENST00000593254 GGCXP38435 758 aa13.58□□□□□ -0.24
H3F3B-213ENST00000593254 SULT1E1P49888 294 aa13.58□□□□□ -0.24
H3F3B-213ENST00000593254 IRAK1P51617 712 aa13.58□□□□□ -0.24
H3F3B-213ENST00000593254 OXCT1P55809 520 aa13.58□□□□□ -0.24
H3F3B-213ENST00000593254 JAM2P57087 298 aa13.58□□□□□ -0.24
H3F3B-213ENST00000593254 RNASE9P60153 205 aaKnown RBP13.58□□□□□ -0.24
H3F3B-213ENST00000593254 POLR2FP61218 127 aaKnown RBP13.58□□□□□ -0.24
H3F3B-213ENST00000593254 MYL5Q02045 173 aa13.58□□□□□ -0.24
H3F3B-213ENST00000593254 SULT2A1Q06520 285 aa13.58□□□□□ -0.24
H3F3B-213ENST00000593254 STX1AQ16623 288 aa13.58□□□□□ -0.24
H3F3B-213ENST00000593254 SLC25A52Q3SY17 297 aa13.58□□□□□ -0.24
H3F3B-213ENST00000593254 C2CD6Q53TS8 623 aa13.58□□□□□ -0.24
H3F3B-213ENST00000593254 BRMS1LQ5PSV4 323 aa13.58□□□□□ -0.24
H3F3B-213ENST00000593254 FKBP15Q5T1M5 1219 aa13.58□□□□□ -0.24
H3F3B-213ENST00000593254 FAM102AQ5T9C2 384 aaPredicted RBP13.58□□□□□ -0.24
H3F3B-213ENST00000593254 RNF219Q5W0B1 726 aaPredicted RBP13.58□□□□□ -0.24
H3F3B-213ENST00000593254 SASS6Q6UVJ0 657 aa13.58□□□□□ -0.24
H3F3B-213ENST00000593254 USP30Q70CQ3 517 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms