RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 LRRC45Q96CN5 670 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 SNF8Q96H20 258 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 FERMT1Q9BQL6 677 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 SLC46A2Q9BY10 475 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 TRIM31Q9BZY9 425 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 C10orf88Q9H8K7 445 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 ARFGAP3Q9NP61 516 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 TMEM248Q9NWD8 314 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 HCFC1R1Q9NWW0 138 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 GRHL1Q9NZI5 618 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 NFU1Q9UMS0 254 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 CPQQ9Y646 472 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 DNAH14Q0VDD8 3507 aa13.82□□□□□ -0.2
VMP1-217ENST00000593168 GVINP1Q7Z2Y8 2422 aa13.81□□□□□ -0.2
VMP1-217ENST00000593168 GOLGA6L7A0A1B0GV03 622 aa13.81□□□□□ -0.2
VMP1-217ENST00000593168 KCNN4O15554 427 aa13.81□□□□□ -0.2
VMP1-217ENST00000593168 GCATO75600 419 aa13.81□□□□□ -0.2
VMP1-217ENST00000593168 MAP3K6O95382 1288 aa13.81□□□□□ -0.2
VMP1-217ENST00000593168 IFNB1P01574 187 aa13.81□□□□□ -0.2
VMP1-217ENST00000593168 CKMP06732 381 aa13.81□□□□□ -0.2
VMP1-217ENST00000593168 ETS1P14921 441 aa13.81□□□□□ -0.2
VMP1-217ENST00000593168 GJA1P17302 382 aa13.81□□□□□ -0.2
VMP1-217ENST00000593168 CORO1AP31146 461 aaKnown RBP13.81□□□□□ -0.2
VMP1-217ENST00000593168 ACTN2P35609 894 aa13.81□□□□□ -0.2
VMP1-217ENST00000593168 GDF10P55107 478 aa13.81□□□□□ -0.2
VMP1-217ENST00000593168 CAV1Q03135 178 aa13.81□□□□□ -0.2
VMP1-217ENST00000593168 CALCOCO2Q13137 446 aa13.81□□□□□ -0.2
VMP1-217ENST00000593168 TDGQ13569 410 aa13.81□□□□□ -0.2
VMP1-217ENST00000593168 HLTFQ14527 1009 aaKnown RBP eCLIP13.81□□□□□ -0.2
VMP1-217ENST00000593168 P3H1Q32P28 736 aa13.81□□□□□ -0.2
VMP1-217ENST00000593168 GPR158Q5T848 1215 aa13.81□□□□□ -0.2
VMP1-217ENST00000593168 AFMIDQ63HM1 303 aa13.81□□□□□ -0.2
VMP1-217ENST00000593168 GPR149Q86SP6 731 aa13.81□□□□□ -0.2
VMP1-217ENST00000593168 LRRC49Q8IUZ0 686 aa13.81□□□□□ -0.2
VMP1-217ENST00000593168 UMODL1-AS1Q8N2C9 162 aa13.81□□□□□ -0.2
VMP1-217ENST00000593168 FAM71DQ8N9W8 422 aa13.81□□□□□ -0.2
VMP1-217ENST00000593168 GLIS1Q8NBF1 620 aa13.81□□□□□ -0.2
VMP1-217ENST00000593168 HTR3CQ8WXA8 447 aa13.81□□□□□ -0.2
VMP1-217ENST00000593168 ART4Q93070 314 aa13.81□□□□□ -0.2
VMP1-217ENST00000593168 IGSF8Q969P0 613 aa13.81□□□□□ -0.2
VMP1-217ENST00000593168 HDAC11Q96DB2 347 aa13.81□□□□□ -0.2
VMP1-217ENST00000593168 RPRD1AQ96P16 312 aaPredicted RBP13.81□□□□□ -0.2
VMP1-217ENST00000593168 SFXN1Q9H9B4 322 aa13.81□□□□□ -0.2
VMP1-217ENST00000593168 ZDHHC18Q9NUE0 388 aa13.81□□□□□ -0.2
VMP1-217ENST00000593168 SMPD4Q9NXE4 827 aa13.81□□□□□ -0.2
VMP1-217ENST00000593168 PAK5Q9P286 719 aa13.81□□□□□ -0.2
VMP1-217ENST00000593168 AGO1Q9UL18 857 aaKnown RBP13.81□□□□□ -0.2
VMP1-217ENST00000593168 ARHGAP26Q9UNA1 814 aa13.81□□□□□ -0.2
VMP1-217ENST00000593168 DUSP12Q9UNI6 340 aa13.81□□□□□ -0.2
VMP1-217ENST00000593168 ZNF510Q9Y2H8 683 aa13.81□□□□□ -0.2
VMP1-217ENST00000593168 DMXL1Q9Y485 3027 aa13.81□□□□□ -0.2
VMP1-217ENST00000593168 DOCK4Q8N1I0 1966 aa13.8□□□□□ -0.2
VMP1-217ENST00000593168 DOCK6Q96HP0 2047 aa13.8□□□□□ -0.2
VMP1-217ENST00000593168 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.8□□□□□ -0.2
VMP1-217ENST00000593168 C5orf60A6NFR6 353 aa13.8□□□□□ -0.2
VMP1-217ENST00000593168 SPDYE4A6NLX3 237 aa13.8□□□□□ -0.2
VMP1-217ENST00000593168 DNALI1O14645 258 aaPredicted RBP13.8□□□□□ -0.2
VMP1-217ENST00000593168 MTSS1O43312 755 aa13.8□□□□□ -0.2
VMP1-217ENST00000593168 NARSO43776 548 aaKnown RBP13.8□□□□□ -0.2
VMP1-217ENST00000593168 GREM1O60565 184 aa13.8□□□□□ -0.2
VMP1-217ENST00000593168 SEC31AO94979 1220 aaKnown RBP13.8□□□□□ -0.2
VMP1-217ENST00000593168 ZSCAN5DPP0CG00 497 aa13.8□□□□□ -0.2
VMP1-217ENST00000593168 SLC6A4P31645 630 aa13.8□□□□□ -0.2
VMP1-217ENST00000593168 RPL22P35268 128 aaKnown RBP13.8□□□□□ -0.2
VMP1-217ENST00000593168 GARSP41250 739 aaKnown RBP13.8□□□□□ -0.2
VMP1-217ENST00000593168 MAPKAPK2P49137 400 aa13.8□□□□□ -0.2
VMP1-217ENST00000593168 NDST2P52849 883 aa13.8□□□□□ -0.2
VMP1-217ENST00000593168 PPIDQ08752 370 aaKnown RBP13.8□□□□□ -0.2
VMP1-217ENST00000593168 GPS1Q13098 491 aa13.8□□□□□ -0.2
VMP1-217ENST00000593168 TEAD2Q15562 447 aa13.8□□□□□ -0.2
VMP1-217ENST00000593168 KCTD19Q17RG1 926 aaPredicted RBP13.8□□□□□ -0.2
VMP1-217ENST00000593168 RABGAP1LQ5R372 815 aa13.8□□□□□ -0.2
VMP1-217ENST00000593168 HEATR6Q6AI08 1181 aaKnown RBP13.8□□□□□ -0.2
VMP1-217ENST00000593168 ZDHHC24Q6UX98 284 aa13.8□□□□□ -0.2
VMP1-217ENST00000593168 Q6ZNB5 142 aa13.8□□□□□ -0.2
VMP1-217ENST00000593168 HTR3DQ70Z44 454 aa13.8□□□□□ -0.2
VMP1-217ENST00000593168 GRASPQ7Z6J2 395 aaPredicted RBP13.8□□□□□ -0.2
VMP1-217ENST00000593168 PCGF5Q86SE9 256 aa13.8□□□□□ -0.2
VMP1-217ENST00000593168 PRUNE1Q86TP1 453 aa13.8□□□□□ -0.2
VMP1-217ENST00000593168 ARHGAP12Q8IWW6 846 aa13.8□□□□□ -0.2
VMP1-217ENST00000593168 LGI2Q8N0V4 545 aa13.8□□□□□ -0.2
VMP1-217ENST00000593168 SIX5Q8N196 739 aa13.8□□□□□ -0.2
VMP1-217ENST00000593168 DTWD2Q8NBA8 298 aa13.8□□□□□ -0.2
VMP1-217ENST00000593168 SMG7Q92540 1137 aaKnown RBP13.8□□□□□ -0.2
VMP1-217ENST00000593168 CAVIN3Q969G5 261 aa13.8□□□□□ -0.2
VMP1-217ENST00000593168 WBP2Q969T9 261 aa13.8□□□□□ -0.2
VMP1-217ENST00000593168 TCEAL4Q96EI5 215 aa13.8□□□□□ -0.2
VMP1-217ENST00000593168 TSGA13Q96PP4 275 aa13.8□□□□□ -0.2
VMP1-217ENST00000593168 LGMNQ99538 433 aa13.8□□□□□ -0.2
VMP1-217ENST00000593168 SLC39A8Q9C0K1 460 aa13.8□□□□□ -0.2
VMP1-217ENST00000593168 KCNK12Q9HB15 430 aa13.8□□□□□ -0.2
VMP1-217ENST00000593168 PIDD1Q9HB75 910 aa13.8□□□□□ -0.2
VMP1-217ENST00000593168 MPP6Q9NZW5 540 aa13.8□□□□□ -0.2
VMP1-217ENST00000593168 ZNF212Q9UDV6 495 aa13.8□□□□□ -0.2
VMP1-217ENST00000593168 LSM7Q9UK45 103 aaKnown RBP13.8□□□□□ -0.2
VMP1-217ENST00000593168 TPX2Q9ULW0 747 aaKnown RBP13.8□□□□□ -0.2
VMP1-217ENST00000593168 CACNA1AO00555 2505 aa13.8□□□□□ -0.2
VMP1-217ENST00000593168 NUP205Q92621 2012 aa13.8□□□□□ -0.2
VMP1-217ENST00000593168 NOTCH4Q99466 2003 aa13.8□□□□□ -0.2
VMP1-217ENST00000593168 NRG2O14511 850 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms