RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 E9PAM4 449 aa14.26□□□□□ -0.13
APOC1-208ENST00000592535 BCAT2O15382 392 aaPredicted RBP14.26□□□□□ -0.13
APOC1-208ENST00000592535 OPHN1O60890 802 aa14.26□□□□□ -0.13
APOC1-208ENST00000592535 ENDOD1O94919 500 aa14.26□□□□□ -0.13
APOC1-208ENST00000592535 RHOCP08134 193 aa14.26□□□□□ -0.13
APOC1-208ENST00000592535 SLC8A1P32418 973 aa14.26□□□□□ -0.13
APOC1-208ENST00000592535 NSFP46459 744 aaKnown RBP14.26□□□□□ -0.13
APOC1-208ENST00000592535 GRIK2Q13002 908 aa14.26□□□□□ -0.13
APOC1-208ENST00000592535 SEMA3BQ13214 749 aa14.26□□□□□ -0.13
APOC1-208ENST00000592535 CDO1Q16878 200 aa14.26□□□□□ -0.13
APOC1-208ENST00000592535 CLEC16AQ2KHT3 1053 aa14.26□□□□□ -0.13
APOC1-208ENST00000592535 C15orf59Q2T9L4 293 aaPredicted RBP14.26□□□□□ -0.13
APOC1-208ENST00000592535 CCDC14Q49A88 953 aa14.26□□□□□ -0.13
APOC1-208ENST00000592535 LRRC31Q6UY01 552 aa14.26□□□□□ -0.13
APOC1-208ENST00000592535 TFAP2DQ7Z6R9 452 aa14.26□□□□□ -0.13
APOC1-208ENST00000592535 HDDC3Q8N4P3 179 aa14.26□□□□□ -0.13
APOC1-208ENST00000592535 C1orf216Q8TAB5 229 aa14.26□□□□□ -0.13
APOC1-208ENST00000592535 FRS2Q8WU20 508 aa14.26□□□□□ -0.13
APOC1-208ENST00000592535 BIRC7Q96CA5 298 aa14.26□□□□□ -0.13
APOC1-208ENST00000592535 PPP1R9BQ96SB3 815 aa14.26□□□□□ -0.13
APOC1-208ENST00000592535 PSMB7Q99436 277 aa14.26□□□□□ -0.13
APOC1-208ENST00000592535 AGPAT1Q99943 283 aa14.26□□□□□ -0.13
APOC1-208ENST00000592535 MUC3BQ9H195 1237 aa14.26□□□□□ -0.13
APOC1-208ENST00000592535 RTN4Q9NQC3 1192 aaKnown RBP14.26□□□□□ -0.13
APOC1-208ENST00000592535 SEPT11Q9NVA2 429 aaKnown RBP14.26□□□□□ -0.13
APOC1-208ENST00000592535 TMEM51Q9NW97 253 aa14.26□□□□□ -0.13
APOC1-208ENST00000592535 ADAM22Q9P0K1 906 aa14.26□□□□□ -0.13
APOC1-208ENST00000592535 PCNX2A6NKB5 2137 aa14.26□□□□□ -0.13
APOC1-208ENST00000592535 IGLV3-10A0A075B6K4 115 aa14.25□□□□□ -0.13
APOC1-208ENST00000592535 C2CD4BA6NLJ0 364 aa14.25□□□□□ -0.13
APOC1-208ENST00000592535 SMTNL1A8MU46 457 aa14.25□□□□□ -0.13
APOC1-208ENST00000592535 ATP9BO43861 1147 aa14.25□□□□□ -0.13
APOC1-208ENST00000592535 SNAP91O60641 907 aa14.25□□□□□ -0.13
APOC1-208ENST00000592535 SRGAP2O75044 1071 aa14.25□□□□□ -0.13
APOC1-208ENST00000592535 RNASEH2AO75792 299 aaKnown RBP14.25□□□□□ -0.13
APOC1-208ENST00000592535 FSBPO95073 299 aa14.25□□□□□ -0.13
APOC1-208ENST00000592535 SDC4P31431 198 aa14.25□□□□□ -0.13
APOC1-208ENST00000592535 VASPP50552 380 aaPredicted RBP14.25□□□□□ -0.13
APOC1-208ENST00000592535 GSCP56915 257 aaPredicted RBP14.25□□□□□ -0.13
APOC1-208ENST00000592535 ZNF252P-AS1Q0IIN9 211 aa14.25□□□□□ -0.13
APOC1-208ENST00000592535 ELAVL3Q14576 367 aaKnown RBP14.25□□□□□ -0.13
APOC1-208ENST00000592535 PHF13Q86YI8 300 aaPredicted RBP14.25□□□□□ -0.13
APOC1-208ENST00000592535 AADATQ8N5Z0 425 aa14.25□□□□□ -0.13
APOC1-208ENST00000592535 HAPLN3Q96S86 360 aa14.25□□□□□ -0.13
APOC1-208ENST00000592535 OMDQ99983 421 aa14.25□□□□□ -0.13
APOC1-208ENST00000592535 FUCA2Q9BTY2 467 aa14.25□□□□□ -0.13
APOC1-208ENST00000592535 NEUROG2Q9H2A3 272 aa14.25□□□□□ -0.13
APOC1-208ENST00000592535 DNAAF2Q9NVR5 837 aaKnown RBP14.25□□□□□ -0.13
APOC1-208ENST00000592535 CHD5Q8TDI0 1954 aa14.24□□□□□ -0.13
APOC1-208ENST00000592535 A0A0D9SEW6 157 aa14.24□□□□□ -0.13
APOC1-208ENST00000592535 FAM47DPA6NHR8 397 aa14.24□□□□□ -0.13
APOC1-208ENST00000592535 GJB3O75712 270 aa14.24□□□□□ -0.13
APOC1-208ENST00000592535 ADH1BP00325 375 aa14.24□□□□□ -0.13
APOC1-208ENST00000592535 IL1BP01584 269 aa14.24□□□□□ -0.13
APOC1-208ENST00000592535 CALB1P05937 261 aa14.24□□□□□ -0.13
APOC1-208ENST00000592535 KRT3P12035 628 aa14.24□□□□□ -0.13
APOC1-208ENST00000592535 CEACAM1P13688 526 aa14.24□□□□□ -0.13
APOC1-208ENST00000592535 FERP16591 822 aa14.24□□□□□ -0.13
APOC1-208ENST00000592535 C5AR1P21730 350 aa14.24□□□□□ -0.13
APOC1-208ENST00000592535 PMLP29590 882 aa14.24□□□□□ -0.13
APOC1-208ENST00000592535 RFC1P35251 1148 aaPredicted RBP14.24□□□□□ -0.13
APOC1-208ENST00000592535 PTPN9P43378 593 aa14.24□□□□□ -0.13
APOC1-208ENST00000592535 ZNF165P49910 485 aa14.24□□□□□ -0.13
APOC1-208ENST00000592535 METAP1P53582 386 aa14.24□□□□□ -0.13
APOC1-208ENST00000592535 GALCP54803 685 aa14.24□□□□□ -0.13
APOC1-208ENST00000592535 BNC1Q01954 994 aa14.24□□□□□ -0.13
APOC1-208ENST00000592535 SFSWAPQ12872 951 aaKnown RBP14.24□□□□□ -0.13
APOC1-208ENST00000592535 DLG2Q15700 870 aa14.24□□□□□ -0.13
APOC1-208ENST00000592535 ACCSLQ4AC99 568 aa14.24□□□□□ -0.13
APOC1-208ENST00000592535 ACBD5Q5T8D3 534 aaPredicted RBP14.24□□□□□ -0.13
APOC1-208ENST00000592535 KIAA0895LQ68EN5 471 aa14.24□□□□□ -0.13
APOC1-208ENST00000592535 Q6ZVU0 165 aa14.24□□□□□ -0.13
APOC1-208ENST00000592535 MON1BQ7L1V2 547 aa14.24□□□□□ -0.13
APOC1-208ENST00000592535 PIP4P1Q86T03 277 aa14.24□□□□□ -0.13
APOC1-208ENST00000592535 SETD3Q86TU7 594 aaPredicted RBP14.24□□□□□ -0.13
APOC1-208ENST00000592535 SH2D3CQ8N5H7 860 aa14.24□□□□□ -0.13
APOC1-208ENST00000592535 OR8D1Q8WZ84 308 aa14.24□□□□□ -0.13
APOC1-208ENST00000592535 BAP1Q92560 729 aa14.24□□□□□ -0.13
APOC1-208ENST00000592535 SELENOOQ9BVL4 669 aa14.24□□□□□ -0.13
APOC1-208ENST00000592535 ZDHHC5Q9C0B5 715 aa14.24□□□□□ -0.13
APOC1-208ENST00000592535 ZNF212Q9UDV6 495 aa14.24□□□□□ -0.13
APOC1-208ENST00000592535 ADAMTS1Q9UHI8 967 aa14.24□□□□□ -0.13
APOC1-208ENST00000592535 VPS51Q9UID3 782 aa14.24□□□□□ -0.13
APOC1-208ENST00000592535 FZD4Q9ULV1 537 aa14.24□□□□□ -0.13
APOC1-208ENST00000592535 DOCK9Q9BZ29 2069 aa14.24□□□□□ -0.13
APOC1-208ENST00000592535 A0A1B0GVT2 93 aa14.23□□□□□ -0.13
APOC1-208ENST00000592535 UPK3BL1B0FP48 263 aa14.23□□□□□ -0.13
APOC1-208ENST00000592535 UPK3BL2E5RIL1 263 aa14.23□□□□□ -0.13
APOC1-208ENST00000592535 PLK4O00444 970 aa14.23□□□□□ -0.13
APOC1-208ENST00000592535 MT-CO1P00395 513 aa14.23□□□□□ -0.13
APOC1-208ENST00000592535 IGHV4-34P06331 123 aa14.23□□□□□ -0.13
APOC1-208ENST00000592535 SRCP12931 536 aa14.23□□□□□ -0.13
APOC1-208ENST00000592535 CD59P13987 128 aa14.23□□□□□ -0.13
APOC1-208ENST00000592535 GOT1P17174 413 aa14.23□□□□□ -0.13
APOC1-208ENST00000592535 GPD1P21695 349 aa14.23□□□□□ -0.13
APOC1-208ENST00000592535 CD27P26842 260 aa14.23□□□□□ -0.13
APOC1-208ENST00000592535 OR1E1P30953 314 aa14.23□□□□□ -0.13
APOC1-208ENST00000592535 ADRA1BP35368 520 aa14.23□□□□□ -0.13
APOC1-208ENST00000592535 CSNK1EP49674 416 aaKnown RBP14.23□□□□□ -0.13
APOC1-208ENST00000592535 KRT83P78385 493 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms