RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 OR2T34Q8NGX1 318 aa10.74□□□□□ -0.69
VPS4B-207ENST00000591519 SNX19Q92543 992 aa10.74□□□□□ -0.69
VPS4B-207ENST00000591519 PTPRN2Q92932 1015 aa10.74□□□□□ -0.69
VPS4B-207ENST00000591519 FAM131CQ96AQ9 280 aa10.74□□□□□ -0.69
VPS4B-207ENST00000591519 PPP1R9BQ96SB3 815 aa10.74□□□□□ -0.69
VPS4B-207ENST00000591519 ASNSD1Q9NWL6 643 aa10.74□□□□□ -0.69
VPS4B-207ENST00000591519 TJP2Q9UDY2 1190 aa10.74□□□□□ -0.69
VPS4B-207ENST00000591519 SLC12A6Q9UHW9 1150 aa10.74□□□□□ -0.69
VPS4B-207ENST00000591519 RWDD2AQ9UIY3 292 aa10.74□□□□□ -0.69
VPS4B-207ENST00000591519 RALYQ9UKM9 306 aaKnown RBP10.74□□□□□ -0.69
VPS4B-207ENST00000591519 PCDHGC3Q9UN70 934 aa10.74□□□□□ -0.69
VPS4B-207ENST00000591519 SPEGQ15772 3267 aa10.74□□□□□ -0.69
VPS4B-207ENST00000591519 PKD1L2Q7Z442 2459 aa10.74□□□□□ -0.69
VPS4B-207ENST00000591519 A0A1W2PP55 124 aa10.73□□□□□ -0.69
VPS4B-207ENST00000591519 LRRC72A6NJI9 287 aa10.73□□□□□ -0.69
VPS4B-207ENST00000591519 TTC34A8MYJ7 566 aa10.73□□□□□ -0.69
VPS4B-207ENST00000591519 H0Y8X5 98 aa10.73□□□□□ -0.69
VPS4B-207ENST00000591519 KCNK3O14649 394 aa10.73□□□□□ -0.69
VPS4B-207ENST00000591519 MID1O15344 667 aa10.73□□□□□ -0.69
VPS4B-207ENST00000591519 THAP12O43422 761 aa10.73□□□□□ -0.69
VPS4B-207ENST00000591519 MOCS2O96007 188 aaPredicted RBP10.73□□□□□ -0.69
VPS4B-207ENST00000591519 GOT1P17174 413 aa10.73□□□□□ -0.69
VPS4B-207ENST00000591519 SLC9A1P19634 815 aa10.73□□□□□ -0.69
VPS4B-207ENST00000591519 C5AR1P21730 350 aa10.73□□□□□ -0.69
VPS4B-207ENST00000591519 GNA15P30679 374 aa10.73□□□□□ -0.69
VPS4B-207ENST00000591519 CTSOP43234 321 aaPredicted RBP10.73□□□□□ -0.69
VPS4B-207ENST00000591519 GRK6P43250 576 aa10.73□□□□□ -0.69
VPS4B-207ENST00000591519 OXCT1P55809 520 aa10.73□□□□□ -0.69
VPS4B-207ENST00000591519 PITX1P78337 314 aaPredicted RBP10.73□□□□□ -0.69
VPS4B-207ENST00000591519 SULT2A1Q06520 285 aa10.73□□□□□ -0.69
VPS4B-207ENST00000591519 PDCLQ13371 301 aa10.73□□□□□ -0.69
VPS4B-207ENST00000591519 KCNJ12Q14500 433 aa10.73□□□□□ -0.69
VPS4B-207ENST00000591519 TAF5Q15542 800 aa10.73□□□□□ -0.69
VPS4B-207ENST00000591519 EFHC1Q5JVL4 640 aa10.73□□□□□ -0.69
VPS4B-207ENST00000591519 CCDC183Q5T5S1 534 aa10.73□□□□□ -0.69
VPS4B-207ENST00000591519 RAP1GAP2Q684P5 730 aa10.73□□□□□ -0.69
VPS4B-207ENST00000591519 CAVIN1Q6NZI2 390 aaKnown RBP10.73□□□□□ -0.69
VPS4B-207ENST00000591519 NCEH1Q6PIU2 408 aa10.73□□□□□ -0.69
VPS4B-207ENST00000591519 IRF2BP1Q8IU81 584 aa10.73□□□□□ -0.69
VPS4B-207ENST00000591519 MMAAQ8IVH4 418 aaKnown RBP10.73□□□□□ -0.69
VPS4B-207ENST00000591519 DHX40Q8IX18 779 aaKnown RBP10.73□□□□□ -0.69
VPS4B-207ENST00000591519 FRS2Q8WU20 508 aa10.73□□□□□ -0.69
VPS4B-207ENST00000591519 SHC3Q92529 594 aa10.73□□□□□ -0.69
VPS4B-207ENST00000591519 SKA1Q96BD8 255 aa10.73□□□□□ -0.69
VPS4B-207ENST00000591519 ALG14Q96F25 216 aa10.73□□□□□ -0.69
VPS4B-207ENST00000591519 SLC2A13Q96QE2 648 aa10.73□□□□□ -0.69
VPS4B-207ENST00000591519 ACE2Q9BYF1 805 aaPredicted RBP10.73□□□□□ -0.69
VPS4B-207ENST00000591519 EBF2Q9HAK2 575 aa10.73□□□□□ -0.69
VPS4B-207ENST00000591519 ACP6Q9NPH0 428 aa10.73□□□□□ -0.69
VPS4B-207ENST00000591519 DKK4Q9UBT3 224 aa10.73□□□□□ -0.69
VPS4B-207ENST00000591519 SERGEFQ9UGK8 458 aa10.73□□□□□ -0.69
VPS4B-207ENST00000591519 BTBD3Q9Y2F9 522 aa10.73□□□□□ -0.69
VPS4B-207ENST00000591519 TMEM131Q92545 1883 aa10.72□□□□□ -0.69
VPS4B-207ENST00000591519 KNTC1P50748 2209 aa10.72□□□□□ -0.69
VPS4B-207ENST00000591519 A0A1B0GTQ1 180 aa10.72□□□□□ -0.69
VPS4B-207ENST00000591519 A0A1W2PR77 199 aa10.72□□□□□ -0.69
VPS4B-207ENST00000591519 F5H5T6 163 aa10.72□□□□□ -0.69
VPS4B-207ENST00000591519 LATO43561 262 aa10.72□□□□□ -0.69
VPS4B-207ENST00000591519 ABCB4P21439 1286 aa10.72□□□□□ -0.69
VPS4B-207ENST00000591519 CCR1P32246 355 aa10.72□□□□□ -0.69
VPS4B-207ENST00000591519 NNMTP40261 264 aa10.72□□□□□ -0.69
VPS4B-207ENST00000591519 MTIF2P46199 727 aaKnown RBP10.72□□□□□ -0.69
VPS4B-207ENST00000591519 CCT8P50990 548 aa10.72□□□□□ -0.69
VPS4B-207ENST00000591519 CDK17Q00537 523 aa10.72□□□□□ -0.69
VPS4B-207ENST00000591519 ELAVL3Q14576 367 aaKnown RBP10.72□□□□□ -0.69
VPS4B-207ENST00000591519 SMAD1Q15797 465 aaKnown RBP10.72□□□□□ -0.69
VPS4B-207ENST00000591519 C5orf22Q49AR2 442 aa10.72□□□□□ -0.69
VPS4B-207ENST00000591519 TTC39BQ5VTQ0 682 aaPredicted RBP10.72□□□□□ -0.69
VPS4B-207ENST00000591519 FBXL22Q6P050 247 aa10.72□□□□□ -0.69
VPS4B-207ENST00000591519 SASS6Q6UVJ0 657 aa10.72□□□□□ -0.69
VPS4B-207ENST00000591519 GBP6Q6ZN66 633 aa10.72□□□□□ -0.69
VPS4B-207ENST00000591519 SND1Q7KZF4 910 aaKnown RBP eCLIP10.72□□□□□ -0.69
VPS4B-207ENST00000591519 CHSY1Q86X52 802 aa10.72□□□□□ -0.69
VPS4B-207ENST00000591519 DEFB106AQ8N104 65 aa10.72□□□□□ -0.69
VPS4B-207ENST00000591519 CCAR2Q8N163 923 aaKnown RBP10.72□□□□□ -0.69
VPS4B-207ENST00000591519 GALNT15Q8N3T1 639 aa10.72□□□□□ -0.69
VPS4B-207ENST00000591519 AADATQ8N5Z0 425 aa10.72□□□□□ -0.69
VPS4B-207ENST00000591519 GANCQ8TET4 914 aa10.72□□□□□ -0.69
VPS4B-207ENST00000591519 PPP1R13BQ96KQ4 1090 aa10.72□□□□□ -0.69
VPS4B-207ENST00000591519 RPL10LQ96L21 214 aaKnown RBP10.72□□□□□ -0.69
VPS4B-207ENST00000591519 CPXM1Q96SM3 734 aa10.72□□□□□ -0.69
VPS4B-207ENST00000591519 ELF4Q99607 663 aaPredicted RBP10.72□□□□□ -0.69
VPS4B-207ENST00000591519 OMDQ99983 421 aa10.72□□□□□ -0.69
VPS4B-207ENST00000591519 CRACR2AQ9BSW2 395 aa10.72□□□□□ -0.69
VPS4B-207ENST00000591519 KDM4CQ9H3R0 1056 aa10.72□□□□□ -0.69
VPS4B-207ENST00000591519 CCDC86Q9H6F5 360 aaKnown RBP10.72□□□□□ -0.69
VPS4B-207ENST00000591519 TMEM63CQ9P1W3 806 aa10.72□□□□□ -0.69
VPS4B-207ENST00000591519 APEX2Q9UBZ4 518 aa10.72□□□□□ -0.69
VPS4B-207ENST00000591519 OR51B4Q9Y5P0 310 aa10.72□□□□□ -0.69
VPS4B-207ENST00000591519 A0A1B0GVM2 712 aa10.71□□□□□ -0.69
VPS4B-207ENST00000591519 TCAF2A6NFQ2 919 aa10.71□□□□□ -0.69
VPS4B-207ENST00000591519 FAM47DPA6NHR8 397 aa10.71□□□□□ -0.69
VPS4B-207ENST00000591519 SLC7A4O43246 635 aa10.71□□□□□ -0.69
VPS4B-207ENST00000591519 ATP9BO43861 1147 aa10.71□□□□□ -0.69
VPS4B-207ENST00000591519 HSF2BPO75031 334 aa10.71□□□□□ -0.69
VPS4B-207ENST00000591519 RNASEH2AO75792 299 aaKnown RBP10.71□□□□□ -0.69
VPS4B-207ENST00000591519 WFS1O76024 890 aa10.71□□□□□ -0.69
VPS4B-207ENST00000591519 WNT1P04628 370 aa10.71□□□□□ -0.69
VPS4B-207ENST00000591519 PON1P27169 355 aa10.71□□□□□ -0.69
VPS4B-207ENST00000591519 MZF1P28698 734 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms