RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 CYP17A1P05093 508 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 FYNP06241 537 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 SRFP11831 508 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 PDGFRAP16234 1089 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 MX2P20592 715 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 ADH6P28332 368 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 GBP1P32455 592 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 RDXP35241 583 aaKnown RBP6.63□□□□□ -1.35
VPS4B-205ENST00000591383 SSR1P43307 286 aaKnown RBP6.63□□□□□ -1.35
VPS4B-205ENST00000591383 SLC11A2P49281 568 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 HARS2P49590 506 aaKnown RBP6.63□□□□□ -1.35
VPS4B-205ENST00000591383 KPNA1P52294 538 aaPredicted RBP6.63□□□□□ -1.35
VPS4B-205ENST00000591383 ATXN1P54253 815 aaKnown RBP6.63□□□□□ -1.35
VPS4B-205ENST00000591383 GALCP54803 685 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 GSCP56915 257 aaPredicted RBP6.63□□□□□ -1.35
VPS4B-205ENST00000591383 RPL7AP62424 266 aaKnown RBP6.63□□□□□ -1.35
VPS4B-205ENST00000591383 COG7P83436 770 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 ZXDBP98169 803 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 KDSRQ06136 332 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 TNK2Q07912 1038 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 PDGFRLQ15198 375 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 ARHGAP29Q52LW3 1261 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 ZC3H12AQ5D1E8 599 aaKnown RBP6.63□□□□□ -1.35
VPS4B-205ENST00000591383 WIPI1Q5MNZ9 446 aaPredicted RBP6.63□□□□□ -1.35
VPS4B-205ENST00000591383 NUGGCQ68CJ6 796 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 LRFN4Q6PJG9 635 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 RAD9BQ6WBX8 426 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 FAM131BQ86XD5 332 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 TMTC1Q8IUR5 882 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 TMEM139Q8IV31 216 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 MFSD6LQ8IWD5 586 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 CCDC170Q8IYT3 715 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 TAB3Q8N5C8 712 aaPredicted RBP6.63□□□□□ -1.35
VPS4B-205ENST00000591383 CCDC112Q8NEF3 446 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 FAM172AQ8WUF8 416 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 NANOS1Q8WY41 292 aaKnown RBP6.63□□□□□ -1.35
VPS4B-205ENST00000591383 PLPPR2Q96GM1 343 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 BTBD6Q96KE9 485 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 FCRL2Q96LA5 508 aaPredicted RBP6.63□□□□□ -1.35
VPS4B-205ENST00000591383 LRRC3BQ96PB8 259 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 CNPY3Q9BT09 278 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 DCLK3Q9C098 648 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 ISCUQ9H1K1 167 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 EBF3Q9H4W6 596 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 MRPL47Q9HD33 250 aaKnown RBP6.63□□□□□ -1.35
VPS4B-205ENST00000591383 ARHGEF3Q9NR81 526 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 PIGVQ9NUD9 493 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 OBP2AQ9NY56 170 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 RRN3Q9NYV6 651 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 NENFQ9UMX5 172 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 TFR2Q9UP52 801 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 PAXBP1Q9Y5B6 917 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 PIAS3Q9Y6X2 628 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 MUC3AQ02505 3323 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 ELOA3CA0A087WX78 387 aaPredicted RBP6.62□□□□□ -1.35
VPS4B-205ENST00000591383 TYW5A2RUC4 315 aaKnown RBP6.62□□□□□ -1.35
VPS4B-205ENST00000591383 ELOA3DA6NLF2 546 aaPredicted RBP6.62□□□□□ -1.35
VPS4B-205ENST00000591383 C2CD4BA6NLJ0 364 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 SIGLEC16A6NMB1 481 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 EIF3CLB5ME19 914 aaKnown RBP6.62□□□□□ -1.35
VPS4B-205ENST00000591383 NEDD8-MDP1E9PL57 170 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 SLC9A3R1O14745 358 aaPredicted RBP6.62□□□□□ -1.35
VPS4B-205ENST00000591383 CHADO15335 359 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 DCXO43602 365 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 TSPAN3O60637 253 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 RGS9O75916 674 aaPredicted RBP6.62□□□□□ -1.35
VPS4B-205ENST00000591383 IGLV3-25P01717 112 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 IGLV3-27P01718 113 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 CYP1A2P05177 515 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 TMEM253P0C7T8 217 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 ADH5P11766 374 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 CCR1P32246 355 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 RFC1P35251 1148 aaPredicted RBP6.62□□□□□ -1.35
VPS4B-205ENST00000591383 MAGEA1P43355 309 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 PTPN9P43378 593 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 GPC5P78333 572 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 PFKPQ01813 784 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 OGDHQ02218 1023 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 FCHO2Q0JRZ9 810 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 MAMLD1Q13495 774 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 POU4F3Q15319 338 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 ASTE1Q2TB18 679 aaPredicted RBP6.62□□□□□ -1.35
VPS4B-205ENST00000591383 ANO4Q32M45 955 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 ITPRIPL2Q3MIP1 535 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 SLC25A52Q3SY17 297 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 ELOA3BQ3SY89 546 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 RAB6CQ53S08 254 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 DAB2IPQ5VWQ8 1189 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 RAP1GAP2Q684P5 730 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 PLEKHA7Q6IQ23 1121 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 SCYL2Q6P3W7 929 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 TPGS1Q6ZTW0 290 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 TPRG1Q6ZUI0 275 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 BEND5Q7L4P6 421 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 CIR1Q86X95 450 aaPredicted RBP6.62□□□□□ -1.35
VPS4B-205ENST00000591383 SLC44A3Q8N4M1 653 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 IL22RA1Q8N6P7 574 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 ELOA3Q8NG57 546 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 OSCP1Q8WVF1 389 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 RFFLQ8WZ73 363 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms