RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 OLFML1Q6UWY5 402 aa22.4■■□□□ 1.18
DDX39A-215ENST00000590696 IRF2BP1Q8IU81 584 aa22.4■■□□□ 1.18
DDX39A-215ENST00000590696 OR52K2Q8NGK3 314 aa22.4■■□□□ 1.18
DDX39A-215ENST00000590696 ALG14Q96F25 216 aa22.4■■□□□ 1.18
DDX39A-215ENST00000590696 PPP1R9BQ96SB3 815 aa22.4■■□□□ 1.18
DDX39A-215ENST00000590696 SLC25A13Q9UJS0 675 aa22.4■■□□□ 1.18
DDX39A-215ENST00000590696 AJAP1Q9UKB5 411 aaPredicted RBP22.4■■□□□ 1.18
DDX39A-215ENST00000590696 TPX2Q9ULW0 747 aaKnown RBP22.4■■□□□ 1.18
DDX39A-215ENST00000590696 HS3ST4Q9Y661 456 aa22.4■■□□□ 1.18
DDX39A-215ENST00000590696 ERBB2P04626 1255 aa22.39■■□□□ 1.17
DDX39A-215ENST00000590696 ITGAVP06756 1048 aa22.39■■□□□ 1.17
DDX39A-215ENST00000590696 KRT9P35527 623 aa22.39■■□□□ 1.17
DDX39A-215ENST00000590696 GGCXP38435 758 aa22.39■■□□□ 1.17
DDX39A-215ENST00000590696 MTIF2P46199 727 aaKnown RBP22.39■■□□□ 1.17
DDX39A-215ENST00000590696 IRAK1P51617 712 aa22.39■■□□□ 1.17
DDX39A-215ENST00000590696 PPP2CBP62714 309 aa22.39■■□□□ 1.17
DDX39A-215ENST00000590696 PPP2CAP67775 309 aa22.39■■□□□ 1.17
DDX39A-215ENST00000590696 SHBQ15464 509 aa22.39■■□□□ 1.17
DDX39A-215ENST00000590696 OR8D1Q8WZ84 308 aa22.39■■□□□ 1.17
DDX39A-215ENST00000590696 FEM1AQ9BSK4 669 aa22.39■■□□□ 1.17
DDX39A-215ENST00000590696 SIX2Q9NPC8 291 aa22.39■■□□□ 1.17
DDX39A-215ENST00000590696 GDF3Q9NR23 364 aa22.39■■□□□ 1.17
DDX39A-215ENST00000590696 DNAJC12Q9UKB3 198 aa22.39■■□□□ 1.17
DDX39A-215ENST00000590696 SARDHQ9UL12 918 aa22.39■■□□□ 1.17
DDX39A-215ENST00000590696 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.38■■□□□ 1.17
DDX39A-215ENST00000590696 FAM149AA5PLN7 773 aa22.38■■□□□ 1.17
DDX39A-215ENST00000590696 M0QYT0 321 aa22.38■■□□□ 1.17
DDX39A-215ENST00000590696 ATP9BO43861 1147 aa22.38■■□□□ 1.17
DDX39A-215ENST00000590696 RTN2O75298 545 aa22.38■■□□□ 1.17
DDX39A-215ENST00000590696 DAB1O75553 588 aa22.38■■□□□ 1.17
DDX39A-215ENST00000590696 NOS2P35228 1153 aa22.38■■□□□ 1.17
DDX39A-215ENST00000590696 CLCN1P35523 988 aa22.38■■□□□ 1.17
DDX39A-215ENST00000590696 VASPP50552 380 aaPredicted RBP22.38■■□□□ 1.17
DDX39A-215ENST00000590696 SNX16P57768 344 aa22.38■■□□□ 1.17
DDX39A-215ENST00000590696 SLC6A3Q01959 620 aa22.38■■□□□ 1.17
DDX39A-215ENST00000590696 MTA1Q13330 715 aa22.38■■□□□ 1.17
DDX39A-215ENST00000590696 ZNF177Q13360 481 aaPredicted RBP22.38■■□□□ 1.17
DDX39A-215ENST00000590696 SMAD1Q15797 465 aaKnown RBP22.38■■□□□ 1.17
DDX39A-215ENST00000590696 SLC45A4Q5BKX6 768 aa22.38■■□□□ 1.17
DDX39A-215ENST00000590696 DHRS13Q6UX07 377 aa22.38■■□□□ 1.17
DDX39A-215ENST00000590696 DSG4Q86SJ6 1040 aa22.38■■□□□ 1.17
DDX39A-215ENST00000590696 C14orf80Q86SX3 495 aa22.38■■□□□ 1.17
DDX39A-215ENST00000590696 SAP25Q8TEE9 199 aa22.38■■□□□ 1.17
DDX39A-215ENST00000590696 FAM131CQ96AQ9 280 aa22.38■■□□□ 1.17
DDX39A-215ENST00000590696 SIK2Q9H0K1 926 aa22.38■■□□□ 1.17
DDX39A-215ENST00000590696 SYNCQ9H7C4 482 aa22.38■■□□□ 1.17
DDX39A-215ENST00000590696 LAMA5O15230 3695 aa22.37■■□□□ 1.17
DDX39A-215ENST00000590696 ADAMTS20P59510 1910 aa22.37■■□□□ 1.17
DDX39A-215ENST00000590696 TRABD2BA6NFA1 517 aa22.37■■□□□ 1.17
DDX39A-215ENST00000590696 TLR4O00206 839 aa22.37■■□□□ 1.17
DDX39A-215ENST00000590696 FOXN3O00409 490 aaPredicted RBP22.37■■□□□ 1.17
DDX39A-215ENST00000590696 LATO43561 262 aa22.37■■□□□ 1.17
DDX39A-215ENST00000590696 PAGE1O75459 146 aa22.37■■□□□ 1.17
DDX39A-215ENST00000590696 NXPH1P58417 271 aa22.37■■□□□ 1.17
DDX39A-215ENST00000590696 CAMK2BQ13554 666 aa22.37■■□□□ 1.17
DDX39A-215ENST00000590696 DLG2Q15700 870 aa22.37■■□□□ 1.17
DDX39A-215ENST00000590696 PTPN20Q4JDL3 420 aa22.37■■□□□ 1.17
DDX39A-215ENST00000590696 FAM46CQ5VWP2 391 aa22.37■■□□□ 1.17
DDX39A-215ENST00000590696 NAPEPLDQ6IQ20 393 aa22.37■■□□□ 1.17
DDX39A-215ENST00000590696 SLC26A9Q7LBE3 791 aa22.37■■□□□ 1.17
DDX39A-215ENST00000590696 PRPF39Q86UA1 669 aaKnown RBP22.37■■□□□ 1.17
DDX39A-215ENST00000590696 SLC47A2Q86VL8 602 aa22.37■■□□□ 1.17
DDX39A-215ENST00000590696 KDM4CQ9H3R0 1056 aa22.37■■□□□ 1.17
DDX39A-215ENST00000590696 PLCB1Q9NQ66 1216 aa22.37■■□□□ 1.17
DDX39A-215ENST00000590696 ARHGAP20Q9P2F6 1191 aa22.37■■□□□ 1.17
DDX39A-215ENST00000590696 VPS28Q9UK41 221 aa22.37■■□□□ 1.17
DDX39A-215ENST00000590696 RAXQ9Y2V3 346 aa22.37■■□□□ 1.17
DDX39A-215ENST00000590696 OR51B4Q9Y5P0 310 aa22.37■■□□□ 1.17
DDX39A-215ENST00000590696 ZFYVE26Q68DK2 2539 aa22.36■■□□□ 1.17
DDX39A-215ENST00000590696 CBX4O00257 560 aa22.36■■□□□ 1.17
DDX39A-215ENST00000590696 ENC1O14682 589 aa22.36■■□□□ 1.17
DDX39A-215ENST00000590696 YKT6O15498 198 aa22.36■■□□□ 1.17
DDX39A-215ENST00000590696 SLC7A4O43246 635 aa22.36■■□□□ 1.17
DDX39A-215ENST00000590696 PLRG1O43660 514 aaKnown RBP22.36■■□□□ 1.17
DDX39A-215ENST00000590696 CLDN11O75508 207 aa22.36■■□□□ 1.17
DDX39A-215ENST00000590696 LDOC1O95751 146 aaPredicted RBP22.36■■□□□ 1.17
DDX39A-215ENST00000590696 PNMA6AP0CW24 399 aaPredicted RBP22.36■■□□□ 1.17
DDX39A-215ENST00000590696 ZNF18P17022 549 aa22.36■■□□□ 1.17
DDX39A-215ENST00000590696 MAT2AP31153 395 aaKnown RBP22.36■■□□□ 1.17
DDX39A-215ENST00000590696 ARRB1P49407 418 aaPredicted RBP22.36■■□□□ 1.17
DDX39A-215ENST00000590696 CYP4F3Q08477 520 aa22.36■■□□□ 1.17
DDX39A-215ENST00000590696 TPD52L1Q16890 204 aaPredicted RBP22.36■■□□□ 1.17
DDX39A-215ENST00000590696 POM121L1PQ3SYA9 428 aa22.36■■□□□ 1.17
DDX39A-215ENST00000590696 C5orf22Q49AR2 442 aa22.36■■□□□ 1.17
DDX39A-215ENST00000590696 SMYD5Q6GMV2 418 aa22.36■■□□□ 1.17
DDX39A-215ENST00000590696 Q6ZVU0 165 aa22.36■■□□□ 1.17
DDX39A-215ENST00000590696 ZNF397Q8NF99 534 aaPredicted RBP22.36■■□□□ 1.17
DDX39A-215ENST00000590696 PIP4K2CQ8TBX8 421 aa22.36■■□□□ 1.17
DDX39A-215ENST00000590696 CNDP2Q96KP4 475 aaKnown RBP22.36■■□□□ 1.17
DDX39A-215ENST00000590696 DKK4Q9UBT3 224 aa22.36■■□□□ 1.17
DDX39A-215ENST00000590696 PPM1HQ9ULR3 514 aa22.36■■□□□ 1.17
DDX39A-215ENST00000590696 TBC1D30Q9Y2I9 924 aa22.36■■□□□ 1.17
DDX39A-215ENST00000590696 NBEAQ8NFP9 2946 aa22.36■■□□□ 1.17
DDX39A-215ENST00000590696 COL5A1P20908 1838 aaPredicted RBP22.36■■□□□ 1.17
DDX39A-215ENST00000590696 ANKRD11Q6UB99 2663 aaPredicted RBP22.35■■□□□ 1.17
DDX39A-215ENST00000590696 C1QTNF3-AMACRE9PGA6 284 aa22.35■■□□□ 1.17
DDX39A-215ENST00000590696 MCF2LO15068 1137 aa22.35■■□□□ 1.17
DDX39A-215ENST00000590696 BNIP3LO60238 219 aa22.35■■□□□ 1.17
DDX39A-215ENST00000590696 EPHA8P29322 1005 aaPredicted RBP22.35■■□□□ 1.17
DDX39A-215ENST00000590696 CDH4P55283 916 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms