RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 HASPINQ8TF76 798 aa19.56■□□□□ 0.72
PRKCSH-209ENST00000589838 NMRK2Q9NPI5 230 aa19.56■□□□□ 0.72
PRKCSH-209ENST00000589838 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.56■□□□□ 0.721e-6■□□□□ 10.8
PRKCSH-209ENST00000589838 NLRC5Q86WI3 1866 aa19.56■□□□□ 0.72
PRKCSH-209ENST00000589838 SRCAPQ6ZRS2 3230 aa19.56■□□□□ 0.72
PRKCSH-209ENST00000589838 ZCWPW2A0A1B0GU75 182 aa19.56■□□□□ 0.72
PRKCSH-209ENST00000589838 CACNG3O60359 315 aa19.56■□□□□ 0.72
PRKCSH-209ENST00000589838 CABYRO75952 493 aa19.56■□□□□ 0.72
PRKCSH-209ENST00000589838 ANXA9O76027 345 aa19.56■□□□□ 0.72
PRKCSH-209ENST00000589838 PROCP04070 461 aa19.56■□□□□ 0.72
PRKCSH-209ENST00000589838 MYCNP04198 464 aaPredicted RBP19.56■□□□□ 0.72
PRKCSH-209ENST00000589838 GRIK1P39086 918 aa19.56■□□□□ 0.72
PRKCSH-209ENST00000589838 MAGEA12P43365 314 aa19.56■□□□□ 0.72
PRKCSH-209ENST00000589838 AQP5P55064 265 aa19.56■□□□□ 0.72
PRKCSH-209ENST00000589838 IRX4P78413 519 aa19.56■□□□□ 0.72
PRKCSH-209ENST00000589838 YWHAHQ04917 246 aaPredicted RBP19.56■□□□□ 0.72
PRKCSH-209ENST00000589838 PPP2R5DQ14738 602 aa19.56■□□□□ 0.72
PRKCSH-209ENST00000589838 TEDDM1Q5T9Z0 273 aa19.56■□□□□ 0.72
PRKCSH-209ENST00000589838 ARHGAP24Q8N264 748 aa19.56■□□□□ 0.72
PRKCSH-209ENST00000589838 ATPAF2Q8N5M1 289 aa19.56■□□□□ 0.72
PRKCSH-209ENST00000589838 SREK1Q8WXA9 508 aaKnown RBP19.56■□□□□ 0.72
PRKCSH-209ENST00000589838 SIK2Q9H0K1 926 aa19.56■□□□□ 0.72
PRKCSH-209ENST00000589838 SMOC2Q9H3U7 446 aa19.56■□□□□ 0.72
PRKCSH-209ENST00000589838 SNX15Q9NRS6 342 aa19.56■□□□□ 0.72
PRKCSH-209ENST00000589838 PPARGC1AQ9UBK2 798 aaKnown RBP19.56■□□□□ 0.72
PRKCSH-209ENST00000589838 SORCS3Q9UPU3 1222 aa19.56■□□□□ 0.72
PRKCSH-209ENST00000589838 L3MBTL1Q9Y468 752 aa19.56■□□□□ 0.72
PRKCSH-209ENST00000589838 FAM155AB1AL88 458 aaPredicted RBP19.55■□□□□ 0.72
PRKCSH-209ENST00000589838 ATP9BO43861 1147 aa19.55■□□□□ 0.72
PRKCSH-209ENST00000589838 ANP32DO95626 131 aa19.55■□□□□ 0.72
PRKCSH-209ENST00000589838 GSRP00390 522 aa19.55■□□□□ 0.72
PRKCSH-209ENST00000589838 FGF3P11487 239 aaPredicted RBP19.55■□□□□ 0.72
PRKCSH-209ENST00000589838 HOXC13P31276 330 aa19.55■□□□□ 0.72
PRKCSH-209ENST00000589838 SLC1A6P48664 564 aa19.55■□□□□ 0.72
PRKCSH-209ENST00000589838 CERCAMQ5T4B2 595 aa19.55■□□□□ 0.72
PRKCSH-209ENST00000589838 CCSAPQ6IQ19 270 aaPredicted RBP19.55■□□□□ 0.72
PRKCSH-209ENST00000589838 ZNF598Q86UK7 904 aaKnown RBP19.55■□□□□ 0.72
PRKCSH-209ENST00000589838 LRRC49Q8IUZ0 686 aa19.55■□□□□ 0.72
PRKCSH-209ENST00000589838 DCLK2Q8N568 766 aa19.55■□□□□ 0.72
PRKCSH-209ENST00000589838 SCAMP5Q8TAC9 235 aa19.55■□□□□ 0.72
PRKCSH-209ENST00000589838 DPF3Q92784 378 aa19.55■□□□□ 0.72
PRKCSH-209ENST00000589838 CELF6Q96J87 481 aaKnown RBP19.55■□□□□ 0.72
PRKCSH-209ENST00000589838 TMEM209Q96SK2 561 aa19.55■□□□□ 0.72
PRKCSH-209ENST00000589838 DFFAO00273 331 aa19.54■□□□□ 0.72
PRKCSH-209ENST00000589838 EOMESO95936 686 aa19.54■□□□□ 0.72
PRKCSH-209ENST00000589838 KITP10721 976 aa19.54■□□□□ 0.72
PRKCSH-209ENST00000589838 YY1P25490 414 aa19.54■□□□□ 0.72
PRKCSH-209ENST00000589838 SLC5A3P53794 718 aa19.54■□□□□ 0.72
PRKCSH-209ENST00000589838 RPL10AP62906 217 aaKnown RBP19.54■□□□□ 0.72
PRKCSH-209ENST00000589838 OLIG2Q13516 323 aa19.54■□□□□ 0.72
PRKCSH-209ENST00000589838 CES4AQ5XG92 561 aa19.54■□□□□ 0.72
PRKCSH-209ENST00000589838 TIGD7Q6NT04 549 aaPredicted RBP19.54■□□□□ 0.72
PRKCSH-209ENST00000589838 KCNMB4Q86W47 210 aa19.54■□□□□ 0.72
PRKCSH-209ENST00000589838 DCP1BQ8IZD4 617 aaKnown RBP19.54■□□□□ 0.72
PRKCSH-209ENST00000589838 CFAP61Q8NHU2 1237 aa19.54■□□□□ 0.72
PRKCSH-209ENST00000589838 ZSCAN18Q8TBC5 510 aaPredicted RBP19.54■□□□□ 0.72
PRKCSH-209ENST00000589838 PIWIL2Q8TC59 973 aaKnown RBP19.54■□□□□ 0.72
PRKCSH-209ENST00000589838 RILPQ96NA2 401 aa19.54■□□□□ 0.72
PRKCSH-209ENST00000589838 ARHGAP39Q9C0H5 1083 aa19.54■□□□□ 0.72
PRKCSH-209ENST00000589838 NMUR2Q9GZQ4 415 aa19.54■□□□□ 0.72
PRKCSH-209ENST00000589838 MMADHCQ9H3L0 296 aaPredicted RBP19.54■□□□□ 0.72
PRKCSH-209ENST00000589838 C20orf96Q9NUD7 363 aaPredicted RBP19.54■□□□□ 0.72
PRKCSH-209ENST00000589838 GSC2O15499 205 aa19.54■□□□□ 0.72
PRKCSH-209ENST00000589838 PAGE1O75459 146 aa19.54■□□□□ 0.72
PRKCSH-209ENST00000589838 TOP3BO95985 862 aaKnown RBP19.54■□□□□ 0.72
PRKCSH-209ENST00000589838 MPP3Q13368 585 aa19.54■□□□□ 0.72
PRKCSH-209ENST00000589838 ITGA7Q13683 1181 aa19.54■□□□□ 0.72
PRKCSH-209ENST00000589838 PCLAFQ15004 111 aa19.54■□□□□ 0.72
PRKCSH-209ENST00000589838 PDPK2PQ6A1A2 396 aa19.54■□□□□ 0.72
PRKCSH-209ENST00000589838 GLB1LQ6UWU2 654 aa19.54■□□□□ 0.72
PRKCSH-209ENST00000589838 ALYREFQ86V81 257 aaKnown RBP19.54■□□□□ 0.72
PRKCSH-209ENST00000589838 MCUR1Q96AQ8 359 aa19.54■□□□□ 0.72
PRKCSH-209ENST00000589838 FCRL5Q96RD9 977 aa19.54■□□□□ 0.72
PRKCSH-209ENST00000589838 KIFC1Q9BW19 673 aa19.54■□□□□ 0.72
PRKCSH-209ENST00000589838 CADM1Q9BY67 442 aaKnown RBP19.54■□□□□ 0.72
PRKCSH-209ENST00000589838 RNPEPL1Q9HAU8 725 aa19.54■□□□□ 0.72
PRKCSH-209ENST00000589838 FNIP2Q9P278 1114 aa19.54■□□□□ 0.72
PRKCSH-209ENST00000589838 COPG2Q9UBF2 871 aa19.54■□□□□ 0.72
PRKCSH-209ENST00000589838 MID2Q9UJV3 735 aa19.54■□□□□ 0.72
PRKCSH-209ENST00000589838 CASP8AP2Q9UKL3 1982 aa19.53■□□□□ 0.72
PRKCSH-209ENST00000589838 C2orf71A6NGG8 1288 aa19.53■□□□□ 0.72
PRKCSH-209ENST00000589838 TNFRSF10BO14763 440 aa19.53■□□□□ 0.72
PRKCSH-209ENST00000589838 MATN3O15232 486 aa19.53■□□□□ 0.72
PRKCSH-209ENST00000589838 SERPINA6P08185 405 aa19.53■□□□□ 0.72
PRKCSH-209ENST00000589838 CPA3P15088 417 aa19.53■□□□□ 0.72
PRKCSH-209ENST00000589838 GEMP55040 296 aa19.53■□□□□ 0.72
PRKCSH-209ENST00000589838 NRG1Q02297 640 aaPredicted RBP19.53■□□□□ 0.72
PRKCSH-209ENST00000589838 TRIM32Q13049 653 aa19.53■□□□□ 0.72
PRKCSH-209ENST00000589838 TRIM71Q2Q1W2 868 aaKnown RBP19.53■□□□□ 0.72
PRKCSH-209ENST00000589838 HSP90AA5PQ58FG0 334 aa19.53■□□□□ 0.72
PRKCSH-209ENST00000589838 FSTL4Q6MZW2 842 aa19.53■□□□□ 0.72
PRKCSH-209ENST00000589838 ZCCHC23Q6ZST2 131 aa19.53■□□□□ 0.72
PRKCSH-209ENST00000589838 CCDC117Q8IWD4 279 aaPredicted RBP19.53■□□□□ 0.72
PRKCSH-209ENST00000589838 ANKRD27Q96NW4 1050 aa19.53■□□□□ 0.72
PRKCSH-209ENST00000589838 IL12RB2Q99665 862 aa19.53■□□□□ 0.72
PRKCSH-209ENST00000589838 TBL1YQ9BQ87 522 aa19.53■□□□□ 0.72
PRKCSH-209ENST00000589838 RGS18Q9NS28 235 aa19.53■□□□□ 0.72
PRKCSH-209ENST00000589838 TMEM216Q9P0N5 145 aa19.53■□□□□ 0.72
PRKCSH-209ENST00000589838 MCM8Q9UJA3 840 aa19.53■□□□□ 0.72
PRKCSH-209ENST00000589838 C15orf41Q9Y2V0 281 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms