RNA–Protein interactions for RNA: ENST00000589828.1

VAT1-207, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-207ENST00000589828 USP28Q96RU2 1077 aa8.22□□□□□ -1.09
VAT1-207ENST00000589828 C7orf25Q9BPX7 421 aa8.22□□□□□ -1.09
VAT1-207ENST00000589828 BACH2Q9BYV9 841 aa8.22□□□□□ -1.09
VAT1-207ENST00000589828 NIF3L1Q9GZT8 377 aa8.22□□□□□ -1.09
VAT1-207ENST00000589828 NUCKS1Q9H1E3 243 aaKnown RBP8.22□□□□□ -1.09
VAT1-207ENST00000589828 BLZF1Q9H2G9 400 aa8.22□□□□□ -1.09
VAT1-207ENST00000589828 KDM4CQ9H3R0 1056 aa8.22□□□□□ -1.09
VAT1-207ENST00000589828 CGNQ9P2M7 1197 aaKnown RBP8.22□□□□□ -1.09
VAT1-207ENST00000589828 SMC3Q9UQE7 1217 aa8.22□□□□□ -1.09
VAT1-207ENST00000589828 BSNQ9UPA5 3926 aa8.21□□□□□ -1.09
VAT1-207ENST00000589828 AHCTF1Q8WYP5 2266 aa8.21□□□□□ -1.1
VAT1-207ENST00000589828 CPED1A4D0V7 1026 aa8.21□□□□□ -1.1
VAT1-207ENST00000589828 RNF103O00237 685 aa8.21□□□□□ -1.1
VAT1-207ENST00000589828 TRIM49P0CI25 452 aa8.21□□□□□ -1.1
VAT1-207ENST00000589828 TRIM49CP0CI26 452 aa8.21□□□□□ -1.1
VAT1-207ENST00000589828 NUDT1P36639 197 aa8.21□□□□□ -1.1
VAT1-207ENST00000589828 GCLMP48507 274 aa8.21□□□□□ -1.1
VAT1-207ENST00000589828 PPP3CAQ08209 521 aa8.21□□□□□ -1.1
VAT1-207ENST00000589828 ADIGQ0VDE8 80 aa8.21□□□□□ -1.1
VAT1-207ENST00000589828 ELAVL3Q14576 367 aaKnown RBP8.21□□□□□ -1.1
VAT1-207ENST00000589828 CLCA4Q14CN2 919 aa8.21□□□□□ -1.1
VAT1-207ENST00000589828 SLC39A14Q15043 492 aa8.21□□□□□ -1.1
VAT1-207ENST00000589828 IGFBP7Q16270 282 aa8.21□□□□□ -1.1
VAT1-207ENST00000589828 TBR1Q16650 682 aa8.21□□□□□ -1.1
VAT1-207ENST00000589828 HS1BP3Q53T59 392 aa8.21□□□□□ -1.1
VAT1-207ENST00000589828 DCAF6Q58WW2 860 aa8.21□□□□□ -1.1
VAT1-207ENST00000589828 MSANTD2Q6P1R3 559 aa8.21□□□□□ -1.1
VAT1-207ENST00000589828 XKR5Q6UX68 686 aa8.21□□□□□ -1.1
VAT1-207ENST00000589828 GCNT7Q6ZNI0 430 aa8.21□□□□□ -1.1
VAT1-207ENST00000589828 USP53Q70EK8 1073 aa8.21□□□□□ -1.1
VAT1-207ENST00000589828 EFL1Q7Z2Z2 1120 aaKnown RBP8.21□□□□□ -1.1
VAT1-207ENST00000589828 SLC9A9Q8IVB4 645 aa8.21□□□□□ -1.1
VAT1-207ENST00000589828 ANKRD52Q8NB46 1076 aa8.21□□□□□ -1.1
VAT1-207ENST00000589828 HJURPQ8NCD3 748 aaPredicted RBP8.21□□□□□ -1.1
VAT1-207ENST00000589828 WDR36Q8NI36 951 aaKnown RBP8.21□□□□□ -1.1
VAT1-207ENST00000589828 RNF139Q8WU17 664 aa8.21□□□□□ -1.1
VAT1-207ENST00000589828 HTR3CQ8WXA8 447 aa8.21□□□□□ -1.1
VAT1-207ENST00000589828 DHX58Q96C10 678 aa8.21□□□□□ -1.1
VAT1-207ENST00000589828 SGF29Q96ES7 293 aa8.21□□□□□ -1.1
VAT1-207ENST00000589828 PSMG3-AS1Q96PY0 264 aa8.21□□□□□ -1.1
VAT1-207ENST00000589828 SEMA3CQ99985 751 aa8.21□□□□□ -1.1
VAT1-207ENST00000589828 CALN1Q9BXU9 219 aa8.21□□□□□ -1.1
VAT1-207ENST00000589828 USP29Q9HBJ7 922 aa8.21□□□□□ -1.1
VAT1-207ENST00000589828 XPO7Q9UIA9 1087 aaKnown RBP8.21□□□□□ -1.1
VAT1-207ENST00000589828 KLF15Q9UIH9 416 aa8.21□□□□□ -1.1
VAT1-207ENST00000589828 MAN2B2Q9Y2E5 1009 aa8.21□□□□□ -1.1
VAT1-207ENST00000589828 MORC2Q9Y6X9 1032 aaPredicted RBP8.21□□□□□ -1.1
VAT1-207ENST00000589828 UBR5O95071 2799 aaPredicted RBP8.21□□□□□ -1.1
VAT1-207ENST00000589828 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.2□□□□□ -1.1
VAT1-207ENST00000589828 A0A1W2PQU0 124 aa8.2□□□□□ -1.1
VAT1-207ENST00000589828 EME2A4GXA9 379 aaPredicted RBP8.2□□□□□ -1.1
VAT1-207ENST00000589828 VPS37CA5D8V6 355 aaPredicted RBP8.2□□□□□ -1.1
VAT1-207ENST00000589828 IKBKBO14920 756 aa8.2□□□□□ -1.1
VAT1-207ENST00000589828 XPO1O14980 1071 aaKnown RBP8.2□□□□□ -1.1
VAT1-207ENST00000589828 IRAK2O43187 625 aa8.2□□□□□ -1.1
VAT1-207ENST00000589828 SLC7A4O43246 635 aa8.2□□□□□ -1.1
VAT1-207ENST00000589828 RNGTTO60942 597 aaKnown RBP8.2□□□□□ -1.1
VAT1-207ENST00000589828 LUC7L3O95232 432 aaKnown RBP8.2□□□□□ -1.1
VAT1-207ENST00000589828 GJB6O95452 261 aa8.2□□□□□ -1.1
VAT1-207ENST00000589828 ITGB2P05107 769 aa8.2□□□□□ -1.1
VAT1-207ENST00000589828 ITGA2BP08514 1039 aa8.2□□□□□ -1.1
VAT1-207ENST00000589828 ALPPL2P10696 532 aa8.2□□□□□ -1.1
VAT1-207ENST00000589828 TRIM21P19474 475 aaKnown RBP8.2□□□□□ -1.1
VAT1-207ENST00000589828 SLC5A2P31639 672 aa8.2□□□□□ -1.1
VAT1-207ENST00000589828 SLC11A2P49281 568 aa8.2□□□□□ -1.1
VAT1-207ENST00000589828 TBX4P57082 545 aa8.2□□□□□ -1.1
VAT1-207ENST00000589828 DAOAP59103 153 aa8.2□□□□□ -1.1
VAT1-207ENST00000589828 CYP4F2P78329 520 aa8.2□□□□□ -1.1
VAT1-207ENST00000589828 ZNF177Q13360 481 aaPredicted RBP8.2□□□□□ -1.1
VAT1-207ENST00000589828 CDH18Q13634 790 aa8.2□□□□□ -1.1
VAT1-207ENST00000589828 SKIDA1Q1XH10 827 aa8.2□□□□□ -1.1
VAT1-207ENST00000589828 GOLGA7BQ2TAP0 167 aa8.2□□□□□ -1.1
VAT1-207ENST00000589828 ZNF284Q2VY69 593 aa8.2□□□□□ -1.1
VAT1-207ENST00000589828 SETMARQ53H47 684 aaPredicted RBP8.2□□□□□ -1.1
VAT1-207ENST00000589828 MS4A13Q5J8X5 152 aa8.2□□□□□ -1.1
VAT1-207ENST00000589828 TPRG1LQ5T0D9 272 aa8.2□□□□□ -1.1
VAT1-207ENST00000589828 PIP5KL1Q5T9C9 394 aa8.2□□□□□ -1.1
VAT1-207ENST00000589828 OR6B2Q6IFH4 312 aa8.2□□□□□ -1.1
VAT1-207ENST00000589828 RBM44Q6ZP01 1051 aaKnown RBP8.2□□□□□ -1.1
VAT1-207ENST00000589828 ARL14Q8N4G2 192 aa8.2□□□□□ -1.1
VAT1-207ENST00000589828 KIAA0895Q8NCT3 520 aa8.2□□□□□ -1.1
VAT1-207ENST00000589828 ZNF548Q8NEK5 533 aaPredicted RBP8.2□□□□□ -1.1
VAT1-207ENST00000589828 TMEM174Q8WUU8 243 aa8.2□□□□□ -1.1
VAT1-207ENST00000589828 SEMA4DQ92854 862 aa8.2□□□□□ -1.1
VAT1-207ENST00000589828 AZIN2Q96A70 460 aa8.2□□□□□ -1.1
VAT1-207ENST00000589828 GRAMD1AQ96CP6 724 aa8.2□□□□□ -1.1
VAT1-207ENST00000589828 FCRL2Q96LA5 508 aaPredicted RBP8.2□□□□□ -1.1
VAT1-207ENST00000589828 BMFQ96LC9 184 aa8.2□□□□□ -1.1
VAT1-207ENST00000589828 SPAG5Q96R06 1193 aa8.2□□□□□ -1.1
VAT1-207ENST00000589828 ARHGAP9Q9BRR9 750 aa8.2□□□□□ -1.1
VAT1-207ENST00000589828 IRX2Q9BZI1 471 aaPredicted RBP8.2□□□□□ -1.1
VAT1-207ENST00000589828 LRRC27Q9C0I9 530 aa8.2□□□□□ -1.1
VAT1-207ENST00000589828 KCTD10Q9H3F6 313 aa8.2□□□□□ -1.1
VAT1-207ENST00000589828 LRRC4Q9HBW1 653 aa8.2□□□□□ -1.1
VAT1-207ENST00000589828 GPR27Q9NS67 375 aa8.2□□□□□ -1.1
VAT1-207ENST00000589828 CISHQ9NSE2 258 aa8.2□□□□□ -1.1
VAT1-207ENST00000589828 ABCC13Q9NSE7 274 aa8.2□□□□□ -1.1
VAT1-207ENST00000589828 DNAJC28Q9NX36 388 aa8.2□□□□□ -1.1
VAT1-207ENST00000589828 PPM1HQ9ULR3 514 aa8.2□□□□□ -1.1
VAT1-207ENST00000589828 ZFR2Q9UPR6 939 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms