RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	P2RY11	Q96G91	374 aa		15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	C9orf72	Q96LT7	481 aa		15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	WDR83	Q9BRX9	315 aa	Known RBP	15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	PHACTR1	Q9C0D0	580 aa		15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	RNPEPL1	Q9HAU8	725 aa		15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	SAYSD1	Q9NPB0	183 aa		15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	RAB6B	Q9NRW1	208 aa		15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	YIPF1	Q9Y548	306 aa		15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318		E7ESA3	106 aa		15.77	■□□□□ 0.12
DDX39A-209	ENST00000589318	SMAP	O00193	183 aa		15.77	■□□□□ 0.12
DDX39A-209	ENST00000589318	TLR5	O60602	858 aa		15.77	■□□□□ 0.12
DDX39A-209	ENST00000589318	BANF1	O75531	89 aa		15.77	■□□□□ 0.12
DDX39A-209	ENST00000589318	FGF18	O76093	207 aa		15.77	■□□□□ 0.12
DDX39A-209	ENST00000589318	MOCS2	O96007	188 aa	Predicted RBP	15.77	■□□□□ 0.12
DDX39A-209	ENST00000589318	KRT16	P08779	473 aa		15.77	■□□□□ 0.12
DDX39A-209	ENST00000589318	SRGAP2B	P0DMP2	458 aa		15.77	■□□□□ 0.12
DDX39A-209	ENST00000589318	HTR7	P34969	479 aa		15.77	■□□□□ 0.12
DDX39A-209	ENST00000589318	MLLT6	P55198	1093 aa	Predicted RBP	15.77	■□□□□ 0.12
DDX39A-209	ENST00000589318	GALNT2	Q10471	571 aa		15.77	■□□□□ 0.12
DDX39A-209	ENST00000589318	WASHC5	Q12768	1159 aa		15.77	■□□□□ 0.12
DDX39A-209	ENST00000589318	HIF1A	Q16665	826 aa		15.77	■□□□□ 0.12
DDX39A-209	ENST00000589318	C10orf120	Q5SQS8	335 aa		15.77	■□□□□ 0.12
DDX39A-209	ENST00000589318	FAXC	Q5TGI0	409 aa		15.77	■□□□□ 0.12
DDX39A-209	ENST00000589318	SNX30	Q5VWJ9	437 aa		15.77	■□□□□ 0.12
DDX39A-209	ENST00000589318	ANO7	Q6IWH7	933 aa		15.77	■□□□□ 0.12
DDX39A-209	ENST00000589318	C14orf80	Q86SX3	495 aa		15.77	■□□□□ 0.12
DDX39A-209	ENST00000589318	GPR65	Q8IYL9	337 aa		15.77	■□□□□ 0.12
DDX39A-209	ENST00000589318	AGGF1	Q8N302	714 aa	eCLIP	15.77	■□□□□ 0.12
DDX39A-209	ENST00000589318	FIBCD1	Q8N539	461 aa		15.77	■□□□□ 0.12
DDX39A-209	ENST00000589318	FAM81A	Q8TBF8	368 aa		15.77	■□□□□ 0.12
DDX39A-209	ENST00000589318	DPF3	Q92784	378 aa		15.77	■□□□□ 0.12
DDX39A-209	ENST00000589318	TRIM4	Q9C037	500 aa		15.77	■□□□□ 0.12
DDX39A-209	ENST00000589318	ZBP1	Q9H171	429 aa		15.77	■□□□□ 0.12
DDX39A-209	ENST00000589318	CYP4F11	Q9HBI6	524 aa		15.77	■□□□□ 0.12
DDX39A-209	ENST00000589318	MARCH2	Q9P0N8	246 aa		15.77	■□□□□ 0.12
DDX39A-209	ENST00000589318		A0A0A0MRY4	1105 aa		15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	ALOX15B	O15296	676 aa		15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	OBSL1	O75147	1896 aa		15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	SLC2A3	P11169	496 aa		15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	ATP5D	P30049	168 aa		15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	PPID	Q08752	370 aa	Known RBP	15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	AP1B1	Q10567	949 aa		15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	CBLB	Q13191	982 aa		15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	TNFAIP8L3	Q5GJ75	292 aa		15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	SYCP2L	Q5T4T6	812 aa		15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	RNF43	Q68DV7	783 aa		15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	IRGC	Q6NXR0	463 aa		15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	C4orf22	Q6V702	233 aa		15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	CEP128	Q6ZU80	1094 aa		15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	SPATA21	Q7Z572	469 aa		15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	MIB1	Q86YT6	1006 aa		15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	ZNF276	Q8N554	614 aa		15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	ENDOV	Q8N8Q3	282 aa	Known RBP	15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	C1orf74	Q96LT6	269 aa		15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	MYRFL	Q96LU7	910 aa		15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	SPATA13	Q96N96	652 aa		15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	TMEM237	Q96Q45	408 aa		15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	PRMT1	Q99873	361 aa	Known RBP	15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	ROPN1B	Q9BZX4	212 aa	Predicted RBP	15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	ROPN1	Q9HAT0	212 aa	Predicted RBP	15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	ETNK1	Q9HBU6	452 aa		15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	MRPL17	Q9NRX2	175 aa	Known RBP	15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	FNIP2	Q9P278	1114 aa		15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	NYNRIN	Q9P2P1	1898 aa	Known RBP	15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	PRKAG2	Q9UGJ0	569 aa		15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	PCDHB12	Q9Y5F1	795 aa		15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318		E9PAM4	449 aa		15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	TEX28	O15482	410 aa		15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	ZRSR2	Q15696	482 aa	Known RBP	15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	LRRC23	Q53EV4	343 aa	Predicted RBP	15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	RWDD4	Q6NW29	188 aa	Known RBP	15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	CENPU	Q71F23	418 aa		15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	PDZD4	Q76G19	769 aa	Predicted RBP	15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	ARHGAP12	Q8IWW6	846 aa		15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	CCNY	Q8ND76	341 aa		15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	SP7	Q8TDD2	431 aa	Predicted RBP	15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	OVCA2	Q8WZ82	227 aa		15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	HDAC11	Q96DB2	347 aa		15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	FAM192A	Q9GZU8	254 aa		15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	INSL6	Q9Y581	213 aa		15.76	■□□□□ 0.11
DDX39A-209	ENST00000589318	ZNF840P	A6NDX5	716 aa		15.75	■□□□□ 0.11
DDX39A-209	ENST00000589318	RNF103	O00237	685 aa		15.75	■□□□□ 0.11
DDX39A-209	ENST00000589318	NCAM2	O15394	837 aa		15.75	■□□□□ 0.11
DDX39A-209	ENST00000589318	CSH1	P0DML2	217 aa		15.75	■□□□□ 0.11
DDX39A-209	ENST00000589318	CSH2	P0DML3	217 aa		15.75	■□□□□ 0.11
DDX39A-209	ENST00000589318	CTSA	P10619	480 aa		15.75	■□□□□ 0.11
DDX39A-209	ENST00000589318	SERPINB6	P35237	376 aa		15.75	■□□□□ 0.11
DDX39A-209	ENST00000589318	GARS	P41250	739 aa	Known RBP	15.75	■□□□□ 0.11
DDX39A-209	ENST00000589318	ARL4C	P56559	192 aa		15.75	■□□□□ 0.11
DDX39A-209	ENST00000589318	PDIA2	Q13087	525 aa	Known RBP	15.75	■□□□□ 0.11
DDX39A-209	ENST00000589318	MS4A13	Q5J8X5	152 aa		15.75	■□□□□ 0.11
DDX39A-209	ENST00000589318	WASHC2D	Q5SRD0	308 aa		15.75	■□□□□ 0.11
DDX39A-209	ENST00000589318	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	15.75	■□□□□ 0.11
DDX39A-209	ENST00000589318	TCEAL8	Q8IYN2	117 aa		15.75	■□□□□ 0.11
DDX39A-209	ENST00000589318	C7orf61	Q8IZ16	206 aa		15.75	■□□□□ 0.11
DDX39A-209	ENST00000589318	B4GALNT2	Q8NHY0	566 aa		15.75	■□□□□ 0.11
DDX39A-209	ENST00000589318	NDFIP2	Q9NV92	336 aa		15.75	■□□□□ 0.11
DDX39A-209	ENST00000589318	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	15.75	■□□□□ 0.11

Retrieved 100 of 20,778 RNA–protein pairs in 23 ms