RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 ZNF783Q6ZMS7 281 aa19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 NPWQ8N729 165 aa19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 ZNF513Q8N8E2 541 aaPredicted RBP19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 PCDH19Q8TAB3 1148 aa19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 CYB5D2Q8WUJ1 264 aa19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 TTC17Q96AE7 1141 aa19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 FAF2Q96CS3 445 aa19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 PSMB7Q99436 277 aa19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 KLC2Q9H0B6 622 aa19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 CHRDQ9H2X0 955 aa19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 PCDHA3Q9Y5H8 950 aa19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 CCDC66A2RUB6 948 aa19.45■□□□□ 0.7
CLPTM1-209ENST00000588855 ODF2Q5BJF6 829 aa19.45■□□□□ 0.7
CLPTM1-209ENST00000588855 MFSD7Q6UXD7 560 aa19.45■□□□□ 0.7
CLPTM1-209ENST00000588855 UMODL1-AS1Q8N2C9 162 aa19.45■□□□□ 0.7
CLPTM1-209ENST00000588855 NETO2Q8NC67 525 aa19.45■□□□□ 0.7
CLPTM1-209ENST00000588855 ARHGEF2Q92974 986 aaKnown RBP19.45■□□□□ 0.7
CLPTM1-209ENST00000588855 CELF6Q96J87 481 aaKnown RBP19.45■□□□□ 0.7
CLPTM1-209ENST00000588855 ALS2CR12Q96Q35 445 aa19.45■□□□□ 0.7
CLPTM1-209ENST00000588855 ACOX2Q99424 681 aa19.45■□□□□ 0.7
CLPTM1-209ENST00000588855 PRR33A8MZF0 331 aa19.44■□□□□ 0.7
CLPTM1-209ENST00000588855 GLDCP23378 1020 aa19.44■□□□□ 0.7
CLPTM1-209ENST00000588855 PEX5P50542 639 aa19.44■□□□□ 0.7
CLPTM1-209ENST00000588855 MRPS21P82921 87 aaKnown RBP19.44■□□□□ 0.7
CLPTM1-209ENST00000588855 PTPRNQ16849 979 aa19.44■□□□□ 0.7
CLPTM1-209ENST00000588855 TMEM31Q5JXX7 168 aa19.44■□□□□ 0.7
CLPTM1-209ENST00000588855 TMCO3Q6UWJ1 677 aa19.44■□□□□ 0.7
CLPTM1-209ENST00000588855 ALLCQ8N6M5 410 aa19.44■□□□□ 0.7
CLPTM1-209ENST00000588855 DCAF4L2Q8NA75 395 aa19.44■□□□□ 0.7
CLPTM1-209ENST00000588855 IL17RCQ8NAC3 791 aa19.44■□□□□ 0.7
CLPTM1-209ENST00000588855 UCMAQ8WVF2 138 aa19.44■□□□□ 0.7
CLPTM1-209ENST00000588855 ALG3Q92685 438 aa19.44■□□□□ 0.7
CLPTM1-209ENST00000588855 SPON2Q9BUD6 331 aa19.44■□□□□ 0.7
CLPTM1-209ENST00000588855 MAGEH1Q9H213 219 aa19.44■□□□□ 0.7
CLPTM1-209ENST00000588855 LRRC19Q9H756 370 aa19.44■□□□□ 0.7
CLPTM1-209ENST00000588855 ATP13A1Q9HD20 1204 aa19.44■□□□□ 0.7
CLPTM1-209ENST00000588855 THAP10Q9P2Z0 257 aaPredicted RBP19.44■□□□□ 0.7
CLPTM1-209ENST00000588855 DDX3YO15523 660 aaKnown RBP19.43■□□□□ 0.7
CLPTM1-209ENST00000588855 TIMM44O43615 452 aa19.43■□□□□ 0.7
CLPTM1-209ENST00000588855 SNAP91O60641 907 aa19.43■□□□□ 0.7
CLPTM1-209ENST00000588855 KLF8O95600 359 aaPredicted RBP19.43■□□□□ 0.7
CLPTM1-209ENST00000588855 ATP5BP06576 529 aaKnown RBP19.43■□□□□ 0.7
CLPTM1-209ENST00000588855 DLDP09622 509 aaKnown RBP19.43■□□□□ 0.7
CLPTM1-209ENST00000588855 HNRNPLP14866 589 aaKnown RBP eCLIP19.43■□□□□ 0.7
CLPTM1-209ENST00000588855 DNA2P51530 1060 aa19.43■□□□□ 0.7
CLPTM1-209ENST00000588855 ZNF234Q14588 700 aa19.43■□□□□ 0.7
CLPTM1-209ENST00000588855 POLD3Q15054 466 aaPredicted RBP19.43■□□□□ 0.7
CLPTM1-209ENST00000588855 NCBP2-AS2Q69YL0 99 aa19.43■□□□□ 0.7
CLPTM1-209ENST00000588855 SPOCD1Q6ZMY3 1216 aa19.43■□□□□ 0.7
CLPTM1-209ENST00000588855 VSIG1Q86XK7 387 aa19.43■□□□□ 0.7
CLPTM1-209ENST00000588855 ARHGAP12Q8IWW6 846 aa19.43■□□□□ 0.7
CLPTM1-209ENST00000588855 TP53INP2Q8IXH6 220 aa19.43■□□□□ 0.7
CLPTM1-209ENST00000588855 CCDC33Q8N5R6 958 aa19.43■□□□□ 0.7
CLPTM1-209ENST00000588855 PQLC3Q8N755 202 aa19.43■□□□□ 0.7
CLPTM1-209ENST00000588855 TRIM58Q8NG06 486 aa19.43■□□□□ 0.7
CLPTM1-209ENST00000588855 EXD1Q8NHP7 514 aa19.43■□□□□ 0.7
CLPTM1-209ENST00000588855 CCDC26Q8TAB7 109 aa19.43■□□□□ 0.7
CLPTM1-209ENST00000588855 HMCESQ96FZ2 354 aa19.43■□□□□ 0.7
CLPTM1-209ENST00000588855 HES6Q96HZ4 224 aa19.43■□□□□ 0.7
CLPTM1-209ENST00000588855 MRGPRX3Q96LB0 322 aa19.43■□□□□ 0.7
CLPTM1-209ENST00000588855 RNF157Q96PX1 679 aa19.43■□□□□ 0.7
CLPTM1-209ENST00000588855 C1QTNF1Q9BXJ1 281 aa19.43■□□□□ 0.7
CLPTM1-209ENST00000588855 POLR3BQ9NW08 1133 aaPredicted RBP19.43■□□□□ 0.7
CLPTM1-209ENST00000588855 CACNA2D2Q9NY47 1150 aa19.43■□□□□ 0.7
CLPTM1-209ENST00000588855 DONSONQ9NYP3 566 aa19.43■□□□□ 0.7
CLPTM1-209ENST00000588855 VPS51Q9UID3 782 aa19.43■□□□□ 0.7
CLPTM1-209ENST00000588855 MIF4GDA9UHW6 222 aaKnown RBP19.42■□□□□ 0.7
CLPTM1-209ENST00000588855 ZNF487B1APH4 448 aa19.42■□□□□ 0.7
CLPTM1-209ENST00000588855 RASA4BC9J798 803 aa19.42■□□□□ 0.7
CLPTM1-209ENST00000588855 RASA4O43374 803 aa19.42■□□□□ 0.7
CLPTM1-209ENST00000588855 ZRANB2O95218 330 aaKnown RBP eCLIP19.42■□□□□ 0.7
CLPTM1-209ENST00000588855 ASLP04424 464 aa19.42■□□□□ 0.7
CLPTM1-209ENST00000588855 ETFBP38117 255 aa19.42■□□□□ 0.7
CLPTM1-209ENST00000588855 WASP42768 502 aa19.42■□□□□ 0.7
CLPTM1-209ENST00000588855 CDKN2BP42772 138 aa19.42■□□□□ 0.7
CLPTM1-209ENST00000588855 MAGEA9P43362 315 aa19.42■□□□□ 0.7
CLPTM1-209ENST00000588855 STK19P49842 368 aaPredicted RBP19.42■□□□□ 0.7
CLPTM1-209ENST00000588855 NDST2P52849 883 aa19.42■□□□□ 0.7
CLPTM1-209ENST00000588855 RWDD2BP57060 319 aa19.42■□□□□ 0.7
CLPTM1-209ENST00000588855 YBEYP58557 167 aaPredicted RBP19.42■□□□□ 0.7
CLPTM1-209ENST00000588855 ECT2LQ008S8 904 aa19.42■□□□□ 0.7
CLPTM1-209ENST00000588855 MTAPQ13126 283 aa19.42■□□□□ 0.7
CLPTM1-209ENST00000588855 LLGL1Q15334 1064 aa19.42■□□□□ 0.7
CLPTM1-209ENST00000588855 AFMIDQ63HM1 303 aa19.42■□□□□ 0.7
CLPTM1-209ENST00000588855 IL31Q6EBC2 164 aa19.42■□□□□ 0.7
CLPTM1-209ENST00000588855 CCDC50Q8IVM0 306 aa19.42■□□□□ 0.7
CLPTM1-209ENST00000588855 CHPFQ8IZ52 775 aa19.42■□□□□ 0.7
CLPTM1-209ENST00000588855 TXNDC5Q8NBS9 432 aaKnown RBP19.42■□□□□ 0.7
CLPTM1-209ENST00000588855 KCNV2Q8TDN2 545 aa19.42■□□□□ 0.7
CLPTM1-209ENST00000588855 RBM41Q96IZ5 413 aaKnown RBP19.42■□□□□ 0.7
CLPTM1-209ENST00000588855 RPL10LQ96L21 214 aaKnown RBP19.42■□□□□ 0.7
CLPTM1-209ENST00000588855 C2orf49Q9BVC5 232 aaPredicted RBP19.42■□□□□ 0.7
CLPTM1-209ENST00000588855 ACE2Q9BYF1 805 aaPredicted RBP19.42■□□□□ 0.7
CLPTM1-209ENST00000588855 SLC39A8Q9C0K1 460 aa19.42■□□□□ 0.7
CLPTM1-209ENST00000588855 C2orf42Q9NWW7 574 aa19.42■□□□□ 0.7
CLPTM1-209ENST00000588855 ERVW-1Q9UQF0 538 aa19.42■□□□□ 0.7
CLPTM1-209ENST00000588855 CKAP5Q14008 2032 aa19.42■□□□□ 0.7
CLPTM1-209ENST00000588855 CHURC1-FNTBB4DL54 471 aa19.41■□□□□ 0.7
CLPTM1-209ENST00000588855 WASH3PC4AMC7 463 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms