RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 ZNF844Q08AG5 666 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 CBLBQ13191 982 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 SLC29A2Q14542 456 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 PARP15Q460N3 678 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 TEX44Q53QW1 395 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 CEP85LQ5SZL2 805 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 FNBP1LQ5T0N5 605 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 SYCP2LQ5T4T6 812 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 STXBP5Q5T5C0 1151 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 TTC39BQ5VTQ0 682 aaPredicted RBP11.67□□□□□ -0.54
SMAD4-205ENST00000588745 Q6ZNB5 142 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 CHST9Q7L1S5 443 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 PID1Q7Z2X4 250 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 ZBED8Q8IZ13 594 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 GOLGA6L1Q8N7Z2 621 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 OR2W6PQ8NHA6 318 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 ZSCAN18Q8TBC5 510 aaPredicted RBP11.67□□□□□ -0.54
SMAD4-205ENST00000588745 GDPD5Q8WTR4 605 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 ARNTL2Q8WYA1 636 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 FATE1Q969F0 183 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 ZBTB9Q96C00 473 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 HMCESQ96FZ2 354 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 C9orf72Q96LT7 481 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 TEKT5Q96M29 485 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 TTC25Q96NG3 672 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 SERPINB12Q96P63 405 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 IL12RB2Q99665 862 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 DNMT3BQ9UBC3 853 aaKnown RBP11.67□□□□□ -0.54
SMAD4-205ENST00000588745 RSPH14Q9UHP6 348 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 IPO11Q9UI26 975 aaKnown RBP11.67□□□□□ -0.54
SMAD4-205ENST00000588745 ZFP37Q9Y6Q3 630 aaPredicted RBP11.67□□□□□ -0.54
SMAD4-205ENST00000588745 A0A1B0GVM2 712 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 TCAF2A6NFQ2 919 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 F5H423 210 aaPredicted RBP11.67□□□□□ -0.54
SMAD4-205ENST00000588745 PER2O15055 1255 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 CEP290O15078 2479 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 MATN3O15232 486 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 ALOX15BO15296 676 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 ZBTB24O43167 697 aaPredicted RBP11.67□□□□□ -0.54
SMAD4-205ENST00000588745 MOSPD3O75425 235 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 CLDN11O75508 207 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 BANF1O75531 89 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 ACSL3O95573 720 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 RHOP08100 348 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 ABHD2P08910 425 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 CCNB1P14635 433 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 NFKB1P19838 968 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 OR1E1P30953 314 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 CD68P34810 354 aaPredicted RBP11.67□□□□□ -0.54
SMAD4-205ENST00000588745 LMAN1P49257 510 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 ZXDBP98169 803 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 CDK16Q00536 496 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 IFFO1Q0D2I5 559 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 FASTKD3Q14CZ7 662 aaKnown RBP11.67□□□□□ -0.54
SMAD4-205ENST00000588745 KYNUQ16719 465 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 DUSP6Q16828 381 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 ANO4Q32M45 955 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 BBS9Q3SYG4 887 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 MSS51Q4VC12 460 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 ARHGAP15Q53QZ3 475 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 GPR158Q5T848 1215 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 ZNF534Q76KX8 674 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 FAM217AQ8IXS0 508 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 CFAP52Q8N1V2 620 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 USP33Q8TEY7 942 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 MAML1Q92585 1016 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 TCEAL4Q96EI5 215 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 SLC46A2Q9BY10 475 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 PRKD2Q9BZL6 878 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 SP110Q9HB58 689 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 XAB2Q9HCS7 855 aaKnown RBP11.67□□□□□ -0.54
SMAD4-205ENST00000588745 ARHGAP26Q9UNA1 814 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 CHD5Q8TDI0 1954 aa11.66□□□□□ -0.54
SMAD4-205ENST00000588745 CHD9Q3L8U1 2897 aa11.66□□□□□ -0.54
SMAD4-205ENST00000588745 GOLGA6L10A6NI86 522 aa11.66□□□□□ -0.54
SMAD4-205ENST00000588745 SOBPA7XYQ1 873 aa11.66□□□□□ -0.54
SMAD4-205ENST00000588745 GOLGA8KD6RF30 607 aa11.66□□□□□ -0.54
SMAD4-205ENST00000588745 GFRA2O00451 464 aa11.66□□□□□ -0.54
SMAD4-205ENST00000588745 TRDMT1O14717 391 aaKnown RBP11.66□□□□□ -0.54
SMAD4-205ENST00000588745 TSPAN3O60637 253 aa11.66□□□□□ -0.54
SMAD4-205ENST00000588745 JCHAINP01591 159 aa11.66□□□□□ -0.54
SMAD4-205ENST00000588745 SHBGP04278 402 aa11.66□□□□□ -0.54
SMAD4-205ENST00000588745 MAGEA3P43357 314 aa11.66□□□□□ -0.54
SMAD4-205ENST00000588745 SGSHP51688 502 aa11.66□□□□□ -0.54
SMAD4-205ENST00000588745 RPS24P62847 133 aaKnown RBP11.66□□□□□ -0.54
SMAD4-205ENST00000588745 SARNPP82979 210 aaKnown RBP11.66□□□□□ -0.54
SMAD4-205ENST00000588745 POLD3Q15054 466 aaPredicted RBP11.66□□□□□ -0.54
SMAD4-205ENST00000588745 TEAD2Q15562 447 aa11.66□□□□□ -0.54
SMAD4-205ENST00000588745 SLC5A9Q2M3M2 681 aa11.66□□□□□ -0.54
SMAD4-205ENST00000588745 PRSS36Q5K4E3 855 aa11.66□□□□□ -0.54
SMAD4-205ENST00000588745 C6orf118Q5T5N4 469 aa11.66□□□□□ -0.54
SMAD4-205ENST00000588745 HTR3DQ70Z44 454 aa11.66□□□□□ -0.54
SMAD4-205ENST00000588745 RBM23Q86U06 439 aaKnown RBP11.66□□□□□ -0.54
SMAD4-205ENST00000588745 CAND1Q86VP6 1230 aaKnown RBP11.66□□□□□ -0.54
SMAD4-205ENST00000588745 ANKMY2Q8IV38 441 aa11.66□□□□□ -0.54
SMAD4-205ENST00000588745 CNTD1Q8N815 330 aa11.66□□□□□ -0.54
SMAD4-205ENST00000588745 PDCD7Q8N8D1 485 aaKnown RBP11.66□□□□□ -0.54
SMAD4-205ENST00000588745 HJURPQ8NCD3 748 aaPredicted RBP11.66□□□□□ -0.54
SMAD4-205ENST00000588745 FBXO36Q8NEA4 188 aa11.66□□□□□ -0.54
SMAD4-205ENST00000588745 ZNF707Q96C28 371 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms