RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 TARDBPQ13148 414 aaKnown RBP eCLIP18.98■□□□□ 0.631e-6■■■■□ 23.1
CCDC43-204ENST00000588687 PDCLQ13371 301 aa18.98■□□□□ 0.63
CCDC43-204ENST00000588687 RTP5Q14D33 572 aa18.98■□□□□ 0.63
CCDC43-204ENST00000588687 RNF219Q5W0B1 726 aaPredicted RBP18.98■□□□□ 0.63
CCDC43-204ENST00000588687 ISM2Q6H9L7 571 aa18.98■□□□□ 0.63
CCDC43-204ENST00000588687 IQCHQ86VS3 1027 aa18.98■□□□□ 0.63
CCDC43-204ENST00000588687 TRIM69Q86WT6 500 aa18.98■□□□□ 0.63
CCDC43-204ENST00000588687 CCDC117Q8IWD4 279 aaPredicted RBP18.98■□□□□ 0.63
CCDC43-204ENST00000588687 PIP4K2CQ8TBX8 421 aa18.98■□□□□ 0.63
CCDC43-204ENST00000588687 RFFLQ8WZ73 363 aa18.98■□□□□ 0.63
CCDC43-204ENST00000588687 DCBLD2Q96PD2 775 aa18.98■□□□□ 0.63
CCDC43-204ENST00000588687 SLC2A13Q96QE2 648 aa18.98■□□□□ 0.63
CCDC43-204ENST00000588687 INTS2Q9H0H0 1204 aaKnown RBP18.98■□□□□ 0.63
CCDC43-204ENST00000588687 KDM4CQ9H3R0 1056 aa18.98■□□□□ 0.63
CCDC43-204ENST00000588687 OR51B4Q9Y5P0 310 aa18.98■□□□□ 0.63
CCDC43-204ENST00000588687 FLNBO75369 2602 aaKnown RBP18.98■□□□□ 0.63
CCDC43-204ENST00000588687 TENM4Q6N022 2769 aa18.98■□□□□ 0.63
CCDC43-204ENST00000588687 CAPN9O14815 690 aa18.97■□□□□ 0.63
CCDC43-204ENST00000588687 ATP9BO43861 1147 aa18.97■□□□□ 0.63
CCDC43-204ENST00000588687 TAS2R38P59533 333 aa18.97■□□□□ 0.63
CCDC43-204ENST00000588687 SULT2A1Q06520 285 aa18.97■□□□□ 0.63
CCDC43-204ENST00000588687 KCNH2Q12809 1159 aa18.97■□□□□ 0.63
CCDC43-204ENST00000588687 PROX2Q3B8N5 592 aa18.97■□□□□ 0.63
CCDC43-204ENST00000588687 C6orf118Q5T5N4 469 aa18.97■□□□□ 0.63
CCDC43-204ENST00000588687 TTC39BQ5VTQ0 682 aaPredicted RBP18.97■□□□□ 0.63
CCDC43-204ENST00000588687 FBXL22Q6P050 247 aa18.97■□□□□ 0.63
CCDC43-204ENST00000588687 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.97■□□□□ 0.63
CCDC43-204ENST00000588687 OXR1Q8N573 874 aa18.97■□□□□ 0.63
CCDC43-204ENST00000588687 ZNF606Q8WXB4 792 aa18.97■□□□□ 0.63
CCDC43-204ENST00000588687 NRSN2Q9GZP1 204 aa18.97■□□□□ 0.63
CCDC43-204ENST00000588687 THAP9Q9H5L6 903 aa18.97■□□□□ 0.63
CCDC43-204ENST00000588687 PRORYQ9H606 182 aa18.97■□□□□ 0.63
CCDC43-204ENST00000588687 PPM1HQ9ULR3 514 aa18.97■□□□□ 0.63
CCDC43-204ENST00000588687 SHROOM3Q8TF72 1996 aa18.97■□□□□ 0.63
CCDC43-204ENST00000588687 TBC1D3DA0A087WVF3 549 aa18.96■□□□□ 0.63
CCDC43-204ENST00000588687 TBC1D3IA0A087WXS9 549 aa18.96■□□□□ 0.63
CCDC43-204ENST00000588687 TBC1D3EA0A087X179 549 aa18.96■□□□□ 0.63
CCDC43-204ENST00000588687 TBC1D3KA0A087X1G2 549 aa18.96■□□□□ 0.63
CCDC43-204ENST00000588687 TBC1D3FA6NER0 549 aaPredicted RBP18.96■□□□□ 0.63
CCDC43-204ENST00000588687 BECN2A8MW95 431 aa18.96■□□□□ 0.63
CCDC43-204ENST00000588687 TBC1D3LB9A6J9 549 aa18.96■□□□□ 0.63
CCDC43-204ENST00000588687 C1QL1O75973 258 aa18.96■□□□□ 0.63
CCDC43-204ENST00000588687 TBC1D3HP0C7X1 549 aa18.96■□□□□ 0.63
CCDC43-204ENST00000588687 JUPP14923 745 aa18.96■□□□□ 0.63
CCDC43-204ENST00000588687 CETN1Q12798 172 aa18.96■□□□□ 0.63
CCDC43-204ENST00000588687 CNTN1Q12860 1018 aa18.96■□□□□ 0.63
CCDC43-204ENST00000588687 ILKQ13418 452 aa18.96■□□□□ 0.63
CCDC43-204ENST00000588687 STIM1Q13586 685 aa18.96■□□□□ 0.63
CCDC43-204ENST00000588687 OTUD1Q5VV17 481 aaPredicted RBP18.96■□□□□ 0.63
CCDC43-204ENST00000588687 TBC1D3GQ6DHY5 549 aa18.96■□□□□ 0.63
CCDC43-204ENST00000588687 TBC1D3CQ6IPX1 549 aa18.96■□□□□ 0.63
CCDC43-204ENST00000588687 ELOA2Q8IYF1 753 aaPredicted RBP18.96■□□□□ 0.63
CCDC43-204ENST00000588687 TBC1D3Q8IZP1 549 aaPredicted RBP18.96■□□□□ 0.63
CCDC43-204ENST00000588687 WDTC1Q8N5D0 677 aa18.96■□□□□ 0.63
CCDC43-204ENST00000588687 TMEM145Q8NBT3 493 aa18.96■□□□□ 0.63
CCDC43-204ENST00000588687 SNIP1Q8TAD8 396 aaKnown RBP18.96■□□□□ 0.63
CCDC43-204ENST00000588687 NELFBQ8WX92 580 aa18.96■□□□□ 0.63
CCDC43-204ENST00000588687 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.96■□□□□ 0.63
CCDC43-204ENST00000588687 DMTF1Q9Y222 760 aa18.96■□□□□ 0.63
CCDC43-204ENST00000588687 COL27A1Q8IZC6 1860 aaPredicted RBP18.96■□□□□ 0.63
CCDC43-204ENST00000588687 ZNF462Q96JM2 2506 aa18.96■□□□□ 0.63
CCDC43-204ENST00000588687 ALOX15BO15296 676 aa18.95■□□□□ 0.62
CCDC43-204ENST00000588687 LETM1O95202 739 aaPredicted RBP18.95■□□□□ 0.62
CCDC43-204ENST00000588687 KRT5P13647 590 aa18.95■□□□□ 0.62
CCDC43-204ENST00000588687 CKMT2P17540 419 aa18.95■□□□□ 0.62
CCDC43-204ENST00000588687 ACP1P24666 158 aa18.95■□□□□ 0.62
CCDC43-204ENST00000588687 MAT2AP31153 395 aaKnown RBP18.95■□□□□ 0.62
CCDC43-204ENST00000588687 PPP1R2P41236 205 aa18.95■□□□□ 0.62
CCDC43-204ENST00000588687 OVGP1Q12889 678 aa18.95■□□□□ 0.62
CCDC43-204ENST00000588687 SLC45A4Q5BKX6 768 aa18.95■□□□□ 0.62
CCDC43-204ENST00000588687 KLHL10Q6JEL2 608 aa18.95■□□□□ 0.62
CCDC43-204ENST00000588687 Q6ZVU0 165 aa18.95■□□□□ 0.62
CCDC43-204ENST00000588687 CACTIN-AS1Q8N1I8 211 aa18.95■□□□□ 0.62
CCDC43-204ENST00000588687 ATP6V0D2Q8N8Y2 350 aa18.95■□□□□ 0.62
CCDC43-204ENST00000588687 OR8D1Q8WZ84 308 aa18.95■□□□□ 0.62
CCDC43-204ENST00000588687 MED15Q96RN5 788 aa18.95■□□□□ 0.62
CCDC43-204ENST00000588687 UBL7Q96S82 380 aaPredicted RBP18.95■□□□□ 0.62
CCDC43-204ENST00000588687 CPXM1Q96SM3 734 aa18.95■□□□□ 0.62
CCDC43-204ENST00000588687 FEM1AQ9BSK4 669 aa18.95■□□□□ 0.62
CCDC43-204ENST00000588687 CA5BQ9Y2D0 317 aa18.95■□□□□ 0.62
CCDC43-204ENST00000588687 TRIM38O00635 465 aa18.94■□□□□ 0.62
CCDC43-204ENST00000588687 AFPP02771 609 aaKnown RBP18.94■□□□□ 0.62
CCDC43-204ENST00000588687 CTSLP07711 333 aa18.94■□□□□ 0.62
CCDC43-204ENST00000588687 GNA15P30679 374 aa18.94■□□□□ 0.62
CCDC43-204ENST00000588687 NUDT1P36639 197 aa18.94■□□□□ 0.62
CCDC43-204ENST00000588687 GGCXP38435 758 aa18.94■□□□□ 0.62
CCDC43-204ENST00000588687 NNMTP40261 264 aa18.94■□□□□ 0.62
CCDC43-204ENST00000588687 INSM1Q01101 510 aaPredicted RBP18.94■□□□□ 0.62
CCDC43-204ENST00000588687 SEMG2Q02383 582 aa18.94■□□□□ 0.62
CCDC43-204ENST00000588687 MORC3Q14149 939 aa18.94■□□□□ 0.62
CCDC43-204ENST00000588687 POM121L1PQ3SYA9 428 aa18.94■□□□□ 0.62
CCDC43-204ENST00000588687 RABGAP1LQ5R372 815 aa18.94■□□□□ 0.62
CCDC43-204ENST00000588687 PIP5KL1Q5T9C9 394 aa18.94■□□□□ 0.62
CCDC43-204ENST00000588687 GJB7Q6PEY0 223 aa18.94■□□□□ 0.62
CCDC43-204ENST00000588687 DEFB106AQ8N104 65 aa18.94■□□□□ 0.62
CCDC43-204ENST00000588687 DCBLD1Q8N8Z6 715 aa18.94■□□□□ 0.62
CCDC43-204ENST00000588687 CAAP1Q9H8G2 361 aa18.94■□□□□ 0.62
CCDC43-204ENST00000588687 FAM204AQ9H8W3 233 aa18.94■□□□□ 0.62
CCDC43-204ENST00000588687 ASNSD1Q9NWL6 643 aa18.94■□□□□ 0.62
CCDC43-204ENST00000588687 DDIT4Q9NX09 232 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms