RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 EIF3CQ99613 913 aaKnown RBP16.48■□□□□ 0.23
RETREG3-206ENST00000588423 RSPH9Q9H1X1 276 aaPredicted RBP16.48■□□□□ 0.23
RETREG3-206ENST00000588423 ARRDC1-AS1Q9H2J1 176 aa16.48■□□□□ 0.23
RETREG3-206ENST00000588423 PARD6AQ9NPB6 346 aa16.48■□□□□ 0.23
RETREG3-206ENST00000588423 SEMA4GQ9NTN9 838 aa16.48■□□□□ 0.23
RETREG3-206ENST00000588423 TMEM248Q9NWD8 314 aa16.48■□□□□ 0.23
RETREG3-206ENST00000588423 SLCO3A1Q9UIG8 710 aa16.48■□□□□ 0.23
RETREG3-206ENST00000588423 SCML1Q9UN30 329 aa16.48■□□□□ 0.23
RETREG3-206ENST00000588423 CYP8B1Q9UNU6 501 aa16.48■□□□□ 0.23
RETREG3-206ENST00000588423 BCLAF3A2AJT9 711 aaKnown RBP16.47■□□□□ 0.23
RETREG3-206ENST00000588423 TTC34A8MYJ7 566 aa16.47■□□□□ 0.23
RETREG3-206ENST00000588423 ATP9BO43861 1147 aa16.47■□□□□ 0.23
RETREG3-206ENST00000588423 RNASEH1O60930 286 aaKnown RBP16.47■□□□□ 0.23
RETREG3-206ENST00000588423 SIN3BO75182 1162 aa16.47■□□□□ 0.23
RETREG3-206ENST00000588423 RNF8O76064 485 aa16.47■□□□□ 0.23
RETREG3-206ENST00000588423 CD6P30203 668 aa16.47■□□□□ 0.23
RETREG3-206ENST00000588423 ETFBP38117 255 aa16.47■□□□□ 0.23
RETREG3-206ENST00000588423 EIF4A3P38919 411 aaKnown RBP16.47■□□□□ 0.23
RETREG3-206ENST00000588423 DPP6P42658 865 aa16.47■□□□□ 0.23
RETREG3-206ENST00000588423 STK19P49842 368 aaPredicted RBP16.47■□□□□ 0.23
RETREG3-206ENST00000588423 TPMTP51580 245 aa16.47■□□□□ 0.23
RETREG3-206ENST00000588423 SPEM2Q0P670 501 aa16.47■□□□□ 0.23
RETREG3-206ENST00000588423 TBX2Q13207 712 aaPredicted RBP16.47■□□□□ 0.23
RETREG3-206ENST00000588423 SLC18A3Q16572 532 aa16.47■□□□□ 0.23
RETREG3-206ENST00000588423 ASTE1Q2TB18 679 aaPredicted RBP16.47■□□□□ 0.23
RETREG3-206ENST00000588423 CCDC122Q5T0U0 273 aa16.47■□□□□ 0.23
RETREG3-206ENST00000588423 ZNF776Q68DI1 518 aaPredicted RBP16.47■□□□□ 0.23
RETREG3-206ENST00000588423 PSTKQ8IV42 348 aaKnown RBP16.47■□□□□ 0.23
RETREG3-206ENST00000588423 CNGA4Q8IV77 575 aa16.47■□□□□ 0.23
RETREG3-206ENST00000588423 KIAA2013Q8IYS2 634 aa16.47■□□□□ 0.23
RETREG3-206ENST00000588423 FRS2Q8WU20 508 aa16.47■□□□□ 0.23
RETREG3-206ENST00000588423 PTPRN2Q92932 1015 aa16.47■□□□□ 0.23
RETREG3-206ENST00000588423 TRIM5Q9C035 493 aa16.47■□□□□ 0.23
RETREG3-206ENST00000588423 THAP2Q9H0W7 228 aa16.47■□□□□ 0.23
RETREG3-206ENST00000588423 WSB2Q9NYS7 404 aaPredicted RBP16.47■□□□□ 0.23
RETREG3-206ENST00000588423 MYO1AQ9UBC5 1043 aa16.47■□□□□ 0.23
RETREG3-206ENST00000588423 HS3ST2Q9Y278 367 aa16.47■□□□□ 0.23
RETREG3-206ENST00000588423 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.46■□□□□ 0.23
RETREG3-206ENST00000588423 A0A0D9SEW6 157 aa16.46■□□□□ 0.23
RETREG3-206ENST00000588423 DNTTP04053 509 aa16.46■□□□□ 0.23
RETREG3-206ENST00000588423 CYP1A2P05177 515 aa16.46■□□□□ 0.23
RETREG3-206ENST00000588423 ZNF806P0C7X5 589 aa16.46■□□□□ 0.23
RETREG3-206ENST00000588423 PCK1P35558 622 aa16.46■□□□□ 0.23
RETREG3-206ENST00000588423 MPLP40238 635 aa16.46■□□□□ 0.23
RETREG3-206ENST00000588423 CLCN6P51797 869 aa16.46■□□□□ 0.23
RETREG3-206ENST00000588423 RPS14P62263 151 aaKnown RBP16.46■□□□□ 0.23
RETREG3-206ENST00000588423 RPL6Q02878 288 aaKnown RBP16.46■□□□□ 0.23
RETREG3-206ENST00000588423 GNA12Q03113 381 aa16.46■□□□□ 0.23
RETREG3-206ENST00000588423 SEMA3BQ13214 749 aa16.46■□□□□ 0.23
RETREG3-206ENST00000588423 ELAVL3Q14576 367 aaKnown RBP16.46■□□□□ 0.23
RETREG3-206ENST00000588423 RWDD4Q6NW29 188 aaKnown RBP16.46■□□□□ 0.23
RETREG3-206ENST00000588423 TMEFF1Q8IYR6 380 aa16.46■□□□□ 0.23
RETREG3-206ENST00000588423 SH2D3CQ8N5H7 860 aa16.46■□□□□ 0.23
RETREG3-206ENST00000588423 ARFGAP1Q8N6T3 406 aa16.46■□□□□ 0.23
RETREG3-206ENST00000588423 EPAS1Q99814 870 aa16.46■□□□□ 0.23
RETREG3-206ENST00000588423 MAGEB5Q9BZ81 275 aa16.46■□□□□ 0.23
RETREG3-206ENST00000588423 TRIM7Q9C029 511 aa16.46■□□□□ 0.23
RETREG3-206ENST00000588423 RBSNQ9H1K0 784 aa16.46■□□□□ 0.23
RETREG3-206ENST00000588423 CD93Q9NPY3 652 aa16.46■□□□□ 0.23
RETREG3-206ENST00000588423 VPS45Q9NRW7 570 aa16.46■□□□□ 0.23
RETREG3-206ENST00000588423 VPS51Q9UID3 782 aa16.46■□□□□ 0.23
RETREG3-206ENST00000588423 USP18Q9UMW8 372 aa16.46■□□□□ 0.23
RETREG3-206ENST00000588423 WASH4PA8MWX3 477 aa16.45■□□□□ 0.22
RETREG3-206ENST00000588423 AKR1B15C9JRZ8 316 aaPredicted RBP16.45■□□□□ 0.22
RETREG3-206ENST00000588423 NDUFS2O75306 463 aa16.45■□□□□ 0.22
RETREG3-206ENST00000588423 LRCH4O75427 683 aa16.45■□□□□ 0.22
RETREG3-206ENST00000588423 HOXD12P35452 270 aa16.45■□□□□ 0.22
RETREG3-206ENST00000588423 DHPSP49366 369 aaPredicted RBP16.45■□□□□ 0.22
RETREG3-206ENST00000588423 ADKP55263 362 aaKnown RBP16.45■□□□□ 0.22
RETREG3-206ENST00000588423 CREB5Q02930 508 aa16.45■□□□□ 0.22
RETREG3-206ENST00000588423 LMNB2Q03252 620 aa16.45■□□□□ 0.22
RETREG3-206ENST00000588423 SFSWAPQ12872 951 aaKnown RBP16.45■□□□□ 0.22
RETREG3-206ENST00000588423 PIGHQ14442 188 aaPredicted RBP16.45■□□□□ 0.22
RETREG3-206ENST00000588423 TTC31Q49AM3 519 aaPredicted RBP16.45■□□□□ 0.22
RETREG3-206ENST00000588423 ERMARDQ5T6L9 678 aa16.45■□□□□ 0.22
RETREG3-206ENST00000588423 PEAR1Q5VY43 1037 aaPredicted RBP16.45■□□□□ 0.22
RETREG3-206ENST00000588423 PRR23CQ6ZRP0 262 aa16.45■□□□□ 0.22
RETREG3-206ENST00000588423 CYP2U1Q7Z449 544 aa16.45■□□□□ 0.22
RETREG3-206ENST00000588423 PYROXD2Q8N2H3 581 aa16.45■□□□□ 0.22
RETREG3-206ENST00000588423 NIPA2Q8N8Q9 360 aa16.45■□□□□ 0.22
RETREG3-206ENST00000588423 CADM4Q8NFZ8 388 aa16.45■□□□□ 0.22
RETREG3-206ENST00000588423 FOXJ1Q92949 421 aa16.45■□□□□ 0.22
RETREG3-206ENST00000588423 TOE1Q96GM8 510 aaKnown RBP16.45■□□□□ 0.22
RETREG3-206ENST00000588423 ZNF419Q96HQ0 510 aaPredicted RBP16.45■□□□□ 0.22
RETREG3-206ENST00000588423 MAGEH1Q9H213 219 aa16.45■□□□□ 0.22
RETREG3-206ENST00000588423 DEF6Q9H4E7 631 aa16.45■□□□□ 0.22
RETREG3-206ENST00000588423 MTG2Q9H4K7 406 aa16.45■□□□□ 0.22
RETREG3-206ENST00000588423 CATSPERBQ9H7T0 1116 aa16.45■□□□□ 0.22
RETREG3-206ENST00000588423 DONSONQ9NYP3 566 aa16.45■□□□□ 0.22
RETREG3-206ENST00000588423 AP4E1Q9UPM8 1137 aa16.45■□□□□ 0.22
RETREG3-206ENST00000588423 PRR5-ARHGAP8B1AHC4 643 aa16.44■□□□□ 0.22
RETREG3-206ENST00000588423 ALOX15BO15296 676 aa16.44■□□□□ 0.22
RETREG3-206ENST00000588423 FGF10O15520 208 aaPredicted RBP16.44■□□□□ 0.22
RETREG3-206ENST00000588423 PRPSAP2O60256 369 aa16.44■□□□□ 0.22
RETREG3-206ENST00000588423 SRCP12931 536 aa16.44■□□□□ 0.22
RETREG3-206ENST00000588423 EPHB2P29323 1055 aa16.44■□□□□ 0.22
RETREG3-206ENST00000588423 MIPP30301 263 aa16.44■□□□□ 0.22
RETREG3-206ENST00000588423 PTGER3P43115 390 aa16.44■□□□□ 0.22
RETREG3-206ENST00000588423 ZNF135P52742 658 aaPredicted RBP16.44■□□□□ 0.22
RETREG3-206ENST00000588423 GALCP54803 685 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms