RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 WDFY4Q6ZS81 3184 aa12.17□□□□□ -0.46
SDHDP1-201ENST00000588055 H0Y858 1186 aa12.17□□□□□ -0.46
SDHDP1-201ENST00000588055 CBX4O00257 560 aa12.17□□□□□ -0.46
SDHDP1-201ENST00000588055 KRT86O43790 486 aa12.17□□□□□ -0.46
SDHDP1-201ENST00000588055 ADAM23O75077 832 aa12.17□□□□□ -0.46
SDHDP1-201ENST00000588055 CCDC175P0C221 793 aa12.17□□□□□ -0.46
SDHDP1-201ENST00000588055 TCF4P15884 667 aa12.17□□□□□ -0.46
SDHDP1-201ENST00000588055 GOT1P17174 413 aa12.17□□□□□ -0.46
SDHDP1-201ENST00000588055 COL9A1P20849 921 aa12.17□□□□□ -0.46
SDHDP1-201ENST00000588055 IL1R2P27930 398 aa12.17□□□□□ -0.46
SDHDP1-201ENST00000588055 IL12RB1P42701 662 aa12.17□□□□□ -0.46
SDHDP1-201ENST00000588055 PLK1P53350 603 aa12.17□□□□□ -0.46
SDHDP1-201ENST00000588055 PDK2Q15119 407 aa12.17□□□□□ -0.46
SDHDP1-201ENST00000588055 CA9Q16790 459 aa12.17□□□□□ -0.46
SDHDP1-201ENST00000588055 HEATR6Q6AI08 1181 aaKnown RBP12.17□□□□□ -0.46
SDHDP1-201ENST00000588055 TSSK4Q6SA08 328 aa12.17□□□□□ -0.46
SDHDP1-201ENST00000588055 TMCO3Q6UWJ1 677 aa12.17□□□□□ -0.46
SDHDP1-201ENST00000588055 CYP4V2Q6ZWL3 525 aaPredicted RBP12.17□□□□□ -0.46
SDHDP1-201ENST00000588055 RHOT1Q8IXI2 618 aa12.17□□□□□ -0.46
SDHDP1-201ENST00000588055 APCDD1Q8J025 514 aa12.17□□□□□ -0.46
SDHDP1-201ENST00000588055 PRSS33Q8NF86 280 aa12.17□□□□□ -0.46
SDHDP1-201ENST00000588055 HMGB4Q8WW32 186 aa12.17□□□□□ -0.46
SDHDP1-201ENST00000588055 ATRIPQ8WXE1 791 aa12.17□□□□□ -0.46
SDHDP1-201ENST00000588055 ATOH1Q92858 354 aaPredicted RBP12.17□□□□□ -0.46
SDHDP1-201ENST00000588055 LMLNQ96KR4 655 aa12.17□□□□□ -0.46
SDHDP1-201ENST00000588055 SPACA7Q96KW9 195 aa12.17□□□□□ -0.46
SDHDP1-201ENST00000588055 ACOX2Q99424 681 aa12.17□□□□□ -0.46
SDHDP1-201ENST00000588055 ZNF670Q9BS34 389 aa12.17□□□□□ -0.46
SDHDP1-201ENST00000588055 ZSCAN32Q9NX65 697 aa12.17□□□□□ -0.46
SDHDP1-201ENST00000588055 DDX56Q9NY93 547 aaKnown RBP12.17□□□□□ -0.46
SDHDP1-201ENST00000588055 SUN2Q9UH99 717 aa12.17□□□□□ -0.46
SDHDP1-201ENST00000588055 INTS6Q9UL03 887 aaKnown RBP12.17□□□□□ -0.46
SDHDP1-201ENST00000588055 PCDHGA2Q9Y5H1 932 aa12.17□□□□□ -0.46
SDHDP1-201ENST00000588055 RAD54BQ9Y620 910 aa12.17□□□□□ -0.46
SDHDP1-201ENST00000588055 ATG2BQ96BY7 2078 aa12.17□□□□□ -0.46
SDHDP1-201ENST00000588055 EDDM13A0A1B0GTR0 161 aa12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 MACROD2A1Z1Q3 448 aa12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 LRRD1A4D1F6 860 aa12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 ZSCAN5CA6NGD5 496 aaPredicted RBP12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 ARHGAP42A6NI28 874 aa12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 WASH4PA8MWX3 477 aa12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 K7ESF4 209 aa12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 PSTPIP1O43586 416 aa12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 BUB1O43683 1085 aa12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 BUB1BO60566 1050 aaPredicted RBP12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 RNASEH1O60930 286 aaKnown RBP12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 KRT1P04264 644 aa12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 SP9P0CG40 484 aa12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 TNNT1P13805 278 aa12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 COMTP21964 271 aa12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 PRKCHP24723 683 aa12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 HOXA6P31267 233 aa12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 HCAR3P49019 387 aa12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 NUMBP49757 651 aa12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 CLCN6P51797 869 aa12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 NDST2P52849 883 aa12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 YBEYP58557 167 aaPredicted RBP12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 PTPRNQ16849 979 aa12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 ACCSLQ4AC99 568 aa12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 LRRC38Q5VT99 294 aa12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 METTL3Q86U44 580 aaKnown RBP12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 LONP2Q86WA8 852 aa12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 SYCE1Q8N0S2 351 aa12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 LZTR1Q8N653 840 aa12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 ATP11CQ8NB49 1132 aa12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 OR7D4Q8NG98 312 aa12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 RPL10LQ96L21 214 aaKnown RBP12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 CSPG4P5Q96PW8 444 aa12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 PCDH18Q9HCL0 1135 aa12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 KLHL11Q9NVR0 708 aa12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 ZNF212Q9UDV6 495 aa12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 VPS51Q9UID3 782 aa12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 TFR2Q9UP52 801 aa12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 REXO2Q9Y3B8 237 aaKnown RBP12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 FARP1Q9Y4F1 1045 aaPredicted RBP12.16□□□□□ -0.46
SDHDP1-201ENST00000588055 A0A0D9SEW6 157 aa12.15□□□□□ -0.46
SDHDP1-201ENST00000588055 CCDC163A0A0D9SF12 145 aa12.15□□□□□ -0.46
SDHDP1-201ENST00000588055 CXorf51AA0A1B0GTR3 108 aa12.15□□□□□ -0.46
SDHDP1-201ENST00000588055 AXIN1O15169 862 aa12.15□□□□□ -0.46
SDHDP1-201ENST00000588055 PJA2O43164 708 aa12.15□□□□□ -0.46
SDHDP1-201ENST00000588055 CHRM1P11229 460 aaPredicted RBP12.15□□□□□ -0.46
SDHDP1-201ENST00000588055 ACADMP11310 421 aa12.15□□□□□ -0.46
SDHDP1-201ENST00000588055 HLA-EP13747 358 aa12.15□□□□□ -0.46
SDHDP1-201ENST00000588055 ERCC2P18074 760 aa12.15□□□□□ -0.46
SDHDP1-201ENST00000588055 CTSOP43234 321 aaPredicted RBP12.15□□□□□ -0.46
SDHDP1-201ENST00000588055 RECQLP46063 649 aaPredicted RBP12.15□□□□□ -0.46
SDHDP1-201ENST00000588055 STK19P49842 368 aaPredicted RBP12.15□□□□□ -0.46
SDHDP1-201ENST00000588055 TAS2R40P59535 323 aa12.15□□□□□ -0.46
SDHDP1-201ENST00000588055 TCF15Q12870 199 aa12.15□□□□□ -0.46
SDHDP1-201ENST00000588055 ENPP2Q13822 863 aa12.15□□□□□ -0.46
SDHDP1-201ENST00000588055 BYSLQ13895 437 aaKnown RBP12.15□□□□□ -0.46
SDHDP1-201ENST00000588055 DPYSQ14117 519 aa12.15□□□□□ -0.46
SDHDP1-201ENST00000588055 HNRNPA1L2Q32P51 320 aaKnown RBP12.15□□□□□ -0.46
SDHDP1-201ENST00000588055 TXNRD3NBQ6F5E7 133 aa12.15□□□□□ -0.46
SDHDP1-201ENST00000588055 KIAA1324Q6UXG2 1013 aaKnown RBP12.15□□□□□ -0.46
SDHDP1-201ENST00000588055 TMEM92Q6UXU6 159 aa12.15□□□□□ -0.46
SDHDP1-201ENST00000588055 DSG4Q86SJ6 1040 aa12.15□□□□□ -0.46
SDHDP1-201ENST00000588055 WDR5BQ86VZ2 330 aa12.15□□□□□ -0.46
SDHDP1-201ENST00000588055 MAML2Q8IZL2 1156 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms