RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 TFAP2DQ7Z6R9 452 aa10.37□□□□□ -0.75
TPM4-207ENST00000588032 DCAF4L2Q8NA75 395 aa10.37□□□□□ -0.75
TPM4-207ENST00000588032 OR52K2Q8NGK3 314 aa10.37□□□□□ -0.75
TPM4-207ENST00000588032 RLN3Q8WXF3 142 aa10.37□□□□□ -0.75
TPM4-207ENST00000588032 MRFAP1L1Q96HT8 127 aa10.37□□□□□ -0.75
TPM4-207ENST00000588032 EPAS1Q99814 870 aa10.37□□□□□ -0.75
TPM4-207ENST00000588032 THAP2Q9H0W7 228 aa10.37□□□□□ -0.75
TPM4-207ENST00000588032 RSPH9Q9H1X1 276 aaPredicted RBP10.37□□□□□ -0.75
TPM4-207ENST00000588032 MAGEH1Q9H213 219 aa10.37□□□□□ -0.75
TPM4-207ENST00000588032 CATSPERBQ9H7T0 1116 aa10.37□□□□□ -0.75
TPM4-207ENST00000588032 TMEM248Q9NWD8 314 aa10.37□□□□□ -0.75
TPM4-207ENST00000588032 USP36Q9P275 1121 aaKnown RBP10.37□□□□□ -0.75
TPM4-207ENST00000588032 ZNF212Q9UDV6 495 aa10.37□□□□□ -0.75
TPM4-207ENST00000588032 IP6K2Q9UHH9 426 aa10.37□□□□□ -0.75
TPM4-207ENST00000588032 SLCO3A1Q9UIG8 710 aa10.37□□□□□ -0.75
TPM4-207ENST00000588032 HS3ST2Q9Y278 367 aa10.37□□□□□ -0.75
TPM4-207ENST00000588032 INVSQ9Y283 1065 aa10.37□□□□□ -0.75
TPM4-207ENST00000588032 IGHV1OR15-9A0A0B4J2B8 117 aa10.36□□□□□ -0.75
TPM4-207ENST00000588032 TTC34A8MYJ7 566 aa10.36□□□□□ -0.75
TPM4-207ENST00000588032 FAM72CH0Y354 149 aa10.36□□□□□ -0.75
TPM4-207ENST00000588032 MYO1FO00160 1098 aa10.36□□□□□ -0.75
TPM4-207ENST00000588032 FGF10O15520 208 aaPredicted RBP10.36□□□□□ -0.75
TPM4-207ENST00000588032 ATP9BO43861 1147 aa10.36□□□□□ -0.75
TPM4-207ENST00000588032 NDUFS2O75306 463 aa10.36□□□□□ -0.75
TPM4-207ENST00000588032 DNTTP04053 509 aa10.36□□□□□ -0.75
TPM4-207ENST00000588032 H2AFZP0C0S5 128 aa10.36□□□□□ -0.75
TPM4-207ENST00000588032 BCKDHBP21953 392 aa10.36□□□□□ -0.75
TPM4-207ENST00000588032 EPHB2P29323 1055 aa10.36□□□□□ -0.75
TPM4-207ENST00000588032 CD6P30203 668 aa10.36□□□□□ -0.75
TPM4-207ENST00000588032 CTSOP43234 321 aaPredicted RBP10.36□□□□□ -0.75
TPM4-207ENST00000588032 TPMTP51580 245 aa10.36□□□□□ -0.75
TPM4-207ENST00000588032 GALCP54803 685 aa10.36□□□□□ -0.75
TPM4-207ENST00000588032 ADKP55263 362 aaKnown RBP10.36□□□□□ -0.75
TPM4-207ENST00000588032 GEMIN4P57678 1058 aaKnown RBP10.36□□□□□ -0.75
TPM4-207ENST00000588032 GNA12Q03113 381 aa10.36□□□□□ -0.75
TPM4-207ENST00000588032 GFPT1Q06210 699 aaPredicted RBP10.36□□□□□ -0.75
TPM4-207ENST00000588032 SEMA3BQ13214 749 aa10.36□□□□□ -0.75
TPM4-207ENST00000588032 ELAVL3Q14576 367 aaKnown RBP10.36□□□□□ -0.75
TPM4-207ENST00000588032 CSRP2Q16527 193 aa10.36□□□□□ -0.75
TPM4-207ENST00000588032 ACCSLQ4AC99 568 aa10.36□□□□□ -0.75
TPM4-207ENST00000588032 BOLA3Q53S33 107 aa10.36□□□□□ -0.75
TPM4-207ENST00000588032 C9orf64Q5T6V5 341 aa10.36□□□□□ -0.75
TPM4-207ENST00000588032 FAM72AQ5TYM5 149 aa10.36□□□□□ -0.75
TPM4-207ENST00000588032 ZNF776Q68DI1 518 aaPredicted RBP10.36□□□□□ -0.75
TPM4-207ENST00000588032 FAM72DQ6L9T8 149 aa10.36□□□□□ -0.75
TPM4-207ENST00000588032 RETSATQ6NUM9 610 aa10.36□□□□□ -0.75
TPM4-207ENST00000588032 H2AFVQ71UI9 128 aa10.36□□□□□ -0.75
TPM4-207ENST00000588032 DSG4Q86SJ6 1040 aa10.36□□□□□ -0.75
TPM4-207ENST00000588032 NLRP14Q86W24 1093 aa10.36□□□□□ -0.75
TPM4-207ENST00000588032 FAM72BQ86X60 149 aa10.36□□□□□ -0.75
TPM4-207ENST00000588032 DNAAF5Q86Y56 855 aa10.36□□□□□ -0.75
TPM4-207ENST00000588032 ZNF366Q8N895 744 aa10.36□□□□□ -0.75
TPM4-207ENST00000588032 NIPA2Q8N8Q9 360 aa10.36□□□□□ -0.75
TPM4-207ENST00000588032 CADM4Q8NFZ8 388 aa10.36□□□□□ -0.75
TPM4-207ENST00000588032 CTNNBL1Q8WYA6 563 aaPredicted RBP10.36□□□□□ -0.75
TPM4-207ENST00000588032 PTPRN2Q92932 1015 aa10.36□□□□□ -0.75
TPM4-207ENST00000588032 FOXJ1Q92949 421 aa10.36□□□□□ -0.75
TPM4-207ENST00000588032 RPL10LQ96L21 214 aaKnown RBP10.36□□□□□ -0.75
TPM4-207ENST00000588032 PCED1AQ9H1Q7 454 aa10.36□□□□□ -0.75
TPM4-207ENST00000588032 NHEJ1Q9H9Q4 299 aaPredicted RBP10.36□□□□□ -0.75
TPM4-207ENST00000588032 UVRAGQ9P2Y5 699 aa10.36□□□□□ -0.75
TPM4-207ENST00000588032 MBD1Q9UIS9 605 aaPredicted RBP10.36□□□□□ -0.75
TPM4-207ENST00000588032 HPCAL4Q9UM19 191 aa10.36□□□□□ -0.75
TPM4-207ENST00000588032 USP18Q9UMW8 372 aa10.36□□□□□ -0.75
TPM4-207ENST00000588032 NENFQ9UMX5 172 aa10.36□□□□□ -0.75
TPM4-207ENST00000588032 CYP8B1Q9UNU6 501 aa10.36□□□□□ -0.75
TPM4-207ENST00000588032 FARP1Q9Y4F1 1045 aaPredicted RBP10.36□□□□□ -0.75
TPM4-207ENST00000588032 MYO18AQ92614 2054 aaKnown RBP10.36□□□□□ -0.75
TPM4-207ENST00000588032 A0A0D9SEW6 157 aa10.35□□□□□ -0.75
TPM4-207ENST00000588032 BCLAF3A2AJT9 711 aaKnown RBP10.35□□□□□ -0.75
TPM4-207ENST00000588032 WASH4PA8MWX3 477 aa10.35□□□□□ -0.75
TPM4-207ENST00000588032 CREB3O43889 395 aa10.35□□□□□ -0.75
TPM4-207ENST00000588032 RAMP2O60895 175 aa10.35□□□□□ -0.75
TPM4-207ENST00000588032 SIN3BO75182 1162 aa10.35□□□□□ -0.75
TPM4-207ENST00000588032 LRCH4O75427 683 aa10.35□□□□□ -0.75
TPM4-207ENST00000588032 TMEM253P0C7T8 217 aa10.35□□□□□ -0.75
TPM4-207ENST00000588032 ZNF806P0C7X5 589 aa10.35□□□□□ -0.75
TPM4-207ENST00000588032 MIPP30301 263 aa10.35□□□□□ -0.75
TPM4-207ENST00000588032 HOXD12P35452 270 aa10.35□□□□□ -0.75
TPM4-207ENST00000588032 HCAR3P49019 387 aa10.35□□□□□ -0.75
TPM4-207ENST00000588032 STK19P49842 368 aaPredicted RBP10.35□□□□□ -0.75
TPM4-207ENST00000588032 ZNF75DP51815 510 aa10.35□□□□□ -0.75
TPM4-207ENST00000588032 YBEYP58557 167 aaPredicted RBP10.35□□□□□ -0.75
TPM4-207ENST00000588032 RPS14P62263 151 aaKnown RBP10.35□□□□□ -0.75
TPM4-207ENST00000588032 RPL6Q02878 288 aaKnown RBP10.35□□□□□ -0.75
TPM4-207ENST00000588032 ZNF252P-AS1Q0IIN9 211 aa10.35□□□□□ -0.75
TPM4-207ENST00000588032 SPEM2Q0P670 501 aa10.35□□□□□ -0.75
TPM4-207ENST00000588032 TTC31Q49AM3 519 aaPredicted RBP10.35□□□□□ -0.75
TPM4-207ENST00000588032 IL31Q6EBC2 164 aa10.35□□□□□ -0.75
TPM4-207ENST00000588032 USP30Q70CQ3 517 aa10.35□□□□□ -0.75
TPM4-207ENST00000588032 GAS2L3Q86XJ1 694 aa10.35□□□□□ -0.75
TPM4-207ENST00000588032 PYROXD2Q8N2H3 581 aa10.35□□□□□ -0.75
TPM4-207ENST00000588032 DCLK2Q8N568 766 aa10.35□□□□□ -0.75
TPM4-207ENST00000588032 SH2D3CQ8N5H7 860 aa10.35□□□□□ -0.75
TPM4-207ENST00000588032 ARFGAP1Q8N6T3 406 aa10.35□□□□□ -0.75
TPM4-207ENST00000588032 FRMD1Q8N878 549 aa10.35□□□□□ -0.75
TPM4-207ENST00000588032 RTL3Q8N8U3 475 aaKnown RBP10.35□□□□□ -0.75
TPM4-207ENST00000588032 FRS2Q8WU20 508 aa10.35□□□□□ -0.75
TPM4-207ENST00000588032 ZNF419Q96HQ0 510 aaPredicted RBP10.35□□□□□ -0.75
TPM4-207ENST00000588032 CCDC114Q96M63 670 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms