RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 CIR1Q86X95 450 aaPredicted RBP20.29■□□□□ 0.84
TRIM47-204ENST00000587339 RIBC1Q8N443 379 aaPredicted RBP20.29■□□□□ 0.84
TRIM47-204ENST00000587339 CNTD1Q8N815 330 aa20.29■□□□□ 0.84
TRIM47-204ENST00000587339 FBF1Q8TES7 1133 aa20.29■□□□□ 0.84
TRIM47-204ENST00000587339 USP33Q8TEY7 942 aa20.29■□□□□ 0.84
TRIM47-204ENST00000587339 AZIN2Q96A70 460 aa20.29■□□□□ 0.84
TRIM47-204ENST00000587339 MYEOVQ96EZ4 313 aa20.29■□□□□ 0.84
TRIM47-204ENST00000587339 C17orf80Q9BSJ5 609 aa20.29■□□□□ 0.84
TRIM47-204ENST00000587339 KLF16Q9BXK1 252 aaPredicted RBP20.29■□□□□ 0.84
TRIM47-204ENST00000587339 PPCSQ9HAB8 311 aa20.29■□□□□ 0.84
TRIM47-204ENST00000587339 TRPC7Q9HCX4 862 aa20.29■□□□□ 0.84
TRIM47-204ENST00000587339 TLR9Q9NR96 1032 aa20.29■□□□□ 0.84
TRIM47-204ENST00000587339 ZC3H7BQ9UGR2 993 aaKnown RBP20.29■□□□□ 0.84
TRIM47-204ENST00000587339 TBK1Q9UHD2 729 aa20.29■□□□□ 0.84
TRIM47-204ENST00000587339 RABGEF1Q9UJ41 708 aa20.29■□□□□ 0.84
TRIM47-204ENST00000587339 C2orf71A6NGG8 1288 aa20.29■□□□□ 0.84
TRIM47-204ENST00000587339 ERI2A8K979 691 aaKnown RBP20.29■□□□□ 0.84
TRIM47-204ENST00000587339 GLUD1P00367 558 aa20.29■□□□□ 0.84
TRIM47-204ENST00000587339 KLKB1P03952 638 aa20.29■□□□□ 0.84
TRIM47-204ENST00000587339 IRF1P10914 325 aa20.29■□□□□ 0.84
TRIM47-204ENST00000587339 SLC6A4P31645 630 aa20.29■□□□□ 0.84
TRIM47-204ENST00000587339 PPP2R2AP63151 447 aa20.29■□□□□ 0.84
TRIM47-204ENST00000587339 SKOR1P84550 965 aa20.29■□□□□ 0.84
TRIM47-204ENST00000587339 ANO4Q32M45 955 aa20.29■□□□□ 0.84
TRIM47-204ENST00000587339 SPPL3Q8TCT6 385 aa20.29■□□□□ 0.84
TRIM47-204ENST00000587339 HMCESQ96FZ2 354 aa20.29■□□□□ 0.84
TRIM47-204ENST00000587339 SIGLEC10Q96LC7 697 aa20.29■□□□□ 0.84
TRIM47-204ENST00000587339 IL12RB2Q99665 862 aa20.29■□□□□ 0.84
TRIM47-204ENST00000587339 GORASP1Q9BQQ3 440 aa20.29■□□□□ 0.84
TRIM47-204ENST00000587339 ACSS3Q9H6R3 686 aa20.29■□□□□ 0.84
TRIM47-204ENST00000587339 ZNF212Q9UDV6 495 aa20.29■□□□□ 0.84
TRIM47-204ENST00000587339 MAD1L1Q9Y6D9 718 aa20.29■□□□□ 0.84
TRIM47-204ENST00000587339 MYO18AQ92614 2054 aaKnown RBP20.28■□□□□ 0.84
TRIM47-204ENST00000587339 RASA4BC9J798 803 aa20.28■□□□□ 0.84
TRIM47-204ENST00000587339 RASA4O43374 803 aa20.28■□□□□ 0.84
TRIM47-204ENST00000587339 RAMP2O60895 175 aa20.28■□□□□ 0.84
TRIM47-204ENST00000587339 AP2A1O95782 977 aa20.28■□□□□ 0.84
TRIM47-204ENST00000587339 MBL2P11226 248 aaPredicted RBP20.28■□□□□ 0.84
TRIM47-204ENST00000587339 DNAJB1P25685 340 aa20.28■□□□□ 0.84
TRIM47-204ENST00000587339 GABRR2P28476 465 aa20.28■□□□□ 0.84
TRIM47-204ENST00000587339 MAPKAPK2P49137 400 aa20.28■□□□□ 0.84
TRIM47-204ENST00000587339 PRPSAP1Q14558 356 aa20.28■□□□□ 0.84
TRIM47-204ENST00000587339 KLHL38Q2WGJ6 581 aa20.28■□□□□ 0.84
TRIM47-204ENST00000587339 C5orf22Q49AR2 442 aa20.28■□□□□ 0.84
TRIM47-204ENST00000587339 CFAP52Q8N1V2 620 aa20.28■□□□□ 0.84
TRIM47-204ENST00000587339 ELMOD1Q8N336 334 aa20.28■□□□□ 0.84
TRIM47-204ENST00000587339 MICAL1Q8TDZ2 1067 aa20.28■□□□□ 0.84
TRIM47-204ENST00000587339 CFAP36Q96G28 342 aa20.28■□□□□ 0.84
TRIM47-204ENST00000587339 CYP2S1Q96SQ9 504 aa20.28■□□□□ 0.84
TRIM47-204ENST00000587339 SMPD4Q9NXE4 827 aa20.28■□□□□ 0.84
TRIM47-204ENST00000587339 PSD3Q9NYI0 1048 aa20.28■□□□□ 0.84
TRIM47-204ENST00000587339 LGALS13Q9UHV8 139 aa20.28■□□□□ 0.84
TRIM47-204ENST00000587339 TTLL3Q9Y4R7 772 aa20.28■□□□□ 0.84
TRIM47-204ENST00000587339 SHROOM3Q8TF72 1996 aa20.28■□□□□ 0.84
TRIM47-204ENST00000587339 NEBLO76041 1014 aa20.27■□□□□ 0.84
TRIM47-204ENST00000587339 GCAP28676 217 aa20.27■□□□□ 0.84
TRIM47-204ENST00000587339 GEMIN4P57678 1058 aaKnown RBP20.27■□□□□ 0.84
TRIM47-204ENST00000587339 POLD3Q15054 466 aaPredicted RBP20.27■□□□□ 0.84
TRIM47-204ENST00000587339 RABGAP1LQ5R372 815 aa20.27■□□□□ 0.84
TRIM47-204ENST00000587339 TAOK1Q7L7X3 1001 aa20.27■□□□□ 0.84
TRIM47-204ENST00000587339 ZNF354CQ86Y25 554 aa20.27■□□□□ 0.84
TRIM47-204ENST00000587339 TDRPQ86YL5 185 aa20.27■□□□□ 0.84
TRIM47-204ENST00000587339 XPO6Q96QU8 1125 aaKnown RBP20.27■□□□□ 0.84
TRIM47-204ENST00000587339 EBNA1BP2Q99848 306 aaKnown RBP20.27■□□□□ 0.84
TRIM47-204ENST00000587339 FETUBQ9UGM5 382 aa20.27■□□□□ 0.84
TRIM47-204ENST00000587339 DOCK4Q8N1I0 1966 aa20.27■□□□□ 0.84
TRIM47-204ENST00000587339 TCRBV9S1A1TA0A576 114 aa20.27■□□□□ 0.84
TRIM47-204ENST00000587339 SUN1O94901 812 aa20.27■□□□□ 0.84
TRIM47-204ENST00000587339 HDCP19113 662 aa20.27■□□□□ 0.84
TRIM47-204ENST00000587339 MMP13P45452 471 aa20.27■□□□□ 0.84
TRIM47-204ENST00000587339 SMAD3P84022 425 aaKnown RBP20.27■□□□□ 0.84
TRIM47-204ENST00000587339 UBE3AQ05086 875 aa20.27■□□□□ 0.84
TRIM47-204ENST00000587339 SPARCL1Q14515 664 aa20.27■□□□□ 0.84
TRIM47-204ENST00000587339 PARP15Q460N3 678 aa20.27■□□□□ 0.84
TRIM47-204ENST00000587339 ADGRF1Q5T601 910 aa20.27■□□□□ 0.84
TRIM47-204ENST00000587339 KCTD11Q693B1 232 aa20.27■□□□□ 0.84
TRIM47-204ENST00000587339 TXNDC8Q6A555 127 aa20.27■□□□□ 0.84
TRIM47-204ENST00000587339 MPP5Q8N3R9 675 aa20.27■□□□□ 0.84
TRIM47-204ENST00000587339 ARL14EPQ8N8R7 260 aaPredicted RBP20.27■□□□□ 0.84
TRIM47-204ENST00000587339 MRPS31Q92665 395 aaKnown RBP20.27■□□□□ 0.84
TRIM47-204ENST00000587339 ARHGEF2Q92974 986 aaKnown RBP20.27■□□□□ 0.84
TRIM47-204ENST00000587339 ZNF419Q96HQ0 510 aaPredicted RBP20.27■□□□□ 0.84
TRIM47-204ENST00000587339 SLC22A12Q96S37 553 aa20.27■□□□□ 0.84
TRIM47-204ENST00000587339 CYTH2Q99418 400 aa20.27■□□□□ 0.84
TRIM47-204ENST00000587339 CAPS2Q9BXY5 557 aa20.27■□□□□ 0.84
TRIM47-204ENST00000587339 RBM22Q9NW64 420 aaKnown RBP eCLIP20.27■□□□□ 0.84
TRIM47-204ENST00000587339 EURLQ9NYK6 297 aa20.27■□□□□ 0.84
TRIM47-204ENST00000587339 SLC24A2Q9UI40 661 aa20.27■□□□□ 0.84
TRIM47-204ENST00000587339 AGO1Q9UL18 857 aaKnown RBP20.27■□□□□ 0.84
TRIM47-204ENST00000587339 ZFP37Q9Y6Q3 630 aaPredicted RBP20.27■□□□□ 0.84
TRIM47-204ENST00000587339 SDR42E2A6NKP2 422 aa20.26■□□□□ 0.83
TRIM47-204ENST00000587339 LPXNO60711 386 aa20.26■□□□□ 0.83
TRIM47-204ENST00000587339 SESN2P58004 480 aaPredicted RBP20.26■□□□□ 0.83
TRIM47-204ENST00000587339 YBEYP58557 167 aaPredicted RBP20.26■□□□□ 0.83
TRIM47-204ENST00000587339 HNRNPDQ14103 355 aaKnown RBP20.26■□□□□ 0.83
TRIM47-204ENST00000587339 GAREM2Q75VX8 874 aa20.26■□□□□ 0.83
TRIM47-204ENST00000587339 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.26■□□□□ 0.83
TRIM47-204ENST00000587339 MAML1Q92585 1016 aa20.26■□□□□ 0.83
TRIM47-204ENST00000587339 MRRFQ96E11 262 aaKnown RBP20.26■□□□□ 0.83
TRIM47-204ENST00000587339 MLPHQ9BV36 600 aaPredicted RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms