RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 CDH4P55283 916 aa15.3■□□□□ 0.04
NFIX-208ENST00000587260 GALNT2Q10471 571 aa15.3■□□□□ 0.04
NFIX-208ENST00000587260 SNX1Q13596 522 aa15.3■□□□□ 0.04
NFIX-208ENST00000587260 RUNX3Q13761 415 aa15.3■□□□□ 0.04
NFIX-208ENST00000587260 PDK1Q15118 436 aa15.3■□□□□ 0.04
NFIX-208ENST00000587260 CHST9Q7L1S5 443 aa15.3■□□□□ 0.04
NFIX-208ENST00000587260 SLC44A3Q8N4M1 653 aa15.3■□□□□ 0.04
NFIX-208ENST00000587260 GPR161Q8N6U8 529 aaKnown RBP15.3■□□□□ 0.04
NFIX-208ENST00000587260 NAT16Q8N8M0 369 aa15.3■□□□□ 0.04
NFIX-208ENST00000587260 CELF6Q96J87 481 aaKnown RBP15.3■□□□□ 0.04
NFIX-208ENST00000587260 FAM118BQ9BPY3 351 aa15.3■□□□□ 0.04
NFIX-208ENST00000587260 ECT2Q9H8V3 914 aa15.3■□□□□ 0.04
NFIX-208ENST00000587260 IGSF9Q9P2J2 1179 aa15.3■□□□□ 0.04
NFIX-208ENST00000587260 CLEC4EQ9ULY5 219 aa15.3■□□□□ 0.04
NFIX-208ENST00000587260 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.29■□□□□ 0.04
NFIX-208ENST00000587260 CFAP69A5D8W1 941 aa15.29■□□□□ 0.04
NFIX-208ENST00000587260 H0Y626 953 aa15.29■□□□□ 0.04
NFIX-208ENST00000587260 ARNTLO00327 626 aa15.29■□□□□ 0.04
NFIX-208ENST00000587260 NARSO43776 548 aaKnown RBP15.29■□□□□ 0.04
NFIX-208ENST00000587260 CLDN11O75508 207 aa15.29■□□□□ 0.04
NFIX-208ENST00000587260 ECEL1O95672 775 aa15.29■□□□□ 0.04
NFIX-208ENST00000587260 PENKP01210 267 aaPredicted RBP15.29■□□□□ 0.04
NFIX-208ENST00000587260 MX2P20592 715 aa15.29■□□□□ 0.04
NFIX-208ENST00000587260 NDST2P52849 883 aa15.29■□□□□ 0.04
NFIX-208ENST00000587260 GAD2Q05329 585 aa15.29■□□□□ 0.04
NFIX-208ENST00000587260 ZNF33AQ06730 810 aa15.29■□□□□ 0.04
NFIX-208ENST00000587260 ZNF177Q13360 481 aaPredicted RBP15.29■□□□□ 0.04
NFIX-208ENST00000587260 MPP7Q5T2T1 576 aa15.29■□□□□ 0.04
NFIX-208ENST00000587260 C12orf40Q86WS4 652 aa15.29■□□□□ 0.04
NFIX-208ENST00000587260 JAMLQ86YT9 394 aa15.29■□□□□ 0.04
NFIX-208ENST00000587260 LRRC49Q8IUZ0 686 aa15.29■□□□□ 0.04
NFIX-208ENST00000587260 ARHGAP12Q8IWW6 846 aa15.29■□□□□ 0.04
NFIX-208ENST00000587260 ALLCQ8N6M5 410 aa15.29■□□□□ 0.04
NFIX-208ENST00000587260 RUBCNQ92622 972 aa15.29■□□□□ 0.04
NFIX-208ENST00000587260 ANKZF1Q9H8Y5 726 aa15.29■□□□□ 0.04
NFIX-208ENST00000587260 MARK1Q9P0L2 795 aa15.29■□□□□ 0.04
NFIX-208ENST00000587260 PRKAG3Q9UGI9 489 aa15.29■□□□□ 0.04
NFIX-208ENST00000587260 ZNF148Q9UQR1 794 aa15.29■□□□□ 0.04
NFIX-208ENST00000587260 SHROOM3Q8TF72 1996 aa15.29■□□□□ 0.04
NFIX-208ENST00000587260 MYO10Q9HD67 2058 aa15.28■□□□□ 0.04
NFIX-208ENST00000587260 TTI1O43156 1089 aa15.28■□□□□ 0.04
NFIX-208ENST00000587260 GAS8O95995 478 aa15.28■□□□□ 0.04
NFIX-208ENST00000587260 TUBBP07437 444 aa15.28■□□□□ 0.04
NFIX-208ENST00000587260 RHOCP08134 193 aa15.28■□□□□ 0.04
NFIX-208ENST00000587260 SOX9P48436 509 aa15.28■□□□□ 0.04
NFIX-208ENST00000587260 PRKD1Q15139 912 aaPredicted RBP15.28■□□□□ 0.04
NFIX-208ENST00000587260 SLC45A4Q5BKX6 768 aa15.28■□□□□ 0.04
NFIX-208ENST00000587260 FSCBQ5H9T9 825 aa15.28■□□□□ 0.04
NFIX-208ENST00000587260 RNF43Q68DV7 783 aa15.28■□□□□ 0.04
NFIX-208ENST00000587260 CXorf57Q6NSI4 855 aaKnown RBP15.28■□□□□ 0.04
NFIX-208ENST00000587260 ZC3H18Q86VM9 953 aaKnown RBP15.28■□□□□ 0.04
NFIX-208ENST00000587260 CDKL3Q8IVW4 592 aaPredicted RBP15.28■□□□□ 0.04
NFIX-208ENST00000587260 CCDC117Q8IWD4 279 aaPredicted RBP15.28■□□□□ 0.04
NFIX-208ENST00000587260 TP53INP2Q8IXH6 220 aa15.28■□□□□ 0.04
NFIX-208ENST00000587260 OR52K2Q8NGK3 314 aa15.28■□□□□ 0.04
NFIX-208ENST00000587260 CSGALNACT1Q8TDX6 532 aa15.28■□□□□ 0.04
NFIX-208ENST00000587260 ATXN2LQ8WWM7 1075 aaKnown RBP15.28■□□□□ 0.04
NFIX-208ENST00000587260 SEC14L1Q92503 715 aa15.28■□□□□ 0.04
NFIX-208ENST00000587260 NXPE3Q969Y0 559 aa15.28■□□□□ 0.04
NFIX-208ENST00000587260 HDAC11Q96DB2 347 aa15.28■□□□□ 0.04
NFIX-208ENST00000587260 RTP4Q96DX8 246 aa15.28■□□□□ 0.04
NFIX-208ENST00000587260 USP29Q9HBJ7 922 aa15.28■□□□□ 0.04
NFIX-208ENST00000587260 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.28■□□□□ 0.04
NFIX-208ENST00000587260 DMGDHQ9UI17 866 aaKnown RBP15.28■□□□□ 0.04
NFIX-208ENST00000587260 V9GYY5 206 aaPredicted RBP15.28■□□□□ 0.04
NFIX-208ENST00000587260 H7C0C1 242 aa15.27■□□□□ 0.04
NFIX-208ENST00000587260 DFFAO00273 331 aa15.27■□□□□ 0.04
NFIX-208ENST00000587260 PPP1R12AO14974 1030 aaPredicted RBP15.27■□□□□ 0.04
NFIX-208ENST00000587260 TRIM24O15164 1050 aa15.27■□□□□ 0.04
NFIX-208ENST00000587260 HOXC11O43248 304 aaPredicted RBP15.27■□□□□ 0.04
NFIX-208ENST00000587260 RHOXF2BP0C7M4 288 aa15.27■□□□□ 0.04
NFIX-208ENST00000587260 ATP5OP48047 213 aa15.27■□□□□ 0.04
NFIX-208ENST00000587260 DRG2P55039 364 aaKnown RBP15.27■□□□□ 0.04
NFIX-208ENST00000587260 YBEYP58557 167 aaPredicted RBP15.27■□□□□ 0.04
NFIX-208ENST00000587260 PPIDQ08752 370 aaKnown RBP15.27■□□□□ 0.04
NFIX-208ENST00000587260 GAB4Q2WGN9 574 aa15.27■□□□□ 0.04
NFIX-208ENST00000587260 ITPRIPL2Q3MIP1 535 aa15.27■□□□□ 0.04
NFIX-208ENST00000587260 C6orf118Q5T5N4 469 aa15.27■□□□□ 0.04
NFIX-208ENST00000587260 NAIF1Q69YI7 327 aaPredicted RBP15.27■□□□□ 0.04
NFIX-208ENST00000587260 DARS2Q6PI48 645 aaKnown RBP15.27■□□□□ 0.04
NFIX-208ENST00000587260 LRRN4Q8WUT4 740 aa15.27■□□□□ 0.04
NFIX-208ENST00000587260 TFB1MQ8WVM0 346 aaKnown RBP15.27■□□□□ 0.04
NFIX-208ENST00000587260 TSGA13Q96PP4 275 aa15.27■□□□□ 0.04
NFIX-208ENST00000587260 QKIQ96PU8 341 aaKnown RBP eCLIP15.27■□□□□ 0.04
NFIX-208ENST00000587260 ASB2Q96Q27 587 aa15.27■□□□□ 0.04
NFIX-208ENST00000587260 RHOXF2Q9BQY4 288 aa15.27■□□□□ 0.04
NFIX-208ENST00000587260 ERP44Q9BS26 406 aa15.27■□□□□ 0.04
NFIX-208ENST00000587260 TMEM121Q9BTD3 319 aa15.27■□□□□ 0.04
NFIX-208ENST00000587260 NOL6Q9H6R4 1146 aaKnown RBP15.27■□□□□ 0.04
NFIX-208ENST00000587260 DNAJC17Q9NVM6 304 aaKnown RBP15.27■□□□□ 0.04
NFIX-208ENST00000587260 TBC1D30Q9Y2I9 924 aa15.27■□□□□ 0.04
NFIX-208ENST00000587260 CHD5Q8TDI0 1954 aa15.27■□□□□ 0.04
NFIX-208ENST00000587260 NUP205Q92621 2012 aa15.27■□□□□ 0.04
NFIX-208ENST00000587260 CACNG3O60359 315 aa15.27■□□□□ 0.03
NFIX-208ENST00000587260 RAMP2O60895 175 aa15.27■□□□□ 0.03
NFIX-208ENST00000587260 HEXIM1O94992 359 aaKnown RBP15.27■□□□□ 0.03
NFIX-208ENST00000587260 CD70P32970 193 aa15.27■□□□□ 0.03
NFIX-208ENST00000587260 GJA4P35212 333 aa15.27■□□□□ 0.03
NFIX-208ENST00000587260 CSKP41240 450 aa15.27■□□□□ 0.03
NFIX-208ENST00000587260 GARSP41250 739 aaKnown RBP15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms