RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 RFWD3Q6PCD5 774 aa12.71□□□□□ -0.38
SMARCA4-208ENST00000585799 PACS1Q6VY07 963 aa12.71□□□□□ -0.38
SMARCA4-208ENST00000585799 TLR8Q9NR97 1041 aaKnown RBP12.71□□□□□ -0.38
SMARCA4-208ENST00000585799 RUVBL2Q9Y230 463 aaKnown RBP12.71□□□□□ -0.38
SMARCA4-208ENST00000585799 PSME4Q14997 1843 aa12.71□□□□□ -0.38
SMARCA4-208ENST00000585799 RAMP2O60895 175 aa12.7□□□□□ -0.38
SMARCA4-208ENST00000585799 CD86P42081 329 aa12.7□□□□□ -0.38
SMARCA4-208ENST00000585799 GEMP55040 296 aa12.7□□□□□ -0.38
SMARCA4-208ENST00000585799 ZNF470Q6ECI4 717 aa12.7□□□□□ -0.38
SMARCA4-208ENST00000585799 TTC9BQ8N6N2 239 aa12.7□□□□□ -0.38
SMARCA4-208ENST00000585799 CCT6BQ92526 530 aa12.7□□□□□ -0.38
SMARCA4-208ENST00000585799 WWP1Q9H0M0 922 aa12.7□□□□□ -0.38
SMARCA4-208ENST00000585799 AAR2Q9Y312 384 aaKnown RBP12.7□□□□□ -0.38
SMARCA4-208ENST00000585799 TLL2Q9Y6L7 1015 aa12.7□□□□□ -0.38
SMARCA4-208ENST00000585799 TRIP12Q14669 1992 aaPredicted RBP12.7□□□□□ -0.38
SMARCA4-208ENST00000585799 F5H5T6 163 aa12.7□□□□□ -0.38
SMARCA4-208ENST00000585799 GLRA3O75311 464 aa12.7□□□□□ -0.38
SMARCA4-208ENST00000585799 RPLP2P05387 115 aaKnown RBP12.7□□□□□ -0.38
SMARCA4-208ENST00000585799 ITGA2BP08514 1039 aa12.7□□□□□ -0.38
SMARCA4-208ENST00000585799 PLK1P53350 603 aa12.7□□□□□ -0.38
SMARCA4-208ENST00000585799 NSUN2Q08J23 767 aaKnown RBP eCLIP12.7□□□□□ -0.38
SMARCA4-208ENST00000585799 CREBZFQ9NS37 354 aa12.7□□□□□ -0.38
SMARCA4-208ENST00000585799 L3MBTL1Q9Y468 752 aa12.7□□□□□ -0.38
SMARCA4-208ENST00000585799 TYW5A2RUC4 315 aaKnown RBP12.7□□□□□ -0.38
SMARCA4-208ENST00000585799 SPECC1L-ADORA2AF8WAN1 911 aa12.7□□□□□ -0.38
SMARCA4-208ENST00000585799 TLR5O60602 858 aa12.7□□□□□ -0.38
SMARCA4-208ENST00000585799 ALDH1A3P47895 512 aa12.7□□□□□ -0.38
SMARCA4-208ENST00000585799 TWF1Q12792 350 aa12.7□□□□□ -0.38
SMARCA4-208ENST00000585799 PLD1Q13393 1074 aa12.7□□□□□ -0.38
SMARCA4-208ENST00000585799 ARHGAP24Q8N264 748 aa12.7□□□□□ -0.38
SMARCA4-208ENST00000585799 HDAC11Q96DB2 347 aa12.7□□□□□ -0.38
SMARCA4-208ENST00000585799 TMEM30AQ9NV96 361 aa12.7□□□□□ -0.38
SMARCA4-208ENST00000585799 MTMR10Q9NXD2 777 aa12.7□□□□□ -0.38
SMARCA4-208ENST00000585799 ADAM28Q9UKQ2 775 aa12.7□□□□□ -0.38
SMARCA4-208ENST00000585799 SLC2A3P11169 496 aa12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 RALBP11234 206 aa12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 HOXD8P13378 290 aaPredicted RBP12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 CPA3P15088 417 aa12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 CYP2C18P33260 490 aa12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 POLD3Q15054 466 aaPredicted RBP12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 MYLK4Q86YV6 388 aaPredicted RBP12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 POU5F2Q8N7G0 328 aa12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 TTC8Q8TAM2 541 aa12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 MTBPQ96DY7 904 aa12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 SIGLEC10Q96LC7 697 aa12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 TBL1YQ9BQ87 522 aa12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 CYLDQ9NQC7 956 aa12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 DONSONQ9NYP3 566 aa12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 TRHDEQ9UKU6 1024 aa12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 SSX2IPQ9Y2D8 614 aa12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 PSAT1Q9Y617 370 aa12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 CFAP73A6NFT4 308 aa12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 CHUKO15111 745 aa12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 DGKIO75912 1065 aa12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 SELPP16109 830 aa12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 PAPOLAP51003 745 aaKnown RBP12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 ATXN3P54252 364 aaPredicted RBP12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 CDK16Q00536 496 aa12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 ZBTB17Q13105 803 aa12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 PIGWQ7Z7B1 504 aa12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 LINC00523Q86TU6 105 aa12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 LDB1Q86U70 411 aaPredicted RBP12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 NPWQ8N729 165 aa12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 SKA2Q8WVK7 121 aaPredicted RBP12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 NDNQ99608 321 aa12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 SLC39A8Q9C0K1 460 aa12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 FAM124BQ9H5Z6 455 aaPredicted RBP12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 SRRM3A6NNA2 597 aaPredicted RBP12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 TCEA3O75764 348 aa12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 TPSB2P20231 275 aa12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 CSHL1Q14406 222 aa12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 TPSAB1Q15661 275 aa12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 MON1AQ86VX9 555 aa12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 TDRPQ86YL5 185 aa12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 PNPLA1Q8N8W4 532 aa12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 KCTD13Q8WZ19 329 aa12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 KCNN1Q92952 543 aa12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 OMDQ99983 421 aa12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 NMUR1Q9HB89 426 aa12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 NOD2Q9HC29 1040 aa12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 FAM8A1Q9UBU6 413 aa12.69□□□□□ -0.38
SMARCA4-208ENST00000585799 FCHO1O14526 889 aa12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 FSBPO95073 299 aa12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 SP100P23497 879 aaPredicted RBP12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 RASA2Q15283 850 aa12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 ACCSLQ4AC99 568 aa12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 ANKRD20A4Q4UJ75 823 aa12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 LRRC8BQ6P9F7 803 aa12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 C14orf80Q86SX3 495 aa12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 CCNJLQ8IV13 435 aa12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 BANPQ8N9N5 519 aa12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 GSTCDQ8NEC7 633 aa12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 UROC1Q96N76 676 aa12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 TSPAN18Q96SJ8 248 aa12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 THTPAQ9BU02 230 aa12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 HIPK3Q9H422 1215 aa12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 NUP205Q92621 2012 aa12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 A8MUI8 341 aa12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 E9PAM4 449 aa12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 GIPC1O14908 333 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms