RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 FEM1AQ9BSK4 669 aa15.46■□□□□ 0.07
VAPA-209ENST00000585042 DDIT4Q9NX09 232 aa15.46■□□□□ 0.07
VAPA-209ENST00000585042 PLXNA2O75051 1894 aa15.46■□□□□ 0.06
VAPA-209ENST00000585042 KNTC1P50748 2209 aa15.45■□□□□ 0.06
VAPA-209ENST00000585042 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.45■□□□□ 0.06
VAPA-209ENST00000585042 ENC1O14682 589 aa15.45■□□□□ 0.06
VAPA-209ENST00000585042 MCF2LO15068 1137 aa15.45■□□□□ 0.06
VAPA-209ENST00000585042 CLDN11O75508 207 aa15.45■□□□□ 0.06
VAPA-209ENST00000585042 PRKCSHP14314 528 aaPredicted RBP15.45■□□□□ 0.06
VAPA-209ENST00000585042 PDGFRAP16234 1089 aa15.45■□□□□ 0.06
VAPA-209ENST00000585042 DRD3P35462 400 aa15.45■□□□□ 0.06
VAPA-209ENST00000585042 STX17P56962 302 aa15.45■□□□□ 0.06
VAPA-209ENST00000585042 NXPH1P58417 271 aa15.45■□□□□ 0.06
VAPA-209ENST00000585042 CYP4F3Q08477 520 aa15.45■□□□□ 0.06
VAPA-209ENST00000585042 CCDC15Q0P6D6 951 aa15.45■□□□□ 0.06
VAPA-209ENST00000585042 ZNF177Q13360 481 aaPredicted RBP15.45■□□□□ 0.06
VAPA-209ENST00000585042 SHBQ15464 509 aa15.45■□□□□ 0.06
VAPA-209ENST00000585042 C5orf22Q49AR2 442 aa15.45■□□□□ 0.06
VAPA-209ENST00000585042 ACBD5Q5T8D3 534 aaPredicted RBP15.45■□□□□ 0.06
VAPA-209ENST00000585042 NAPEPLDQ6IQ20 393 aa15.45■□□□□ 0.06
VAPA-209ENST00000585042 CXorf57Q6NSI4 855 aaKnown RBP15.45■□□□□ 0.06
VAPA-209ENST00000585042 FBXL22Q6P050 247 aa15.45■□□□□ 0.06
VAPA-209ENST00000585042 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.45■□□□□ 0.06
VAPA-209ENST00000585042 GBP6Q6ZN66 633 aa15.45■□□□□ 0.06
VAPA-209ENST00000585042 C11orf57Q6ZUT1 292 aaPredicted RBP15.45■□□□□ 0.06
VAPA-209ENST00000585042 PDZD3Q86UT5 571 aa15.45■□□□□ 0.06
VAPA-209ENST00000585042 DEFB106AQ8N104 65 aa15.45■□□□□ 0.06
VAPA-209ENST00000585042 CACTIN-AS1Q8N1I8 211 aa15.45■□□□□ 0.06
VAPA-209ENST00000585042 SHC3Q92529 594 aa15.45■□□□□ 0.06
VAPA-209ENST00000585042 RNF34Q969K3 372 aa15.45■□□□□ 0.06
VAPA-209ENST00000585042 ALG14Q96F25 216 aa15.45■□□□□ 0.06
VAPA-209ENST00000585042 FAM204AQ9H8W3 233 aa15.45■□□□□ 0.06
VAPA-209ENST00000585042 RRN3Q9NYV6 651 aa15.45■□□□□ 0.06
VAPA-209ENST00000585042 ARHGAP20Q9P2F6 1191 aa15.45■□□□□ 0.06
VAPA-209ENST00000585042 APEX2Q9UBZ4 518 aa15.45■□□□□ 0.06
VAPA-209ENST00000585042 RWDD2AQ9UIY3 292 aa15.45■□□□□ 0.06
VAPA-209ENST00000585042 SLC25A13Q9UJS0 675 aa15.45■□□□□ 0.06
VAPA-209ENST00000585042 PPM1HQ9ULR3 514 aa15.45■□□□□ 0.06
VAPA-209ENST00000585042 RAXQ9Y2V3 346 aa15.45■□□□□ 0.06
VAPA-209ENST00000585042 GOLGA4Q13439 2230 aaKnown RBP15.45■□□□□ 0.06
VAPA-209ENST00000585042 BAHCC1Q9P281 2608 aa15.44■□□□□ 0.06
VAPA-209ENST00000585042 URB1O60287 2271 aaKnown RBP15.44■□□□□ 0.06
VAPA-209ENST00000585042 A0A087WV48 116 aa15.44■□□□□ 0.06
VAPA-209ENST00000585042 BECN2A8MW95 431 aa15.44■□□□□ 0.06
VAPA-209ENST00000585042 BIN1O00499 593 aa15.44■□□□□ 0.06
VAPA-209ENST00000585042 PLRG1O43660 514 aaKnown RBP15.44■□□□□ 0.06
VAPA-209ENST00000585042 RNGTTO60942 597 aaKnown RBP15.44■□□□□ 0.06
VAPA-209ENST00000585042 HOXB3P14651 431 aaPredicted RBP15.44■□□□□ 0.06
VAPA-209ENST00000585042 NOS2P35228 1153 aa15.44■□□□□ 0.06
VAPA-209ENST00000585042 HNF1BP35680 557 aa15.44■□□□□ 0.06
VAPA-209ENST00000585042 STK19P49842 368 aaPredicted RBP15.44■□□□□ 0.06
VAPA-209ENST00000585042 PITX1P78337 314 aaPredicted RBP15.44■□□□□ 0.06
VAPA-209ENST00000585042 IL9RQ01113 521 aa15.44■□□□□ 0.06
VAPA-209ENST00000585042 PTK2Q05397 1052 aa15.44■□□□□ 0.06
VAPA-209ENST00000585042 ILKQ13418 452 aa15.44■□□□□ 0.06
VAPA-209ENST00000585042 AUHQ13825 339 aaKnown RBP15.44■□□□□ 0.06
VAPA-209ENST00000585042 ACAP1Q15027 740 aa15.44■□□□□ 0.06
VAPA-209ENST00000585042 TAF5Q15542 800 aa15.44■□□□□ 0.06
VAPA-209ENST00000585042 COL28A1Q2UY09 1125 aa15.44■□□□□ 0.06
VAPA-209ENST00000585042 NEK5Q6P3R8 708 aa15.44■□□□□ 0.06
VAPA-209ENST00000585042 C19orf48Q6RUI8 117 aa15.44■□□□□ 0.06
VAPA-209ENST00000585042 DHRS13Q6UX07 377 aa15.44■□□□□ 0.06
VAPA-209ENST00000585042 TRIM69Q86WT6 500 aa15.44■□□□□ 0.06
VAPA-209ENST00000585042 ZDHHC17Q8IUH5 632 aa15.44■□□□□ 0.06
VAPA-209ENST00000585042 ZNF397Q8NF99 534 aaPredicted RBP15.44■□□□□ 0.06
VAPA-209ENST00000585042 TSC1Q92574 1164 aa15.44■□□□□ 0.06
VAPA-209ENST00000585042 CNDP2Q96KP4 475 aaKnown RBP15.44■□□□□ 0.06
VAPA-209ENST00000585042 RPRD1AQ96P16 312 aaPredicted RBP15.44■□□□□ 0.06
VAPA-209ENST00000585042 CPXM1Q96SM3 734 aa15.44■□□□□ 0.06
VAPA-209ENST00000585042 TBC1D30Q9Y2I9 924 aa15.44■□□□□ 0.06
VAPA-209ENST00000585042 FARP1Q9Y4F1 1045 aaPredicted RBP15.44■□□□□ 0.06
VAPA-209ENST00000585042 OR51B4Q9Y5P0 310 aa15.44■□□□□ 0.06
VAPA-209ENST00000585042 LAMA5O15230 3695 aa15.44■□□□□ 0.06
VAPA-209ENST00000585042 APC2O95996 2303 aa15.44■□□□□ 0.06
VAPA-209ENST00000585042 C1QTNF3-AMACRE9PGA6 284 aa15.43■□□□□ 0.06
VAPA-209ENST00000585042 WNT9AO14904 365 aa15.43■□□□□ 0.06
VAPA-209ENST00000585042 RFPL3O75679 317 aa15.43■□□□□ 0.06
VAPA-209ENST00000585042 JUPP14923 745 aa15.43■□□□□ 0.06
VAPA-209ENST00000585042 SLC9A1P19634 815 aa15.43■□□□□ 0.06
VAPA-209ENST00000585042 EPHA8P29322 1005 aaPredicted RBP15.43■□□□□ 0.06
VAPA-209ENST00000585042 CDH4P55283 916 aa15.43■□□□□ 0.06
VAPA-209ENST00000585042 STAT4Q14765 748 aa15.43■□□□□ 0.06
VAPA-209ENST00000585042 DLG2Q15700 870 aa15.43■□□□□ 0.06
VAPA-209ENST00000585042 EXOC3L4Q17RC7 722 aa15.43■□□□□ 0.06
VAPA-209ENST00000585042 ACCSLQ4AC99 568 aa15.43■□□□□ 0.06
VAPA-209ENST00000585042 SLC26A9Q7LBE3 791 aa15.43■□□□□ 0.06
VAPA-209ENST00000585042 GATAD2AQ86YP4 633 aa15.43■□□□□ 0.06
VAPA-209ENST00000585042 C1orf131Q8NDD1 294 aaKnown RBP15.43■□□□□ 0.06
VAPA-209ENST00000585042 CRACR2AQ9BSW2 395 aa15.43■□□□□ 0.06
VAPA-209ENST00000585042 PREBQ9HCU5 417 aa15.43■□□□□ 0.06
VAPA-209ENST00000585042 ACP6Q9NPH0 428 aa15.43■□□□□ 0.06
VAPA-209ENST00000585042 PRAMEF26H0Y7S4 382 aa15.42■□□□□ 0.06
VAPA-209ENST00000585042 F9P00740 461 aa15.42■□□□□ 0.06
VAPA-209ENST00000585042 VAV1P15498 845 aa15.42■□□□□ 0.06
VAPA-209ENST00000585042 ZNF18P17022 549 aa15.42■□□□□ 0.06
VAPA-209ENST00000585042 PON1P27169 355 aa15.42■□□□□ 0.06
VAPA-209ENST00000585042 KRT9P35527 623 aa15.42■□□□□ 0.06
VAPA-209ENST00000585042 USP8P40818 1118 aa15.42■□□□□ 0.06
VAPA-209ENST00000585042 BPIFB4P59827 614 aa15.42■□□□□ 0.06
VAPA-209ENST00000585042 KRT83P78385 493 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms