RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 FAM20BO75063 409 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 TMCC2O75069 709 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 RTN3O95197 1032 aaPredicted RBP2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 VIPP01282 170 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 GAAP10253 952 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 SAT1P21673 171 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 CDC25AP30304 524 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 ZNF135P52742 658 aaPredicted RBP2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 RRP1P56182 461 aaKnown RBP2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 C21orf58P58505 322 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 SP3Q02447 781 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 MGAT2Q10469 447 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 SNAPC2Q13487 334 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 ST3GAL2Q16842 350 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 INTS11Q5TA45 600 aaKnown RBP2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 GALNT17Q6IS24 598 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 MRPL10Q7Z7H8 261 aaKnown RBP2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 FBXL16Q8N461 479 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 C8orf58Q8NAV2 365 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 USP38Q8NB14 1042 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 HMGB4Q8WW32 186 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 SOCS4Q8WXH5 440 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 PARK7Q99497 189 aaKnown RBP2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 SMOQ99835 787 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 KATNAL1Q9BW62 490 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 KRT23Q9C075 422 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 CD209Q9NNX6 404 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 ARHGEF3Q9NR81 526 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 DIAPH3Q9NSV4 1193 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 ECHDC1Q9NTX5 307 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 COG5Q9UP83 839 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 TTC36A6NLP5 189 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 TBKBP1A7MCY6 615 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 SEPT4O43236 478 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 ASNA1O43681 348 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 DKC1O60832 514 aaKnown RBP eCLIP2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 REC8O95072 547 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 ONECUT2O95948 504 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 ASNSP08243 561 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 RARBP10826 455 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 MYL6BP14649 208 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 CTSSP25774 331 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 KLRC1P26715 233 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 IL1R2P27930 398 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 PSMA5P28066 241 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 CPA2P48052 419 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 ACTR2P61160 394 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 CHRNDQ07001 517 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 EIF2B5Q13144 721 aaKnown RBP2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 SLC39A6Q13433 755 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 ANO7Q6IWH7 933 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 CPLX2Q6PUV4 134 aaKnown RBP2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 GSTA5Q7RTV2 222 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 MRGPREQ86SM8 312 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 ERO1BQ86YB8 467 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 DZIP1Q86YF9 867 aaKnown RBP2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 RAB11FIP4Q86YS3 637 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 TEX11Q8IYF3 940 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 NRSN1Q8IZ57 195 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 TMCO5AQ8N6Q1 288 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 PCYOX1LQ8NBM8 494 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 CCDC12Q8WUD4 166 aaPredicted RBP2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 ATRIPQ8WXE1 791 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 LARP4BQ92615 738 aaKnown RBP2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 ERP27Q96DN0 273 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 CDCA5Q96FF9 252 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 UROC1Q96N76 676 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 YME1L1Q96TA2 773 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 NCAPGQ9BPX3 1015 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 C1orf43Q9BWL3 253 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 SIL1Q9H173 461 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 RSPH9Q9H1X1 276 aaPredicted RBP2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 R3HDMLQ9H3Y0 253 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 ZWILCHQ9H900 591 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 ZBTB40Q9NUA8 1239 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 TMEM51Q9NW97 253 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 PLEKHM1Q9Y4G2 1056 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 CCDC171Q6TFL3 1326 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 ZMYM2Q9UBW7 1377 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 PNMA6EA0A0J9YXQ4 647 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 PYCARD-AS1I3L0S3 204 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 SYT5O00445 386 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 TOR1BO14657 336 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 PSMA7O14818 248 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 STRNO43815 780 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 TNFRSF6BO95407 300 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 LY86O95711 162 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 GPANK1O95872 356 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 IGKV5-2P06315 115 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 WEE2P0C1S8 567 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 HNRNPLP14866 589 aaKnown RBP eCLIP2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 ITGB6P18564 788 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 PCP4P48539 62 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 CACNA2D1P54289 1103 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 AP2B1P63010 937 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 FPGSQ05932 587 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 GPS1Q13098 491 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 BFSP2Q13515 415 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 CSHL1Q14406 222 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms