RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 ADRA1BP35368 520 aa10.17□□□□□ -0.78
SKA2-208ENST00000583927 PBX1P40424 430 aa10.17□□□□□ -0.78
SKA2-208ENST00000583927 CTSOP43234 321 aaPredicted RBP10.17□□□□□ -0.78
SKA2-208ENST00000583927 AIF1P55008 147 aa10.17□□□□□ -0.78
SKA2-208ENST00000583927 TPM4P67936 248 aa10.17□□□□□ -0.78
SKA2-208ENST00000583927 SCAPQ12770 1279 aa10.17□□□□□ -0.78
SKA2-208ENST00000583927 ELAVL3Q14576 367 aaKnown RBP10.17□□□□□ -0.78
SKA2-208ENST00000583927 ARL13BQ3SXY8 428 aa10.17□□□□□ -0.78
SKA2-208ENST00000583927 CCDC14Q49A88 953 aa10.17□□□□□ -0.78
SKA2-208ENST00000583927 PPP1R15BQ5SWA1 713 aa10.17□□□□□ -0.78
SKA2-208ENST00000583927 MANEALQ5VSG8 457 aa10.17□□□□□ -0.78
SKA2-208ENST00000583927 IL31Q6EBC2 164 aa10.17□□□□□ -0.78
SKA2-208ENST00000583927 ACAD10Q6JQN1 1059 aa10.17□□□□□ -0.78
SKA2-208ENST00000583927 WDR59Q6PJI9 974 aa10.17□□□□□ -0.78
SKA2-208ENST00000583927 CIR1Q86X95 450 aaPredicted RBP10.17□□□□□ -0.78
SKA2-208ENST00000583927 EMC1Q8N766 993 aa10.17□□□□□ -0.78
SKA2-208ENST00000583927 ZNF366Q8N895 744 aa10.17□□□□□ -0.78
SKA2-208ENST00000583927 C1orf216Q8TAB5 229 aa10.17□□□□□ -0.78
SKA2-208ENST00000583927 FAM131CQ96AQ9 280 aa10.17□□□□□ -0.78
SKA2-208ENST00000583927 NAP1L5Q96NT1 182 aaPredicted RBP10.17□□□□□ -0.78
SKA2-208ENST00000583927 FAM129BQ96TA1 746 aa10.17□□□□□ -0.78
SKA2-208ENST00000583927 C2orf49Q9BVC5 232 aaPredicted RBP10.17□□□□□ -0.78
SKA2-208ENST00000583927 GPR174Q9BXC1 333 aa10.17□□□□□ -0.78
SKA2-208ENST00000583927 ZDHHC5Q9C0B5 715 aa10.17□□□□□ -0.78
SKA2-208ENST00000583927 BTBD1Q9H0C5 482 aa10.17□□□□□ -0.78
SKA2-208ENST00000583927 PABPC3Q9H361 631 aaKnown RBP10.17□□□□□ -0.78
SKA2-208ENST00000583927 SMOC1Q9H4F8 434 aa10.17□□□□□ -0.78
SKA2-208ENST00000583927 CBX8Q9HC52 389 aa10.17□□□□□ -0.78
SKA2-208ENST00000583927 OSGEPQ9NPF4 335 aa10.17□□□□□ -0.78
SKA2-208ENST00000583927 SLCO3A1Q9UIG8 710 aa10.17□□□□□ -0.78
SKA2-208ENST00000583927 FZD4Q9ULV1 537 aa10.17□□□□□ -0.78
SKA2-208ENST00000583927 ASPMQ8IZT6 3477 aa10.16□□□□□ -0.78
SKA2-208ENST00000583927 A0A1B0GTW7 788 aa10.16□□□□□ -0.78
SKA2-208ENST00000583927 LRRC53A6NM62 1247 aa10.16□□□□□ -0.78
SKA2-208ENST00000583927 CNTN5O94779 1100 aa10.16□□□□□ -0.78
SKA2-208ENST00000583927 SERPINC1P01008 464 aa10.16□□□□□ -0.78
SKA2-208ENST00000583927 SYPP08247 313 aa10.16□□□□□ -0.78
SKA2-208ENST00000583927 GPD1P21695 349 aa10.16□□□□□ -0.78
SKA2-208ENST00000583927 C5AR1P21730 350 aa10.16□□□□□ -0.78
SKA2-208ENST00000583927 RFC1P35251 1148 aaPredicted RBP10.16□□□□□ -0.78
SKA2-208ENST00000583927 IRAK1P51617 712 aa10.16□□□□□ -0.78
SKA2-208ENST00000583927 CLCN6P51797 869 aa10.16□□□□□ -0.78
SKA2-208ENST00000583927 ZNF143P52747 638 aaPredicted RBP10.16□□□□□ -0.78
SKA2-208ENST00000583927 HDAC4P56524 1084 aa10.16□□□□□ -0.78
SKA2-208ENST00000583927 KRT83P78385 493 aa10.16□□□□□ -0.78
SKA2-208ENST00000583927 ATP11AP98196 1134 aa10.16□□□□□ -0.78
SKA2-208ENST00000583927 SLC20A2Q08357 652 aa10.16□□□□□ -0.78
SKA2-208ENST00000583927 CST6Q15828 149 aa10.16□□□□□ -0.78
SKA2-208ENST00000583927 C15orf59Q2T9L4 293 aaPredicted RBP10.16□□□□□ -0.78
SKA2-208ENST00000583927 ALFQ53S48 1182 aa10.16□□□□□ -0.78
SKA2-208ENST00000583927 C6orf118Q5T5N4 469 aa10.16□□□□□ -0.78
SKA2-208ENST00000583927 DAB2IPQ5VWQ8 1189 aa10.16□□□□□ -0.78
SKA2-208ENST00000583927 ARMCX6Q7L4S7 300 aa10.16□□□□□ -0.78
SKA2-208ENST00000583927 FAM131BQ86XD5 332 aa10.16□□□□□ -0.78
SKA2-208ENST00000583927 MCOLN2Q8IZK6 566 aa10.16□□□□□ -0.78
SKA2-208ENST00000583927 SH2D3CQ8N5H7 860 aa10.16□□□□□ -0.78
SKA2-208ENST00000583927 DCAF4L2Q8NA75 395 aa10.16□□□□□ -0.78
SKA2-208ENST00000583927 OR52K2Q8NGK3 314 aa10.16□□□□□ -0.78
SKA2-208ENST00000583927 JOSD2Q8TAC2 188 aa10.16□□□□□ -0.78
SKA2-208ENST00000583927 SYN2Q92777 582 aaPredicted RBP10.16□□□□□ -0.78
SKA2-208ENST00000583927 RPL10LQ96L21 214 aaKnown RBP10.16□□□□□ -0.78
SKA2-208ENST00000583927 SELENOOQ9BVL4 669 aa10.16□□□□□ -0.78
SKA2-208ENST00000583927 ZYG11BQ9C0D3 744 aa10.16□□□□□ -0.78
SKA2-208ENST00000583927 KDM4CQ9H3R0 1056 aa10.16□□□□□ -0.78
SKA2-208ENST00000583927 OR12D3Q9UGF7 316 aa10.16□□□□□ -0.78
SKA2-208ENST00000583927 SLC25A13Q9UJS0 675 aa10.16□□□□□ -0.78
SKA2-208ENST00000583927 NCKAP1Q9Y2A7 1128 aa10.16□□□□□ -0.78
SKA2-208ENST00000583927 ARID1BQ8NFD5 2236 aaPredicted RBP10.15□□□□□ -0.78
SKA2-208ENST00000583927 ACACBO00763 2458 aa10.15□□□□□ -0.78
SKA2-208ENST00000583927 CHD8Q9HCK8 2581 aa10.15□□□□□ -0.78
SKA2-208ENST00000583927 DCDC2BA2VCK2 349 aa10.15□□□□□ -0.78
SKA2-208ENST00000583927 ANKRD62A6NC57 917 aa10.15□□□□□ -0.78
SKA2-208ENST00000583927 C4orf47A7E2U8 309 aa10.15□□□□□ -0.78
SKA2-208ENST00000583927 TTC34A8MYJ7 566 aa10.15□□□□□ -0.78
SKA2-208ENST00000583927 ARHGAP33O14559 1287 aa10.15□□□□□ -0.78
SKA2-208ENST00000583927 MCF2LO15068 1137 aa10.15□□□□□ -0.78
SKA2-208ENST00000583927 SEMA4FO95754 770 aa10.15□□□□□ -0.78
SKA2-208ENST00000583927 RHOCP08134 193 aa10.15□□□□□ -0.78
SKA2-208ENST00000583927 ENGP17813 658 aa10.15□□□□□ -0.78
SKA2-208ENST00000583927 CSRP1P21291 193 aaKnown RBP10.15□□□□□ -0.78
SKA2-208ENST00000583927 TNFAIP3P21580 790 aa10.15□□□□□ -0.78
SKA2-208ENST00000583927 OR1E1P30953 314 aa10.15□□□□□ -0.78
SKA2-208ENST00000583927 ACSL1P33121 698 aa10.15□□□□□ -0.78
SKA2-208ENST00000583927 HTR7P34969 479 aa10.15□□□□□ -0.78
SKA2-208ENST00000583927 ETFBP38117 255 aa10.15□□□□□ -0.78
SKA2-208ENST00000583927 GGCXP38435 758 aa10.15□□□□□ -0.78
SKA2-208ENST00000583927 MAPKAPK2P49137 400 aa10.15□□□□□ -0.78
SKA2-208ENST00000583927 STK19P49842 368 aaPredicted RBP10.15□□□□□ -0.78
SKA2-208ENST00000583927 FANCCQ00597 558 aa10.15□□□□□ -0.78
SKA2-208ENST00000583927 GFPT1Q06210 699 aaPredicted RBP10.15□□□□□ -0.78
SKA2-208ENST00000583927 ZSCAN23Q3MJ62 389 aa10.15□□□□□ -0.78
SKA2-208ENST00000583927 DCAF12L1Q5VU92 463 aa10.15□□□□□ -0.78
SKA2-208ENST00000583927 SFMBT2Q5VUG0 894 aa10.15□□□□□ -0.78
SKA2-208ENST00000583927 PLEKHA7Q6IQ23 1121 aa10.15□□□□□ -0.78
SKA2-208ENST00000583927 DNAJC24Q6P3W2 148 aa10.15□□□□□ -0.78
SKA2-208ENST00000583927 DSG4Q86SJ6 1040 aa10.15□□□□□ -0.78
SKA2-208ENST00000583927 NLRP14Q86W24 1093 aa10.15□□□□□ -0.78
SKA2-208ENST00000583927 RGL4Q8IZJ4 473 aa10.15□□□□□ -0.78
SKA2-208ENST00000583927 FNIP1Q8TF40 1166 aa10.15□□□□□ -0.78
SKA2-208ENST00000583927 FAM172AQ8WUF8 416 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms