RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-223ENST00000583877 PRPF39Q86UA1 669 aaKnown RBP9.03□□□□□ -0.96
NUP85-223ENST00000583877 TBC1D3Q8IZP1 549 aaPredicted RBP9.03□□□□□ -0.96
NUP85-223ENST00000583877 LSMEM2Q8N112 164 aa9.03□□□□□ -0.96
NUP85-223ENST00000583877 STK40Q8N2I9 435 aa9.03□□□□□ -0.96
NUP85-223ENST00000583877 CARNMT1Q8N4J0 409 aa9.03□□□□□ -0.96
NUP85-223ENST00000583877 UBA3Q8TBC4 463 aa9.03□□□□□ -0.96
NUP85-223ENST00000583877 IRGQQ8WZA9 623 aa9.03□□□□□ -0.96
NUP85-223ENST00000583877 PTPRN2Q92932 1015 aa9.03□□□□□ -0.96
NUP85-223ENST00000583877 FAM131CQ96AQ9 280 aa9.03□□□□□ -0.96
NUP85-223ENST00000583877 HIC2Q96JB3 615 aa9.03□□□□□ -0.96
NUP85-223ENST00000583877 ARHGAP20Q9P2F6 1191 aa9.03□□□□□ -0.96
NUP85-223ENST00000583877 USP25Q9UHP3 1055 aa9.03□□□□□ -0.96
NUP85-223ENST00000583877 SLCO3A1Q9UIG8 710 aa9.03□□□□□ -0.96
NUP85-223ENST00000583877 KIAA1257Q9ULG3 409 aa9.03□□□□□ -0.96
NUP85-223ENST00000583877 DMTF1Q9Y222 760 aa9.03□□□□□ -0.96
NUP85-223ENST00000583877 CHD5Q8TDI0 1954 aa9.03□□□□□ -0.96
NUP85-223ENST00000583877 LRRK1Q38SD2 2015 aa9.02□□□□□ -0.97
NUP85-223ENST00000583877 O00370 1275 aa9.02□□□□□ -0.97
NUP85-223ENST00000583877 TRIM38O00635 465 aa9.02□□□□□ -0.97
NUP85-223ENST00000583877 SLC7A4O43246 635 aa9.02□□□□□ -0.97
NUP85-223ENST00000583877 SIGLEC6O43699 453 aa9.02□□□□□ -0.97
NUP85-223ENST00000583877 DXOO77932 396 aaKnown RBP9.02□□□□□ -0.97
NUP85-223ENST00000583877 RHOBTB3O94955 611 aa9.02□□□□□ -0.97
NUP85-223ENST00000583877 LUC7L3O95232 432 aaKnown RBP9.02□□□□□ -0.97
NUP85-223ENST00000583877 IL1BP01584 269 aa9.02□□□□□ -0.97
NUP85-223ENST00000583877 LTFP02788 710 aa9.02□□□□□ -0.97
NUP85-223ENST00000583877 LCP1P13796 627 aa9.02□□□□□ -0.97
NUP85-223ENST00000583877 CD19P15391 556 aa9.02□□□□□ -0.97
NUP85-223ENST00000583877 CTSOP43234 321 aaPredicted RBP9.02□□□□□ -0.97
NUP85-223ENST00000583877 ERVPABLB-1P60509 514 aa9.02□□□□□ -0.97
NUP85-223ENST00000583877 YWHAEP62258 255 aaKnown RBP9.02□□□□□ -0.97
NUP85-223ENST00000583877 LSM11P83369 360 aaKnown RBP eCLIP9.02□□□□□ -0.97
NUP85-223ENST00000583877 NNTQ13423 1086 aa9.02□□□□□ -0.97
NUP85-223ENST00000583877 CUL2Q13617 745 aa9.02□□□□□ -0.97
NUP85-223ENST00000583877 STAT4Q14765 748 aa9.02□□□□□ -0.97
NUP85-223ENST00000583877 ZCWPW2Q504Y3 356 aa9.02□□□□□ -0.97
NUP85-223ENST00000583877 HS1BP3Q53T59 392 aa9.02□□□□□ -0.97
NUP85-223ENST00000583877 MS4A13Q5J8X5 152 aa9.02□□□□□ -0.97
NUP85-223ENST00000583877 RNF219Q5W0B1 726 aaPredicted RBP9.02□□□□□ -0.97
NUP85-223ENST00000583877 ADGRD1Q6QNK2 874 aa9.02□□□□□ -0.97
NUP85-223ENST00000583877 LCLAT1Q6UWP7 414 aa9.02□□□□□ -0.97
NUP85-223ENST00000583877 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.02□□□□□ -0.97
NUP85-223ENST00000583877 MMS22LQ6ZRQ5 1243 aa9.02□□□□□ -0.97
NUP85-223ENST00000583877 SLC25A45Q8N413 288 aa9.02□□□□□ -0.97
NUP85-223ENST00000583877 GUF1Q8N442 669 aaKnown RBP9.02□□□□□ -0.97
NUP85-223ENST00000583877 LRRN4Q8WUT4 740 aa9.02□□□□□ -0.97
NUP85-223ENST00000583877 CCDC47Q96A33 483 aaKnown RBP9.02□□□□□ -0.97
NUP85-223ENST00000583877 MYEOVQ96EZ4 313 aa9.02□□□□□ -0.97
NUP85-223ENST00000583877 EEF2KMTQ96G04 330 aa9.02□□□□□ -0.97
NUP85-223ENST00000583877 RPL10LQ96L21 214 aaKnown RBP9.02□□□□□ -0.97
NUP85-223ENST00000583877 FCRL2Q96LA5 508 aaPredicted RBP9.02□□□□□ -0.97
NUP85-223ENST00000583877 CYTH4Q9UIA0 394 aa9.02□□□□□ -0.97
NUP85-223ENST00000583877 CFAP45Q9UL16 551 aa9.02□□□□□ -0.97
NUP85-223ENST00000583877 MAPK8IP1Q9UQF2 711 aa9.02□□□□□ -0.97
NUP85-223ENST00000583877 TLR6Q9Y2C9 796 aa9.02□□□□□ -0.97
NUP85-223ENST00000583877 CEP83Q9Y592 693 aa9.02□□□□□ -0.97
NUP85-223ENST00000583877 PRAMEF26H0Y7S4 382 aa9.01□□□□□ -0.97
NUP85-223ENST00000583877 K7ELQ4 463 aaPredicted RBP9.01□□□□□ -0.97
NUP85-223ENST00000583877 PLRG1O43660 514 aaKnown RBP9.01□□□□□ -0.97
NUP85-223ENST00000583877 RNGTTO60942 597 aaKnown RBP9.01□□□□□ -0.97
NUP85-223ENST00000583877 SDC3O75056 442 aa9.01□□□□□ -0.97
NUP85-223ENST00000583877 DGKAP23743 735 aa9.01□□□□□ -0.97
NUP85-223ENST00000583877 MAT2AP31153 395 aaKnown RBP9.01□□□□□ -0.97
NUP85-223ENST00000583877 NNMTP40261 264 aa9.01□□□□□ -0.97
NUP85-223ENST00000583877 RGS7P49802 495 aa9.01□□□□□ -0.97
NUP85-223ENST00000583877 DAB2P98082 770 aa9.01□□□□□ -0.97
NUP85-223ENST00000583877 SULT2A1Q06520 285 aa9.01□□□□□ -0.97
NUP85-223ENST00000583877 SLC12A1Q13621 1099 aa9.01□□□□□ -0.97
NUP85-223ENST00000583877 EDRF1Q3B7T1 1238 aa9.01□□□□□ -0.97
NUP85-223ENST00000583877 SETMARQ53H47 684 aaPredicted RBP9.01□□□□□ -0.97
NUP85-223ENST00000583877 DCAF6Q58WW2 860 aa9.01□□□□□ -0.97
NUP85-223ENST00000583877 ARHGAP40Q5TG30 622 aa9.01□□□□□ -0.97
NUP85-223ENST00000583877 CDCP2Q5VXM1 449 aa9.01□□□□□ -0.97
NUP85-223ENST00000583877 PMF1Q6P1K2 205 aa9.01□□□□□ -0.97
NUP85-223ENST00000583877 TRIM69Q86WT6 500 aa9.01□□□□□ -0.97
NUP85-223ENST00000583877 APCDD1Q8J025 514 aa9.01□□□□□ -0.97
NUP85-223ENST00000583877 CFAP52Q8N1V2 620 aa9.01□□□□□ -0.97
NUP85-223ENST00000583877 OR4C6Q8NH72 309 aa9.01□□□□□ -0.97
NUP85-223ENST00000583877 PRR7Q8TB68 274 aa9.01□□□□□ -0.97
NUP85-223ENST00000583877 SLC35F5Q8WV83 523 aa9.01□□□□□ -0.97
NUP85-223ENST00000583877 SNRNP27Q8WVK2 155 aaKnown RBP9.01□□□□□ -0.97
NUP85-223ENST00000583877 SLC39A13Q96H72 371 aa9.01□□□□□ -0.97
NUP85-223ENST00000583877 NAF1Q96HR8 494 aaKnown RBP9.01□□□□□ -0.97
NUP85-223ENST00000583877 SERPINB11Q96P15 392 aa9.01□□□□□ -0.97
NUP85-223ENST00000583877 DEPDC7Q96QD5 511 aa9.01□□□□□ -0.97
NUP85-223ENST00000583877 SPAG5Q96R06 1193 aa9.01□□□□□ -0.97
NUP85-223ENST00000583877 DPH1Q9BZG8 443 aa9.01□□□□□ -0.97
NUP85-223ENST00000583877 NUCKS1Q9H1E3 243 aaKnown RBP9.01□□□□□ -0.97
NUP85-223ENST00000583877 CPNE5Q9HCH3 593 aa9.01□□□□□ -0.97
NUP85-223ENST00000583877 RCOR1Q9UKL0 485 aa9.01□□□□□ -0.97
NUP85-223ENST00000583877 COQ4Q9Y3A0 265 aa9.01□□□□□ -0.97
NUP85-223ENST00000583877 PCDHB1Q9Y5F3 818 aa9.01□□□□□ -0.97
NUP85-223ENST00000583877 A0A1B0GVL5 298 aa9□□□□□ -0.97
NUP85-223ENST00000583877 POM121CA8CG34 1229 aa9□□□□□ -0.97
NUP85-223ENST00000583877 B8ZZF3 427 aa9□□□□□ -0.97
NUP85-223ENST00000583877 PIK3R2O00459 728 aa9□□□□□ -0.97
NUP85-223ENST00000583877 OPA1O60313 960 aa9□□□□□ -0.97
NUP85-223ENST00000583877 RTN2O75298 545 aa9□□□□□ -0.97
NUP85-223ENST00000583877 FBXO21O94952 628 aa9□□□□□ -0.97
NUP85-223ENST00000583877 F13A1P00488 732 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms