RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 ATXN1LP0C7T5 689 aaKnown RBP8.28□□□□□ -1.08
PPP4R1-225ENST00000583438 PRKCHP24723 683 aa8.28□□□□□ -1.08
PPP4R1-225ENST00000583438 ABCD1P33897 745 aa8.28□□□□□ -1.08
PPP4R1-225ENST00000583438 HOXD12P35452 270 aa8.28□□□□□ -1.08
PPP4R1-225ENST00000583438 MAP3K7CLP57077 242 aa8.28□□□□□ -1.08
PPP4R1-225ENST00000583438 CUL4BQ13620 913 aa8.28□□□□□ -1.08
PPP4R1-225ENST00000583438 ALCAMQ13740 583 aa8.28□□□□□ -1.08
PPP4R1-225ENST00000583438 ENPP2Q13822 863 aa8.28□□□□□ -1.08
PPP4R1-225ENST00000583438 MAPRE1Q15691 268 aaKnown RBP8.28□□□□□ -1.08
PPP4R1-225ENST00000583438 BMT2Q1RMZ1 405 aa8.28□□□□□ -1.08
PPP4R1-225ENST00000583438 SPDYCQ5MJ68 293 aa8.28□□□□□ -1.08
PPP4R1-225ENST00000583438 FAM26FQ5R3K3 315 aa8.28□□□□□ -1.08
PPP4R1-225ENST00000583438 HECTD3Q5T447 861 aa8.28□□□□□ -1.08
PPP4R1-225ENST00000583438 CDCP2Q5VXM1 449 aa8.28□□□□□ -1.08
PPP4R1-225ENST00000583438 CNNM4Q6P4Q7 775 aa8.28□□□□□ -1.08
PPP4R1-225ENST00000583438 CLEC20AQ6ZU45 233 aa8.28□□□□□ -1.08
PPP4R1-225ENST00000583438 ZCCHC9Q8N567 271 aaKnown RBP8.28□□□□□ -1.08
PPP4R1-225ENST00000583438 FAM169BQ8N8A8 192 aa8.28□□□□□ -1.08
PPP4R1-225ENST00000583438 LINC00301Q8NCQ3 95 aa8.28□□□□□ -1.08
PPP4R1-225ENST00000583438 SREK1Q8WXA9 508 aaKnown RBP8.28□□□□□ -1.08
PPP4R1-225ENST00000583438 ADAMTS14Q8WXS8 1223 aa8.28□□□□□ -1.08
PPP4R1-225ENST00000583438 DHX58Q96C10 678 aa8.28□□□□□ -1.08
PPP4R1-225ENST00000583438 ANAPC16Q96DE5 110 aa8.28□□□□□ -1.08
PPP4R1-225ENST00000583438 SLITRK1Q96PX8 696 aa8.28□□□□□ -1.08
PPP4R1-225ENST00000583438 ORAI3Q9BRQ5 295 aa8.28□□□□□ -1.08
PPP4R1-225ENST00000583438 SNX25Q9H3E2 840 aa8.28□□□□□ -1.08
PPP4R1-225ENST00000583438 USP36Q9P275 1121 aaKnown RBP8.28□□□□□ -1.08
PPP4R1-225ENST00000583438 DEC1Q9P2X7 70 aa8.28□□□□□ -1.08
PPP4R1-225ENST00000583438 FBXO10Q9UK96 956 aa8.28□□□□□ -1.08
PPP4R1-225ENST00000583438 A0A1W2PQD8 194 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 A0A1W2PQH9 124 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 FAM149AA5PLN7 773 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 CBX4O00257 560 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 AP5Z1O43299 807 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 OPHN1O60890 802 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 C1QL1O75973 258 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 ALDH1A2O94788 518 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 SLITRK5O94991 958 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 PENKP01210 267 aaPredicted RBP8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 PRB1P04280 392 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 FURINP09958 794 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 NME1P15531 152 aaKnown RBP8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 TNNI1P19237 187 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 ACO1P21399 889 aaKnown RBP8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 ETFBP38117 255 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 PPP3CCP48454 512 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 TUBP50607 506 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 SGSHP51688 502 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 NDST1P52848 882 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 MFAP3P55082 362 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 TNNC1P63316 161 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 ASIC1P78348 528 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 GFPT1Q06210 699 aaPredicted RBP8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 TRIP6Q15654 476 aaKnown RBP8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 PLEKHG6Q3KR16 790 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 FYB2Q5VWT5 728 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 GRAMD4Q6IC98 578 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 KIAA1324Q6UXG2 1013 aaKnown RBP8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 CCDC73Q6ZRK6 1079 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 NLRC3Q7RTR2 1065 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 ZAR1Q86SH2 424 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 CHPFQ8IZ52 775 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 ZNF366Q8N895 744 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 MFSD2AQ8NA29 543 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 WFDC5Q8TCV5 224 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 PARD3BQ8TEW8 1205 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 DNASE2BQ8WZ79 361 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 OVCA2Q8WZ82 227 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 NDRG1Q92597 394 aaKnown RBP8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 OTUB2Q96DC9 234 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 SMARCD1Q96GM5 515 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 TOE1Q96GM8 510 aaKnown RBP8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 PIWIL1Q96J94 861 aaKnown RBP8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 MIPEPQ99797 713 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 C7orf25Q9BPX7 421 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 DUSP23Q9BVJ7 150 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 BBS2Q9BXC9 721 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 TNMDQ9H2S6 317 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 KCTD10Q9H3F6 313 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 SLC39A2Q9NP94 309 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 DMAP1Q9NPF5 467 aaPredicted RBP8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 DMAC2Q9NW81 257 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 WSB2Q9NYS7 404 aaPredicted RBP8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 TBC1D14Q9P2M4 693 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 CCDC39Q9UFE4 941 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 SH3BP1Q9Y3L3 701 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 KIF3AQ9Y496 699 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 STON1Q9Y6Q2 735 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 KNTC1P50748 2209 aa8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 FLNBO75369 2602 aaKnown RBP8.27□□□□□ -1.09
PPP4R1-225ENST00000583438 KIF26BQ2KJY2 2108 aa8.26□□□□□ -1.09
PPP4R1-225ENST00000583438 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.26□□□□□ -1.09
PPP4R1-225ENST00000583438 TULP2O00295 520 aa8.26□□□□□ -1.09
PPP4R1-225ENST00000583438 KCNK3O14649 394 aa8.26□□□□□ -1.09
PPP4R1-225ENST00000583438 RTN3O95197 1032 aaPredicted RBP8.26□□□□□ -1.09
PPP4R1-225ENST00000583438 F13BP05160 661 aa8.26□□□□□ -1.09
PPP4R1-225ENST00000583438 FAM87AP0C7U9 286 aa8.26□□□□□ -1.09
PPP4R1-225ENST00000583438 HLA-EP13747 358 aa8.26□□□□□ -1.09
PPP4R1-225ENST00000583438 FSTP19883 344 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms