RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 PLRG1O43660 514 aaKnown RBP12.69□□□□□ -0.38
TOP3A-215ENST00000583328 STX10O60499 249 aa12.69□□□□□ -0.38
TOP3A-215ENST00000583328 MOCS2O96007 188 aaPredicted RBP12.69□□□□□ -0.38
TOP3A-215ENST00000583328 THEGLP0DJG4 465 aa12.69□□□□□ -0.38
TOP3A-215ENST00000583328 ALPPL2P10696 532 aa12.69□□□□□ -0.38
TOP3A-215ENST00000583328 CKMT1AP12532 417 aa12.69□□□□□ -0.38
TOP3A-215ENST00000583328 VAV1P15498 845 aa12.69□□□□□ -0.38
TOP3A-215ENST00000583328 NUMBP49757 651 aa12.69□□□□□ -0.38
TOP3A-215ENST00000583328 NDUFA8P51970 172 aa12.69□□□□□ -0.38
TOP3A-215ENST00000583328 METAP1P53582 386 aa12.69□□□□□ -0.38
TOP3A-215ENST00000583328 CUL2Q13617 745 aa12.69□□□□□ -0.38
TOP3A-215ENST00000583328 PMF1Q6P1K2 205 aa12.69□□□□□ -0.38
TOP3A-215ENST00000583328 DSG4Q86SJ6 1040 aa12.69□□□□□ -0.38
TOP3A-215ENST00000583328 TRIM69Q86WT6 500 aa12.69□□□□□ -0.38
TOP3A-215ENST00000583328 LGI2Q8N0V4 545 aa12.69□□□□□ -0.38
TOP3A-215ENST00000583328 OR8D1Q8WZ84 308 aa12.69□□□□□ -0.38
TOP3A-215ENST00000583328 EEF2KMTQ96G04 330 aa12.69□□□□□ -0.38
TOP3A-215ENST00000583328 FCRL2Q96LA5 508 aaPredicted RBP12.69□□□□□ -0.38
TOP3A-215ENST00000583328 SERPINB11Q96P15 392 aa12.69□□□□□ -0.38
TOP3A-215ENST00000583328 SPAG5Q96R06 1193 aa12.69□□□□□ -0.38
TOP3A-215ENST00000583328 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.69□□□□□ -0.38
TOP3A-215ENST00000583328 GOLPH3LQ9H4A5 285 aa12.69□□□□□ -0.38
TOP3A-215ENST00000583328 KLHL11Q9NVR0 708 aa12.69□□□□□ -0.38
TOP3A-215ENST00000583328 TJP2Q9UDY2 1190 aa12.69□□□□□ -0.38
TOP3A-215ENST00000583328 KIAA1257Q9ULG3 409 aa12.69□□□□□ -0.38
TOP3A-215ENST00000583328 SPTA1P02549 2419 aa12.68□□□□□ -0.38
TOP3A-215ENST00000583328 RNGTTO60942 597 aaKnown RBP12.68□□□□□ -0.38
TOP3A-215ENST00000583328 GABBR2O75899 941 aa12.68□□□□□ -0.38
TOP3A-215ENST00000583328 MYL1P05976 194 aa12.68□□□□□ -0.38
TOP3A-215ENST00000583328 MYF5P13349 255 aa12.68□□□□□ -0.38
TOP3A-215ENST00000583328 KRT10P13645 584 aa12.68□□□□□ -0.38
TOP3A-215ENST00000583328 ZNF18P17022 549 aa12.68□□□□□ -0.38
TOP3A-215ENST00000583328 RBMS1P29558 406 aaKnown RBP12.68□□□□□ -0.38
TOP3A-215ENST00000583328 DUSP3P51452 185 aaPredicted RBP12.68□□□□□ -0.38
TOP3A-215ENST00000583328 UBE2HP62256 183 aa12.68□□□□□ -0.38
TOP3A-215ENST00000583328 SULT2A1Q06520 285 aa12.68□□□□□ -0.38
TOP3A-215ENST00000583328 KCNMA1Q12791 1236 aa12.68□□□□□ -0.38
TOP3A-215ENST00000583328 ACCSLQ4AC99 568 aa12.68□□□□□ -0.38
TOP3A-215ENST00000583328 CHSY1Q86X52 802 aa12.68□□□□□ -0.38
TOP3A-215ENST00000583328 MAPK15Q8TD08 544 aa12.68□□□□□ -0.38
TOP3A-215ENST00000583328 CLEC4CQ8WTT0 213 aa12.68□□□□□ -0.38
TOP3A-215ENST00000583328 SNRNP27Q8WVK2 155 aaKnown RBP12.68□□□□□ -0.38
TOP3A-215ENST00000583328 FAM131CQ96AQ9 280 aa12.68□□□□□ -0.38
TOP3A-215ENST00000583328 APOLD1Q96LR9 279 aa12.68□□□□□ -0.38
TOP3A-215ENST00000583328 MYOCQ99972 504 aa12.68□□□□□ -0.38
TOP3A-215ENST00000583328 MIS12Q9H081 205 aa12.68□□□□□ -0.38
TOP3A-215ENST00000583328 ASCL3Q9NQ33 180 aa12.68□□□□□ -0.38
TOP3A-215ENST00000583328 EVA1BQ9NVM1 165 aa12.68□□□□□ -0.38
TOP3A-215ENST00000583328 SARDHQ9UL12 918 aa12.68□□□□□ -0.38
TOP3A-215ENST00000583328 TLR6Q9Y2C9 796 aa12.68□□□□□ -0.38
TOP3A-215ENST00000583328 NEMP2A6NFY4 417 aa12.67□□□□□ -0.38
TOP3A-215ENST00000583328 C1QTNF3-AMACRE9PGA6 284 aa12.67□□□□□ -0.38
TOP3A-215ENST00000583328 GOLGA6L22H0YM25 854 aa12.67□□□□□ -0.38
TOP3A-215ENST00000583328 K7ENP7 123 aa12.67□□□□□ -0.38
TOP3A-215ENST00000583328 GADD45BO75293 160 aaPredicted RBP12.67□□□□□ -0.38
TOP3A-215ENST00000583328 PIAS2O75928 621 aa12.67□□□□□ -0.38
TOP3A-215ENST00000583328 FBXO21O94952 628 aa12.67□□□□□ -0.38
TOP3A-215ENST00000583328 GP1BAP07359 652 aa12.67□□□□□ -0.38
TOP3A-215ENST00000583328 EPB41P11171 864 aaKnown RBP12.67□□□□□ -0.38
TOP3A-215ENST00000583328 PDGFRAP16234 1089 aa12.67□□□□□ -0.38
TOP3A-215ENST00000583328 CNTN1Q12860 1018 aa12.67□□□□□ -0.38
TOP3A-215ENST00000583328 SLC12A1Q13621 1099 aa12.67□□□□□ -0.38
TOP3A-215ENST00000583328 C3orf38Q5JPI3 329 aa12.67□□□□□ -0.38
TOP3A-215ENST00000583328 AGBL4Q5VU57 503 aa12.67□□□□□ -0.38
TOP3A-215ENST00000583328 TCERG1LQ5VWI1 586 aa12.67□□□□□ -0.38
TOP3A-215ENST00000583328 KIAA1614Q5VZ46 1190 aa12.67□□□□□ -0.38
TOP3A-215ENST00000583328 RAP1GAP2Q684P5 730 aa12.67□□□□□ -0.38
TOP3A-215ENST00000583328 INO80CQ6PI98 192 aaPredicted RBP12.67□□□□□ -0.38
TOP3A-215ENST00000583328 LCLAT1Q6UWP7 414 aa12.67□□□□□ -0.38
TOP3A-215ENST00000583328 PRICKLE2Q7Z3G6 844 aa12.67□□□□□ -0.38
TOP3A-215ENST00000583328 FMR1NBQ8N0W7 255 aaPredicted RBP12.67□□□□□ -0.38
TOP3A-215ENST00000583328 DQX1Q8TE96 717 aaKnown RBP12.67□□□□□ -0.38
TOP3A-215ENST00000583328 FRS2Q8WU20 508 aa12.67□□□□□ -0.38
TOP3A-215ENST00000583328 SLC35F5Q8WV83 523 aa12.67□□□□□ -0.38
TOP3A-215ENST00000583328 KLK6Q92876 244 aa12.67□□□□□ -0.38
TOP3A-215ENST00000583328 CCDC97Q96F63 343 aaPredicted RBP12.67□□□□□ -0.38
TOP3A-215ENST00000583328 HSFY1Q96LI6 401 aa12.67□□□□□ -0.38
TOP3A-215ENST00000583328 CALN1Q9BXU9 219 aa12.67□□□□□ -0.38
TOP3A-215ENST00000583328 PREBQ9HCU5 417 aa12.67□□□□□ -0.38
TOP3A-215ENST00000583328 NLGN3Q9NZ94 848 aa12.67□□□□□ -0.38
TOP3A-215ENST00000583328 XPO7Q9UIA9 1087 aaKnown RBP12.67□□□□□ -0.38
TOP3A-215ENST00000583328 HEMK1Q9Y5R4 338 aaPredicted RBP12.67□□□□□ -0.38
TOP3A-215ENST00000583328 MGAQ8IWI9 3026 aa12.67□□□□□ -0.38
TOP3A-215ENST00000583328 MYO18BQ8IUG5 2567 aa12.67□□□□□ -0.38
TOP3A-215ENST00000583328 TENM4Q6N022 2769 aa12.66□□□□□ -0.38
TOP3A-215ENST00000583328 M0QYV0 167 aa12.66□□□□□ -0.38
TOP3A-215ENST00000583328 BNIP3LO60238 219 aa12.66□□□□□ -0.38
TOP3A-215ENST00000583328 RHOBTB3O94955 611 aa12.66□□□□□ -0.38
TOP3A-215ENST00000583328 ZNF202O95125 648 aa12.66□□□□□ -0.38
TOP3A-215ENST00000583328 APOEP02649 317 aa12.66□□□□□ -0.38
TOP3A-215ENST00000583328 GIMD1P0DJR0 217 aa12.66□□□□□ -0.38
TOP3A-215ENST00000583328 PRLRP16471 622 aa12.66□□□□□ -0.38
TOP3A-215ENST00000583328 TACR2P21452 398 aa12.66□□□□□ -0.38
TOP3A-215ENST00000583328 AKT2P31751 481 aa12.66□□□□□ -0.38
TOP3A-215ENST00000583328 CSRP3P50461 194 aa12.66□□□□□ -0.38
TOP3A-215ENST00000583328 MCCD1P59942 119 aaPredicted RBP12.66□□□□□ -0.38
TOP3A-215ENST00000583328 LRMPQ12912 555 aa12.66□□□□□ -0.38
TOP3A-215ENST00000583328 NNTQ13423 1086 aa12.66□□□□□ -0.38
TOP3A-215ENST00000583328 CNGA2Q16280 664 aa12.66□□□□□ -0.38
TOP3A-215ENST00000583328 ISXQ2M1V0 245 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms