RNA–Protein interactions for RNA: ENST00000583289.5

PTPRM-215, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-215ENST00000583289 ZNF610Q8N9Z0 462 aa4.79□□□□□ -1.64
PTPRM-215ENST00000583289 FBXL13Q8NEE6 735 aa4.79□□□□□ -1.64
PTPRM-215ENST00000583289 OR52N2Q8NGI0 321 aa4.79□□□□□ -1.64
PTPRM-215ENST00000583289 LMO3Q8TAP4 145 aa4.79□□□□□ -1.64
PTPRM-215ENST00000583289 CPT1CQ8TCG5 803 aa4.79□□□□□ -1.64
PTPRM-215ENST00000583289 CCHCR1Q8TD31 782 aa4.79□□□□□ -1.64
PTPRM-215ENST00000583289 GRK7Q8WTQ7 553 aa4.79□□□□□ -1.64
PTPRM-215ENST00000583289 GAB3Q8WWW8 586 aa4.79□□□□□ -1.64
PTPRM-215ENST00000583289 RSAD2Q8WXG1 361 aa4.79□□□□□ -1.64
PTPRM-215ENST00000583289 P3H4Q92791 437 aa4.79□□□□□ -1.64
PTPRM-215ENST00000583289 RNPC3Q96LT9 517 aaKnown RBP4.79□□□□□ -1.64
PTPRM-215ENST00000583289 ERP44Q9BS26 406 aa4.79□□□□□ -1.64
PTPRM-215ENST00000583289 SYT11Q9BT88 431 aa4.79□□□□□ -1.64
PTPRM-215ENST00000583289 TEX13BQ9BXU2 312 aa4.79□□□□□ -1.64
PTPRM-215ENST00000583289 FGFBP2Q9BYJ0 223 aa4.79□□□□□ -1.64
PTPRM-215ENST00000583289 TMEM39BQ9GZU3 492 aa4.79□□□□□ -1.64
PTPRM-215ENST00000583289 PIF1Q9H611 641 aa4.79□□□□□ -1.64
PTPRM-215ENST00000583289 CNOT10Q9H9A5 744 aaKnown RBP4.79□□□□□ -1.64
PTPRM-215ENST00000583289 MRPL47Q9HD33 250 aaKnown RBP4.79□□□□□ -1.64
PTPRM-215ENST00000583289 PXMP2Q9NR77 195 aa4.79□□□□□ -1.64
PTPRM-215ENST00000583289 ZNF277Q9NRM2 450 aaPredicted RBP4.79□□□□□ -1.64
PTPRM-215ENST00000583289 CTTNBP2NLQ9P2B4 639 aa4.79□□□□□ -1.64
PTPRM-215ENST00000583289 GTF3C4Q9UKN8 822 aa4.79□□□□□ -1.64
PTPRM-215ENST00000583289 ZHX1Q9UKY1 873 aaPredicted RBP4.79□□□□□ -1.64
PTPRM-215ENST00000583289 NFU1Q9UMS0 254 aa4.79□□□□□ -1.64
PTPRM-215ENST00000583289 ADAMTS5Q9UNA0 930 aa4.79□□□□□ -1.64
PTPRM-215ENST00000583289 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.79□□□□□ -1.64
PTPRM-215ENST00000583289 TFR2Q9UP52 801 aa4.79□□□□□ -1.64
PTPRM-215ENST00000583289 PCDHB2Q9Y5E7 798 aa4.79□□□□□ -1.64
PTPRM-215ENST00000583289 PCDHAC2Q9Y5I4 1007 aa4.79□□□□□ -1.64
PTPRM-215ENST00000583289 ALG6Q9Y672 507 aa4.79□□□□□ -1.64
PTPRM-215ENST00000583289 ZNF646O15015 1829 aaPredicted RBP4.79□□□□□ -1.64
PTPRM-215ENST00000583289 K7ERI5 159 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 AGPSO00116 658 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 NCK2O43639 380 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 EXTL3O43909 919 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 SCAF4O95104 1147 aaKnown RBP4.78□□□□□ -1.64
PTPRM-215ENST00000583289 FGGP02679 453 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 CYP1A2P05177 515 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 MYCLP12524 364 aaPredicted RBP4.78□□□□□ -1.64
PTPRM-215ENST00000583289 DPEP1P16444 411 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 CTNNA2P26232 953 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 ATP5DP30049 168 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 ICAM3P32942 547 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 FNTAP49354 379 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 CARSP49589 748 aaKnown RBP4.78□□□□□ -1.64
PTPRM-215ENST00000583289 GZMKP49863 264 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 PDE6CP51160 858 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 SCNN1BP51168 640 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 PEX3P56589 373 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 RWDD2BP57060 319 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 YWHAEP62258 255 aaKnown RBP4.78□□□□□ -1.64
PTPRM-215ENST00000583289 MRPS9P82933 396 aaKnown RBP4.78□□□□□ -1.64
PTPRM-215ENST00000583289 DR1Q01658 176 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 POU5F1Q01860 360 aaKnown RBP4.78□□□□□ -1.64
PTPRM-215ENST00000583289 TAP1Q03518 808 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 COL10A1Q03692 680 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 IFFO1Q0D2I5 559 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 PTP4A2Q12974 167 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 GRM1Q13255 1194 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 ITGB3BPQ13352 177 aaPredicted RBP4.78□□□□□ -1.64
PTPRM-215ENST00000583289 PRPF4BQ13523 1007 aaKnown RBP4.78□□□□□ -1.64
PTPRM-215ENST00000583289 BYSLQ13895 437 aaKnown RBP4.78□□□□□ -1.64
PTPRM-215ENST00000583289 NEDD9Q14511 834 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 STXBP2Q15833 593 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 TIGD2Q4W5G0 525 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 ODF2Q5BJF6 829 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 KIAA1755Q5JYT7 1200 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 FAM102BQ5T8I3 360 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 FAM160B1Q5W0V3 765 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 ACAD10Q6JQN1 1059 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 TAS1R1Q7RTX1 841 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 C11orf74Q86VG3 221 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 GLB1L2Q8IW92 636 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 KLHL7Q8IXQ5 586 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 CNPY4Q8N129 248 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 DAW1Q8N136 415 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 GPD1LQ8N335 351 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 SMC1BQ8NDV3 1235 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 TMEM161BQ8NDZ6 487 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 PARD3BQ8TEW8 1205 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 HDAC7Q8WUI4 952 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 TCP11Q8WWU5 503 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 PPM1EQ8WY54 764 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 POMGNT1Q8WZA1 660 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 SHC3Q92529 594 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 SLCO2A1Q92959 643 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 CENPTQ96BT3 561 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 MS4A14Q96JA4 679 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 FAM167AQ96KS9 214 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 CEP170P1Q96L14 293 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 ATP6V1G3Q96LB4 118 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 TAAR1Q96RJ0 339 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 FNBP1Q96RU3 617 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 PSMB7Q99436 277 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 CCDC77Q9BR77 488 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 TMEM109Q9BVC6 243 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 SLC46A2Q9BY10 475 aa4.78□□□□□ -1.64
PTPRM-215ENST00000583289 ROPN1BQ9BZX4 212 aaPredicted RBP4.78□□□□□ -1.64
PTPRM-215ENST00000583289 ZNF518BQ9C0D4 1074 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms