RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	LVRN	Q6Q4G3	990 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	PRSS57	Q6UWY2	283 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	DSTYK	Q6XUX3	929 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	MIER3	Q7Z3K6	550 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	KDELC2	Q7Z4H8	507 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	AADAT	Q8N5Z0	425 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	OR14C36	Q8NHC7	312 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	LMX1A	Q8TE12	382 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	GRHL3	Q8TE85	626 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	BTN2A2	Q8WVV5	523 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	PIBF1	Q8WXW3	757 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	SHC3	Q92529	594 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	SENP8	Q96LD8	212 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	IPO9	Q96P70	1041 aa	Known RBP	5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	OMD	Q99983	421 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	UBAC1	Q9BSL1	405 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	CCDC94	Q9BW85	323 aa	Predicted RBP	5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	TEKT3	Q9BXF9	490 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	CALN1	Q9BXU9	219 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	BEX4	Q9NWD9	120 aa	Predicted RBP	5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	SLC39A1	Q9NY26	324 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	GPR83	Q9NYM4	423 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	KLF15	Q9UIH9	416 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	KIAA1024	Q9UPX6	916 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	CA5B	Q9Y2D0	317 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	USP20	Q9Y2K6	914 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	TBC1D3D	A0A087WVF3	549 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	TBC1D3I	A0A087WXS9	549 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	TBC1D3E	A0A087X179	549 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	TBC1D3K	A0A087X1G2	549 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	IGHV5-10-1	A0A0J9YXX1	117 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	TBC1D3F	A6NER0	549 aa	Predicted RBP	5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	TBC1D3L	B9A6J9	549 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	ARHGEF9	O43307	516 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	PLRG1	O43660	514 aa	Known RBP	5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	JRK	O75564	520 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	GCAT	O75600	419 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	CT47B1	P0C2W7	299 aa	Predicted RBP	5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	TBC1D3H	P0C7X1	549 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	VSIG8	P0DPA2	414 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	BMP7	P18075	431 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	MSX1	P28360	303 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	MAGEA11	P43364	429 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	TSFM	P43897	325 aa	Known RBP	5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	LILRA4	P59901	499 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	NOP14	P78316	857 aa	Known RBP	5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	CHAF1B	Q13112	559 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	KCNAB1	Q14722	419 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	FAM174B	Q3ZCQ3	159 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	PRR16	Q569H4	304 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	ZNF542P	Q5EBM4	170 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	LRCH2	Q5VUJ6	765 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	FYB2	Q5VWT5	728 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	LYPLAL1	Q5VWZ2	237 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	ANKS6	Q68DC2	871 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	ZNF324B	Q6AW86	544 aa	Predicted RBP	5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	TBC1D3G	Q6DHY5	549 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	TBC1D3C	Q6IPX1	549 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	CEACAM20	Q6UY09	585 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	GCNT7	Q6ZNI0	430 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	CAPN12	Q6ZSI9	719 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	TPGS1	Q6ZTW0	290 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	TBC1D3	Q8IZP1	549 aa	Predicted RBP	5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	CEP120	Q8N960	986 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	KY	Q8NBH2	561 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	GANC	Q8TET4	914 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	SORCS1	Q8WY21	1168 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	GTF3C6	Q969F1	213 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	FAM212A	Q96EL1	285 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	PKMYT1	Q99640	499 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	FEM1A	Q9BSK4	669 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	POLDIP3	Q9BY77	421 aa	Known RBP	5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	SLC2A11	Q9BYW1	496 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	CCSER1	Q9C0I3	900 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	C2orf40	Q9H1Z8	148 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	ZNF696	Q9H7X3	374 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	SPAST	Q9UBP0	616 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	TNN	Q9UQP3	1299 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	CYP46A1	Q9Y6A2	500 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	PCM1	Q15154	2024 aa		5.16	□□□□□ -1.58
MSI2-216	ENST00000582772	NOTCH3	Q9UM47	2321 aa		5.15	□□□□□ -1.58
MSI2-216	ENST00000582772	TRGV8	A0A0C4DH27	118 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	PIPSL	A2A3N6	862 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772		A6NNZ2	444 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	COCH	O43405	550 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	RNASEH1	O60930	286 aa	Known RBP	5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	RAB11FIP3	O75154	756 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	IGHD	P01880	384 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	ERBB2	P04626	1255 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	GLB1	P16278	677 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	JUND	P17535	347 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	C5AR1	P21730	350 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	CYP2F1	P24903	491 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	MAT2A	P31153	395 aa	Known RBP	5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	DRD3	P35462	400 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	ANP32A	P39687	249 aa	Known RBP	5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	GLRB	P48167	497 aa		5.15	□□□□□ -1.59
MSI2-216	ENST00000582772	USP46	P62068	366 aa		5.15	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms