RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 ALG14Q96F25 216 aa10.93□□□□□ -0.66
RFFL-209ENST00000581265 SERAC1Q96JX3 654 aa10.93□□□□□ -0.66
RFFL-209ENST00000581265 FAM81BQ96LP2 452 aa10.93□□□□□ -0.66
RFFL-209ENST00000581265 FCRL3Q96P31 734 aaPredicted RBP10.93□□□□□ -0.66
RFFL-209ENST00000581265 SPAG5Q96R06 1193 aa10.93□□□□□ -0.66
RFFL-209ENST00000581265 ERVMER34-1Q9H9K5 563 aa10.93□□□□□ -0.66
RFFL-209ENST00000581265 ACP6Q9NPH0 428 aa10.93□□□□□ -0.66
RFFL-209ENST00000581265 GDF3Q9NR23 364 aa10.93□□□□□ -0.66
RFFL-209ENST00000581265 AASDHPPTQ9NRN7 309 aa10.93□□□□□ -0.66
RFFL-209ENST00000581265 ARID1BQ8NFD5 2236 aaPredicted RBP10.93□□□□□ -0.66
RFFL-209ENST00000581265 TBC1D3DA0A087WVF3 549 aa10.92□□□□□ -0.66
RFFL-209ENST00000581265 TBC1D3IA0A087WXS9 549 aa10.92□□□□□ -0.66
RFFL-209ENST00000581265 TBC1D3EA0A087X179 549 aa10.92□□□□□ -0.66
RFFL-209ENST00000581265 TBC1D3KA0A087X1G2 549 aa10.92□□□□□ -0.66
RFFL-209ENST00000581265 A0A1B0GVM2 712 aa10.92□□□□□ -0.66
RFFL-209ENST00000581265 TBC1D3FA6NER0 549 aaPredicted RBP10.92□□□□□ -0.66
RFFL-209ENST00000581265 TCAF2A6NFQ2 919 aa10.92□□□□□ -0.66
RFFL-209ENST00000581265 TBC1D3LB9A6J9 549 aa10.92□□□□□ -0.66
RFFL-209ENST00000581265 ENC1O14682 589 aa10.92□□□□□ -0.66
RFFL-209ENST00000581265 RRP8O43159 456 aaKnown RBP10.92□□□□□ -0.66
RFFL-209ENST00000581265 SLC7A4O43246 635 aa10.92□□□□□ -0.66
RFFL-209ENST00000581265 THAP12O43422 761 aa10.92□□□□□ -0.66
RFFL-209ENST00000581265 FGFR1OPO95684 399 aaKnown RBP10.92□□□□□ -0.66
RFFL-209ENST00000581265 LDOC1O95751 146 aaPredicted RBP10.92□□□□□ -0.66
RFFL-209ENST00000581265 ITGAVP06756 1048 aa10.92□□□□□ -0.66
RFFL-209ENST00000581265 TBC1D3HP0C7X1 549 aa10.92□□□□□ -0.66
RFFL-209ENST00000581265 PDGFRAP16234 1089 aa10.92□□□□□ -0.66
RFFL-209ENST00000581265 ABCB4P21439 1286 aa10.92□□□□□ -0.66
RFFL-209ENST00000581265 GNA15P30679 374 aa10.92□□□□□ -0.66
RFFL-209ENST00000581265 CCR1P32246 355 aa10.92□□□□□ -0.66
RFFL-209ENST00000581265 DRD3P35462 400 aa10.92□□□□□ -0.66
RFFL-209ENST00000581265 NUDT1P36639 197 aa10.92□□□□□ -0.66
RFFL-209ENST00000581265 ARRB1P49407 418 aaPredicted RBP10.92□□□□□ -0.66
RFFL-209ENST00000581265 STX17P56962 302 aa10.92□□□□□ -0.66
RFFL-209ENST00000581265 NXPH1P58417 271 aa10.92□□□□□ -0.66
RFFL-209ENST00000581265 KCNC4Q03721 635 aa10.92□□□□□ -0.66
RFFL-209ENST00000581265 PAK1Q13153 545 aa10.92□□□□□ -0.66
RFFL-209ENST00000581265 SLC45A4Q5BKX6 768 aa10.92□□□□□ -0.66
RFFL-209ENST00000581265 EFHC1Q5JVL4 640 aa10.92□□□□□ -0.66
RFFL-209ENST00000581265 RABGAP1LQ5R372 815 aa10.92□□□□□ -0.66
RFFL-209ENST00000581265 TBC1D3GQ6DHY5 549 aa10.92□□□□□ -0.66
RFFL-209ENST00000581265 TBC1D3CQ6IPX1 549 aa10.92□□□□□ -0.66
RFFL-209ENST00000581265 CXorf57Q6NSI4 855 aaKnown RBP10.92□□□□□ -0.66
RFFL-209ENST00000581265 FBXL22Q6P050 247 aa10.92□□□□□ -0.66
RFFL-209ENST00000581265 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.92□□□□□ -0.66
RFFL-209ENST00000581265 DSG4Q86SJ6 1040 aa10.92□□□□□ -0.66
RFFL-209ENST00000581265 IQCHQ86VS3 1027 aa10.92□□□□□ -0.66
RFFL-209ENST00000581265 TBC1D3Q8IZP1 549 aaPredicted RBP10.92□□□□□ -0.66
RFFL-209ENST00000581265 TSC1Q92574 1164 aa10.92□□□□□ -0.66
RFFL-209ENST00000581265 SLC2A13Q96QE2 648 aa10.92□□□□□ -0.66
RFFL-209ENST00000581265 FEM1AQ9BSK4 669 aa10.92□□□□□ -0.66
RFFL-209ENST00000581265 ASNSD1Q9NWL6 643 aa10.92□□□□□ -0.66
RFFL-209ENST00000581265 ARHGAP20Q9P2F6 1191 aa10.92□□□□□ -0.66
RFFL-209ENST00000581265 PPM1HQ9ULR3 514 aa10.92□□□□□ -0.66
RFFL-209ENST00000581265 CTNND2Q9UQB3 1225 aa10.92□□□□□ -0.66
RFFL-209ENST00000581265 COL5A1P20908 1838 aaPredicted RBP10.91□□□□□ -0.66
RFFL-209ENST00000581265 BECN2A8MW95 431 aa10.91□□□□□ -0.66
RFFL-209ENST00000581265 BIN1O00499 593 aa10.91□□□□□ -0.66
RFFL-209ENST00000581265 MCF2LO15068 1137 aa10.91□□□□□ -0.66
RFFL-209ENST00000581265 ATP9BO43861 1147 aa10.91□□□□□ -0.66
RFFL-209ENST00000581265 JUPP14923 745 aa10.91□□□□□ -0.66
RFFL-209ENST00000581265 VAV1P15498 845 aa10.91□□□□□ -0.66
RFFL-209ENST00000581265 ITPKBP27987 946 aa10.91□□□□□ -0.66
RFFL-209ENST00000581265 EPHA8P29322 1005 aaPredicted RBP10.91□□□□□ -0.66
RFFL-209ENST00000581265 OVGP1Q12889 678 aa10.91□□□□□ -0.66
RFFL-209ENST00000581265 AUHQ13825 339 aaKnown RBP10.91□□□□□ -0.66
RFFL-209ENST00000581265 TAF1BQ53T94 588 aaPredicted RBP10.91□□□□□ -0.66
RFFL-209ENST00000581265 SFMBT2Q5VUG0 894 aa10.91□□□□□ -0.66
RFFL-209ENST00000581265 FAM46CQ5VWP2 391 aa10.91□□□□□ -0.66
RFFL-209ENST00000581265 NAPEPLDQ6IQ20 393 aa10.91□□□□□ -0.66
RFFL-209ENST00000581265 TRIM65Q6PJ69 517 aa10.91□□□□□ -0.66
RFFL-209ENST00000581265 PRPF39Q86UA1 669 aaKnown RBP10.91□□□□□ -0.66
RFFL-209ENST00000581265 CIR1Q86X95 450 aaPredicted RBP10.91□□□□□ -0.66
RFFL-209ENST00000581265 DEFB106AQ8N104 65 aa10.91□□□□□ -0.66
RFFL-209ENST00000581265 OXR1Q8N573 874 aa10.91□□□□□ -0.66
RFFL-209ENST00000581265 EID2Q8N6I1 236 aa10.91□□□□□ -0.66
RFFL-209ENST00000581265 OR8D1Q8WZ84 308 aa10.91□□□□□ -0.66
RFFL-209ENST00000581265 CNDP2Q96KP4 475 aaKnown RBP10.91□□□□□ -0.66
RFFL-209ENST00000581265 PPP1R13BQ96KQ4 1090 aa10.91□□□□□ -0.66
RFFL-209ENST00000581265 CPXM1Q96SM3 734 aa10.91□□□□□ -0.66
RFFL-209ENST00000581265 CRACR2AQ9BSW2 395 aa10.91□□□□□ -0.66
RFFL-209ENST00000581265 PRORYQ9H606 182 aa10.91□□□□□ -0.66
RFFL-209ENST00000581265 FAM204AQ9H8W3 233 aa10.91□□□□□ -0.66
RFFL-209ENST00000581265 DDIT4Q9NX09 232 aa10.91□□□□□ -0.66
RFFL-209ENST00000581265 SARDHQ9UL12 918 aa10.91□□□□□ -0.66
RFFL-209ENST00000581265 PCDHGC3Q9UN70 934 aa10.91□□□□□ -0.66
RFFL-209ENST00000581265 DMTF1Q9Y222 760 aa10.91□□□□□ -0.66
RFFL-209ENST00000581265 TBC1D30Q9Y2I9 924 aa10.91□□□□□ -0.66
RFFL-209ENST00000581265 OR51B4Q9Y5P0 310 aa10.91□□□□□ -0.66
RFFL-209ENST00000581265 PLXNA2O75051 1894 aa10.91□□□□□ -0.66
RFFL-209ENST00000581265 CELSR3Q9NYQ7 3312 aa10.91□□□□□ -0.66
RFFL-209ENST00000581265 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.9□□□□□ -0.66
RFFL-209ENST00000581265 CBX4O00257 560 aa10.9□□□□□ -0.66
RFFL-209ENST00000581265 ALOX15BO15296 676 aa10.9□□□□□ -0.66
RFFL-209ENST00000581265 PLRG1O43660 514 aaKnown RBP10.9□□□□□ -0.66
RFFL-209ENST00000581265 MAGEC1O60732 1142 aa10.9□□□□□ -0.66
RFFL-209ENST00000581265 HSF2BPO75031 334 aa10.9□□□□□ -0.66
RFFL-209ENST00000581265 RTN2O75298 545 aa10.9□□□□□ -0.66
RFFL-209ENST00000581265 RFPL3O75679 317 aa10.9□□□□□ -0.66
RFFL-209ENST00000581265 SLC9A1P19634 815 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms