RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 ANKS1BQ7Z6G8 1248 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 CCDC50Q8IVM0 306 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 RASGEF1CQ8N431 466 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 PQLC3Q8N755 202 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 PLD5Q8N7P1 536 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 DCAF4L2Q8NA75 395 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 KDM1BQ8NB78 822 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.67□□□□□ -0.7
CCDC47-203ENST00000580986 MAIP1Q8WWC4 291 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 ALG14Q96F25 216 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 WDR24Q96S15 920 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 PNKPQ96T60 521 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 UHRF1Q96T88 793 aaPredicted RBP10.67□□□□□ -0.7
CCDC47-203ENST00000580986 NELL2Q99435 816 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 MAK16Q9BXY0 300 aaKnown RBP10.67□□□□□ -0.7
CCDC47-203ENST00000580986 FRMD8P1Q9BZ68 369 aaPredicted RBP10.67□□□□□ -0.7
CCDC47-203ENST00000580986 OSBPL6Q9BZF3 934 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 BRD8Q9H0E9 1235 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 CD320Q9NPF0 282 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 ARHGEF3Q9NR81 526 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 HEBP1Q9NRV9 189 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 DNAJC17Q9NVM6 304 aaKnown RBP10.67□□□□□ -0.7
CCDC47-203ENST00000580986 KLHL11Q9NVR0 708 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 RNF14Q9UBS8 474 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 GGA2Q9UJY4 613 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 STARD13Q9Y3M8 1113 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 OR51B4Q9Y5P0 310 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 PIAS3Q9Y6X2 628 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 MYOFQ9NZM1 2061 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 ZSCAN5CA6NGD5 496 aaPredicted RBP10.66□□□□□ -0.7
CCDC47-203ENST00000580986 SHISA7A6NL88 538 aa10.66□□□□□ -0.7
CCDC47-203ENST00000580986 PI4K2BG5E9Z4 385 aa10.66□□□□□ -0.7
CCDC47-203ENST00000580986 APOC4-APOC2K7ER74 178 aa10.66□□□□□ -0.7
CCDC47-203ENST00000580986 APOL1O14791 398 aa10.66□□□□□ -0.7
CCDC47-203ENST00000580986 ZNF500O60304 480 aaPredicted RBP10.66□□□□□ -0.7
CCDC47-203ENST00000580986 APOC2P02655 101 aa10.66□□□□□ -0.7
CCDC47-203ENST00000580986 ASLP04424 464 aa10.66□□□□□ -0.7
CCDC47-203ENST00000580986 ATP1A1P05023 1023 aaKnown RBP10.66□□□□□ -0.7
CCDC47-203ENST00000580986 RHOCP08134 193 aa10.66□□□□□ -0.7
CCDC47-203ENST00000580986 PABPC1P11940 636 aaKnown RBP10.66□□□□□ -0.7
CCDC47-203ENST00000580986 TNNT1P13805 278 aa10.66□□□□□ -0.7
CCDC47-203ENST00000580986 MX2P20592 715 aa10.66□□□□□ -0.7
CCDC47-203ENST00000580986 AMPD1P23109 780 aa10.66□□□□□ -0.7
CCDC47-203ENST00000580986 TNFRSF4P43489 277 aa10.66□□□□□ -0.7
CCDC47-203ENST00000580986 GEMIN4P57678 1058 aaKnown RBP10.66□□□□□ -0.7
CCDC47-203ENST00000580986 ZXDAP98168 799 aa10.66□□□□□ -0.7
CCDC47-203ENST00000580986 GNA12Q03113 381 aa10.66□□□□□ -0.7
CCDC47-203ENST00000580986 LMAN2Q12907 356 aa10.66□□□□□ -0.7
CCDC47-203ENST00000580986 POLD3Q15054 466 aaPredicted RBP10.66□□□□□ -0.7
CCDC47-203ENST00000580986 PLEKHG6Q3KR16 790 aa10.66□□□□□ -0.7
CCDC47-203ENST00000580986 FSCBQ5H9T9 825 aa10.66□□□□□ -0.7
CCDC47-203ENST00000580986 GRAMD4Q6IC98 578 aa10.66□□□□□ -0.7
CCDC47-203ENST00000580986 TFAP2DQ7Z6R9 452 aa10.66□□□□□ -0.7
CCDC47-203ENST00000580986 METTL3Q86U44 580 aaKnown RBP10.66□□□□□ -0.7
CCDC47-203ENST00000580986 C12orf40Q86WS4 652 aa10.66□□□□□ -0.7
CCDC47-203ENST00000580986 CIR1Q86X95 450 aaPredicted RBP10.66□□□□□ -0.7
CCDC47-203ENST00000580986 ARHGAP12Q8IWW6 846 aa10.66□□□□□ -0.7
CCDC47-203ENST00000580986 C17orf53Q8N3J3 647 aaPredicted RBP10.66□□□□□ -0.7
CCDC47-203ENST00000580986 CARNMT1Q8N4J0 409 aa10.66□□□□□ -0.7
CCDC47-203ENST00000580986 TTC13Q8NBP0 860 aa10.66□□□□□ -0.7
CCDC47-203ENST00000580986 ST13P5Q8NFI4 369 aaPredicted RBP10.66□□□□□ -0.7
CCDC47-203ENST00000580986 WFDC5Q8TCV5 224 aa10.66□□□□□ -0.7
CCDC47-203ENST00000580986 ARHGEF2Q92974 986 aaKnown RBP10.66□□□□□ -0.7
CCDC47-203ENST00000580986 TTC17Q96AE7 1141 aa10.66□□□□□ -0.7
CCDC47-203ENST00000580986 OLFM3Q96PB7 478 aa10.66□□□□□ -0.7
CCDC47-203ENST00000580986 OSBPL9Q96SU4 736 aa10.66□□□□□ -0.7
CCDC47-203ENST00000580986 NAP1L3Q99457 506 aaPredicted RBP10.66□□□□□ -0.7
CCDC47-203ENST00000580986 P2RY13Q9BPV8 354 aa10.66□□□□□ -0.7
CCDC47-203ENST00000580986 FEM1AQ9BSK4 669 aa10.66□□□□□ -0.7
CCDC47-203ENST00000580986 C2orf49Q9BVC5 232 aaPredicted RBP10.66□□□□□ -0.7
CCDC47-203ENST00000580986 ACE2Q9BYF1 805 aaPredicted RBP10.66□□□□□ -0.7
CCDC47-203ENST00000580986 NOL6Q9H6R4 1146 aaKnown RBP10.66□□□□□ -0.7
CCDC47-203ENST00000580986 ABCB8Q9NUT2 735 aa10.66□□□□□ -0.7
CCDC47-203ENST00000580986 PLK2Q9NYY3 685 aa10.66□□□□□ -0.7
CCDC47-203ENST00000580986 MRPS17Q9Y2R5 130 aaKnown RBP10.66□□□□□ -0.7
CCDC47-203ENST00000580986 MUC22E2RYF6 1773 aaPredicted RBP10.66□□□□□ -0.7
CCDC47-203ENST00000580986 MIA3Q5JRA6 1907 aa10.66□□□□□ -0.7
CCDC47-203ENST00000580986 ARHGAP42A6NI28 874 aa10.65□□□□□ -0.7
CCDC47-203ENST00000580986 ENC1O14682 589 aa10.65□□□□□ -0.7
CCDC47-203ENST00000580986 FANCGO15287 622 aa10.65□□□□□ -0.7
CCDC47-203ENST00000580986 DCXO43602 365 aa10.65□□□□□ -0.7
CCDC47-203ENST00000580986 CST8O60676 142 aa10.65□□□□□ -0.7
CCDC47-203ENST00000580986 KAT7O95251 611 aa10.65□□□□□ -0.7
CCDC47-203ENST00000580986 APODP05090 189 aa10.65□□□□□ -0.7
CCDC47-203ENST00000580986 SLC20A2Q08357 652 aa10.65□□□□□ -0.7
CCDC47-203ENST00000580986 SIGLEC14Q08ET2 396 aa10.65□□□□□ -0.7
CCDC47-203ENST00000580986 GALNT2Q10471 571 aa10.65□□□□□ -0.7
CCDC47-203ENST00000580986 XRCC4Q13426 336 aa10.65□□□□□ -0.7
CCDC47-203ENST00000580986 SERINC3Q13530 473 aa10.65□□□□□ -0.7
CCDC47-203ENST00000580986 TUBB2AQ13885 445 aa10.65□□□□□ -0.7
CCDC47-203ENST00000580986 HSF5Q4G112 596 aaPredicted RBP10.65□□□□□ -0.7
CCDC47-203ENST00000580986 PITRM1Q5JRX3 1037 aa10.65□□□□□ -0.7
CCDC47-203ENST00000580986 TMCO4Q5TGY1 634 aa10.65□□□□□ -0.7
CCDC47-203ENST00000580986 ZNF852Q6ZMS4 543 aa10.65□□□□□ -0.7
CCDC47-203ENST00000580986 TPRG1Q6ZUI0 275 aa10.65□□□□□ -0.7
CCDC47-203ENST00000580986 ADIPOR2Q86V24 386 aa10.65□□□□□ -0.7
CCDC47-203ENST00000580986 SLC13A5Q86YT5 568 aaPredicted RBP10.65□□□□□ -0.7
CCDC47-203ENST00000580986 SYNPOQ8N3V7 929 aa10.65□□□□□ -0.7
CCDC47-203ENST00000580986 NPWQ8N729 165 aa10.65□□□□□ -0.7
CCDC47-203ENST00000580986 OR52K2Q8NGK3 314 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms