RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 ZNF212Q9UDV6 495 aa15.93■□□□□ 0.14
SS18-216ENST00000580751 STARD13Q9Y3M8 1113 aa15.93■□□□□ 0.14
SS18-216ENST00000580751 PRRT4C9JH25 899 aa15.92■□□□□ 0.14
SS18-216ENST00000580751 DAPK3O43293 454 aa15.92■□□□□ 0.14
SS18-216ENST00000580751 RNF40O75150 1001 aa15.92■□□□□ 0.14
SS18-216ENST00000580751 GOT1P17174 413 aa15.92■□□□□ 0.14
SS18-216ENST00000580751 ETFBP38117 255 aa15.92■□□□□ 0.14
SS18-216ENST00000580751 CDH6P55285 790 aa15.92■□□□□ 0.14
SS18-216ENST00000580751 MRPS21P82921 87 aaKnown RBP15.92■□□□□ 0.14
SS18-216ENST00000580751 FZD5Q13467 585 aa15.92■□□□□ 0.14
SS18-216ENST00000580751 PDK2Q15119 407 aa15.92■□□□□ 0.14
SS18-216ENST00000580751 PLEKHG6Q3KR16 790 aa15.92■□□□□ 0.14
SS18-216ENST00000580751 ODF2Q5BJF6 829 aa15.92■□□□□ 0.14
SS18-216ENST00000580751 ZNF572Q7Z3I7 529 aaPredicted RBP15.92■□□□□ 0.14
SS18-216ENST00000580751 TRMT11Q7Z4G4 463 aaKnown RBP15.92■□□□□ 0.14
SS18-216ENST00000580751 NLRP14Q86W24 1093 aa15.92■□□□□ 0.14
SS18-216ENST00000580751 CREG2Q8IUH2 290 aa15.92■□□□□ 0.14
SS18-216ENST00000580751 ALG3Q92685 438 aa15.92■□□□□ 0.14
SS18-216ENST00000580751 KRT35Q92764 455 aa15.92■□□□□ 0.14
SS18-216ENST00000580751 LMLNQ96KR4 655 aa15.92■□□□□ 0.14
SS18-216ENST00000580751 CIPCQ9C0C6 399 aa15.92■□□□□ 0.14
SS18-216ENST00000580751 MUC3BQ9H195 1237 aa15.92■□□□□ 0.14
SS18-216ENST00000580751 PCDH18Q9HCL0 1135 aa15.92■□□□□ 0.14
SS18-216ENST00000580751 PACSIN2Q9UNF0 486 aaPredicted RBP15.92■□□□□ 0.14
SS18-216ENST00000580751 ILVBLA1L0T0 632 aa15.91■□□□□ 0.14
SS18-216ENST00000580751 WASH4PA8MWX3 477 aa15.91■□□□□ 0.14
SS18-216ENST00000580751 NPC1O15118 1278 aa15.91■□□□□ 0.14
SS18-216ENST00000580751 PI15O43692 258 aa15.91■□□□□ 0.14
SS18-216ENST00000580751 ATG13O75143 517 aa15.91■□□□□ 0.14
SS18-216ENST00000580751 ATP5BP06576 529 aaKnown RBP15.91■□□□□ 0.14
SS18-216ENST00000580751 DCNP07585 359 aaKnown RBP15.91■□□□□ 0.14
SS18-216ENST00000580751 POLR2EP19388 210 aaKnown RBP15.91■□□□□ 0.14
SS18-216ENST00000580751 CSKP41240 450 aa15.91■□□□□ 0.14
SS18-216ENST00000580751 KIR2DL1P43626 348 aaPredicted RBP15.91■□□□□ 0.14
SS18-216ENST00000580751 PLK1P53350 603 aa15.91■□□□□ 0.14
SS18-216ENST00000580751 SEC13P55735 322 aa15.91■□□□□ 0.14
SS18-216ENST00000580751 PPP2R5EQ16537 467 aa15.91■□□□□ 0.14
SS18-216ENST00000580751 FUT11Q495W5 492 aa15.91■□□□□ 0.14
SS18-216ENST00000580751 HSF5Q4G112 596 aaPredicted RBP15.91■□□□□ 0.14
SS18-216ENST00000580751 PITRM1Q5JRX3 1037 aa15.91■□□□□ 0.14
SS18-216ENST00000580751 SEL1L2Q5TEA6 688 aa15.91■□□□□ 0.14
SS18-216ENST00000580751 CCDC181Q5TID7 509 aa15.91■□□□□ 0.14
SS18-216ENST00000580751 MBLAC2Q68D91 279 aa15.91■□□□□ 0.14
SS18-216ENST00000580751 Q6ZS52 159 aa15.91■□□□□ 0.14
SS18-216ENST00000580751 ADIPOR2Q86V24 386 aa15.91■□□□□ 0.14
SS18-216ENST00000580751 SFTPA1Q8IWL2 248 aa15.91■□□□□ 0.14
SS18-216ENST00000580751 KCTD6Q8NC69 237 aa15.91■□□□□ 0.14
SS18-216ENST00000580751 FAM71BQ8TC56 605 aa15.91■□□□□ 0.14
SS18-216ENST00000580751 ACDQ96AP0 544 aa15.91■□□□□ 0.14
SS18-216ENST00000580751 ZNF670Q9BS34 389 aa15.91■□□□□ 0.14
SS18-216ENST00000580751 ELOVL2Q9NXB9 296 aa15.91■□□□□ 0.14
SS18-216ENST00000580751 CWC15Q9P013 229 aaKnown RBP15.91■□□□□ 0.14
SS18-216ENST00000580751 DLGAP2Q9P1A6 1054 aa15.91■□□□□ 0.14
SS18-216ENST00000580751 VPS28Q9UK41 221 aa15.91■□□□□ 0.14
SS18-216ENST00000580751 LRRD1A4D1F6 860 aa15.9■□□□□ 0.14
SS18-216ENST00000580751 CHURC1-FNTBB4DL54 471 aa15.9■□□□□ 0.14
SS18-216ENST00000580751 PGRMC1O00264 195 aaKnown RBP15.9■□□□□ 0.14
SS18-216ENST00000580751 RAMP2O60895 175 aa15.9■□□□□ 0.14
SS18-216ENST00000580751 KRT1P04264 644 aa15.9■□□□□ 0.14
SS18-216ENST00000580751 ASLP04424 464 aa15.9■□□□□ 0.14
SS18-216ENST00000580751 GNA12Q03113 381 aa15.9■□□□□ 0.14
SS18-216ENST00000580751 SULT2A1Q06520 285 aa15.9■□□□□ 0.14
SS18-216ENST00000580751 DPYSQ14117 519 aa15.9■□□□□ 0.14
SS18-216ENST00000580751 TAZQ16635 292 aa15.9■□□□□ 0.14
SS18-216ENST00000580751 C2orf27AQ580R0 203 aa15.9■□□□□ 0.14
SS18-216ENST00000580751 RNF219Q5W0B1 726 aaPredicted RBP15.9■□□□□ 0.14
SS18-216ENST00000580751 ZNF513Q8N8E2 541 aaPredicted RBP15.9■□□□□ 0.14
SS18-216ENST00000580751 TMEM105Q8N8V8 129 aa15.9■□□□□ 0.14
SS18-216ENST00000580751 RPLP0P6Q8NHW5 317 aa15.9■□□□□ 0.14
SS18-216ENST00000580751 USP33Q8TEY7 942 aa15.9■□□□□ 0.14
SS18-216ENST00000580751 COG1Q8WTW3 980 aa15.9■□□□□ 0.14
SS18-216ENST00000580751 TSC1Q92574 1164 aa15.9■□□□□ 0.14
SS18-216ENST00000580751 TTC17Q96AE7 1141 aa15.9■□□□□ 0.14
SS18-216ENST00000580751 CSPG4P5Q96PW8 444 aa15.9■□□□□ 0.14
SS18-216ENST00000580751 FEM1AQ9BSK4 669 aa15.9■□□□□ 0.14
SS18-216ENST00000580751 C2orf49Q9BVC5 232 aaPredicted RBP15.9■□□□□ 0.14
SS18-216ENST00000580751 CALN1Q9BXU9 219 aa15.9■□□□□ 0.14
SS18-216ENST00000580751 KLHL11Q9NVR0 708 aa15.9■□□□□ 0.14
SS18-216ENST00000580751 INTS6Q9UL03 887 aaKnown RBP15.9■□□□□ 0.14
SS18-216ENST00000580751 CEP104O60308 925 aa15.89■□□□□ 0.13
SS18-216ENST00000580751 DLDP09622 509 aaKnown RBP15.89■□□□□ 0.13
SS18-216ENST00000580751 HNRNPLP14866 589 aaKnown RBP eCLIP15.89■□□□□ 0.131e-9■■■■■ 30.1
SS18-216ENST00000580751 ERCC2P18074 760 aa15.89■□□□□ 0.13
SS18-216ENST00000580751 MZF1P28698 734 aaPredicted RBP15.89■□□□□ 0.13
SS18-216ENST00000580751 ARSEP51690 589 aa15.89■□□□□ 0.13
SS18-216ENST00000580751 YBEYP58557 167 aaPredicted RBP15.89■□□□□ 0.13
SS18-216ENST00000580751 DPYSL3Q14195 570 aa15.89■□□□□ 0.13
SS18-216ENST00000580751 ATP13A4Q4VNC1 1196 aa15.89■□□□□ 0.13
SS18-216ENST00000580751 TMEM215Q68D42 235 aa15.89■□□□□ 0.13
SS18-216ENST00000580751 UMODL1-AS1Q8N2C9 162 aa15.89■□□□□ 0.13
SS18-216ENST00000580751 SPEM1Q8N4L4 309 aa15.89■□□□□ 0.13
SS18-216ENST00000580751 DCAF4L2Q8NA75 395 aa15.89■□□□□ 0.13
SS18-216ENST00000580751 OR52K2Q8NGK3 314 aa15.89■□□□□ 0.13
SS18-216ENST00000580751 MAGEH1Q9H213 219 aa15.89■□□□□ 0.13
SS18-216ENST00000580751 HOMER3Q9NSC5 361 aa15.89■□□□□ 0.13
SS18-216ENST00000580751 PLA2G4CQ9UP65 541 aa15.89■□□□□ 0.13
SS18-216ENST00000580751 OR51B4Q9Y5P0 310 aa15.89■□□□□ 0.13
SS18-216ENST00000580751 CD48P09326 243 aa15.88■□□□□ 0.13
SS18-216ENST00000580751 PYGMP11217 842 aa15.88■□□□□ 0.13
SS18-216ENST00000580751 CHRM1P11229 460 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms