RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 WDCPQ9H6R7 721 aa14.92□□□□□ -0.02
SMARCE1-216ENST00000580419 SYNCQ9H7C4 482 aa14.92□□□□□ -0.02
SMARCE1-216ENST00000580419 ERVMER34-1Q9H9K5 563 aa14.92□□□□□ -0.02
SMARCE1-216ENST00000580419 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.92□□□□□ -0.02
SMARCE1-216ENST00000580419 DMTF1Q9Y222 760 aa14.92□□□□□ -0.02
SMARCE1-216ENST00000580419 FNDC3AQ9Y2H6 1198 aaKnown RBP14.92□□□□□ -0.02
SMARCE1-216ENST00000580419 HS3ST4Q9Y661 456 aa14.92□□□□□ -0.02
SMARCE1-216ENST00000580419 PLXNA2O75051 1894 aa14.92□□□□□ -0.02
SMARCE1-216ENST00000580419 ZFHX4Q86UP3 3567 aa14.92□□□□□ -0.02
SMARCE1-216ENST00000580419 ZFYVE26Q68DK2 2539 aa14.92□□□□□ -0.02
SMARCE1-216ENST00000580419 A0A1B0GVT2 93 aa14.91□□□□□ -0.02
SMARCE1-216ENST00000580419 TTC34A8MYJ7 566 aa14.91□□□□□ -0.02
SMARCE1-216ENST00000580419 M0QYT0 321 aa14.91□□□□□ -0.02
SMARCE1-216ENST00000580419 MCF2LO15068 1137 aa14.91□□□□□ -0.02
SMARCE1-216ENST00000580419 MID1O15344 667 aa14.91□□□□□ -0.02
SMARCE1-216ENST00000580419 PAGE1O75459 146 aa14.91□□□□□ -0.02
SMARCE1-216ENST00000580419 ENDOD1O94919 500 aa14.91□□□□□ -0.02
SMARCE1-216ENST00000580419 CTSOP43234 321 aaPredicted RBP14.91□□□□□ -0.02
SMARCE1-216ENST00000580419 CSNK1EP49674 416 aaKnown RBP14.91□□□□□ -0.02
SMARCE1-216ENST00000580419 FAM193AP78312 1265 aa14.91□□□□□ -0.02
SMARCE1-216ENST00000580419 NRG1Q02297 640 aaPredicted RBP14.91□□□□□ -0.02
SMARCE1-216ENST00000580419 APBA1Q02410 837 aa14.91□□□□□ -0.02
SMARCE1-216ENST00000580419 SLC20A2Q08357 652 aa14.91□□□□□ -0.02
SMARCE1-216ENST00000580419 CCDC15Q0P6D6 951 aa14.91□□□□□ -0.02
SMARCE1-216ENST00000580419 KCNJ12Q14500 433 aa14.91□□□□□ -0.02
SMARCE1-216ENST00000580419 OTUD1Q5VV17 481 aaPredicted RBP14.91□□□□□ -0.02
SMARCE1-216ENST00000580419 NEK5Q6P3R8 708 aa14.91□□□□□ -0.02
SMARCE1-216ENST00000580419 MMS22LQ6ZRQ5 1243 aa14.91□□□□□ -0.02
SMARCE1-216ENST00000580419 ERICH1Q86X53 443 aa14.91□□□□□ -0.02
SMARCE1-216ENST00000580419 MMAAQ8IVH4 418 aaKnown RBP14.91□□□□□ -0.02
SMARCE1-216ENST00000580419 DHX40Q8IX18 779 aaKnown RBP14.91□□□□□ -0.02
SMARCE1-216ENST00000580419 ZNF683Q8IZ20 524 aa14.91□□□□□ -0.02
SMARCE1-216ENST00000580419 OXR1Q8N573 874 aa14.91□□□□□ -0.02
SMARCE1-216ENST00000580419 OR2I1PQ8NGU4 316 aa14.91□□□□□ -0.02
SMARCE1-216ENST00000580419 OR8D1Q8WZ84 308 aa14.91□□□□□ -0.02
SMARCE1-216ENST00000580419 OMDQ99983 421 aa14.91□□□□□ -0.02
SMARCE1-216ENST00000580419 C2orf49Q9BVC5 232 aaPredicted RBP14.91□□□□□ -0.02
SMARCE1-216ENST00000580419 ACE2Q9BYF1 805 aaPredicted RBP14.91□□□□□ -0.02
SMARCE1-216ENST00000580419 PIGVQ9NUD9 493 aa14.91□□□□□ -0.02
SMARCE1-216ENST00000580419 SLC25A13Q9UJS0 675 aa14.91□□□□□ -0.02
SMARCE1-216ENST00000580419 AJAP1Q9UKB5 411 aaPredicted RBP14.91□□□□□ -0.02
SMARCE1-216ENST00000580419 PPM1HQ9ULR3 514 aa14.91□□□□□ -0.02
SMARCE1-216ENST00000580419 PLXNB3Q9ULL4 1909 aa14.91□□□□□ -0.02
SMARCE1-216ENST00000580419 LRRC10BA6NIK2 292 aa14.9□□□□□ -0.02
SMARCE1-216ENST00000580419 C1QTNF9BB2RNN3 333 aa14.9□□□□□ -0.02
SMARCE1-216ENST00000580419 F8VZ95 297 aa14.9□□□□□ -0.02
SMARCE1-216ENST00000580419 HYAL3O43820 417 aaPredicted RBP14.9□□□□□ -0.02
SMARCE1-216ENST00000580419 MAGEC1O60732 1142 aa14.9□□□□□ -0.02
SMARCE1-216ENST00000580419 RNGTTO60942 597 aaKnown RBP14.9□□□□□ -0.02
SMARCE1-216ENST00000580419 CAPNS1P04632 268 aa14.9□□□□□ -0.02
SMARCE1-216ENST00000580419 FTH1P19P0C7X4 201 aa14.9□□□□□ -0.02
SMARCE1-216ENST00000580419 C1QTNF9P0C862 333 aa14.9□□□□□ -0.02
SMARCE1-216ENST00000580419 PDGFRAP16234 1089 aa14.9□□□□□ -0.02
SMARCE1-216ENST00000580419 DRD3P35462 400 aa14.9□□□□□ -0.02
SMARCE1-216ENST00000580419 CCT8P50990 548 aa14.9□□□□□ -0.02
SMARCE1-216ENST00000580419 ADPRHP54922 357 aa14.9□□□□□ -0.02
SMARCE1-216ENST00000580419 GSCP56915 257 aaPredicted RBP14.9□□□□□ -0.02
SMARCE1-216ENST00000580419 KRT83P78385 493 aa14.9□□□□□ -0.02
SMARCE1-216ENST00000580419 CDKAL1Q5VV42 579 aa14.9□□□□□ -0.02
SMARCE1-216ENST00000580419 NCEH1Q6PIU2 408 aa14.9□□□□□ -0.02
SMARCE1-216ENST00000580419 ZSCAN30Q86W11 494 aa14.9□□□□□ -0.02
SMARCE1-216ENST00000580419 TRIM69Q86WT6 500 aa14.9□□□□□ -0.02
SMARCE1-216ENST00000580419 CACUL1Q86Y37 369 aa14.9□□□□□ -0.02
SMARCE1-216ENST00000580419 XYLT1Q86Y38 959 aa14.9□□□□□ -0.02
SMARCE1-216ENST00000580419 PASD1Q8IV76 773 aa14.9□□□□□ -0.02
SMARCE1-216ENST00000580419 SH2D3CQ8N5H7 860 aa14.9□□□□□ -0.02
SMARCE1-216ENST00000580419 AADATQ8N5Z0 425 aa14.9□□□□□ -0.02
SMARCE1-216ENST00000580419 EPS8L1Q8TE68 723 aa14.9□□□□□ -0.02
SMARCE1-216ENST00000580419 CCDC114Q96M63 670 aa14.9□□□□□ -0.02
SMARCE1-216ENST00000580419 DKK4Q9UBT3 224 aa14.9□□□□□ -0.02
SMARCE1-216ENST00000580419 SERGEFQ9UGK8 458 aa14.9□□□□□ -0.02
SMARCE1-216ENST00000580419 TMEM59LQ9UK28 342 aa14.9□□□□□ -0.02
SMARCE1-216ENST00000580419 SNX11Q9Y5W9 270 aa14.9□□□□□ -0.02
SMARCE1-216ENST00000580419 A0A1B0GTQ1 180 aa14.89□□□□□ -0.03
SMARCE1-216ENST00000580419 A0A1W2PP55 124 aa14.89□□□□□ -0.03
SMARCE1-216ENST00000580419 RNASEH2AO75792 299 aaKnown RBP14.89□□□□□ -0.03
SMARCE1-216ENST00000580419 KRT37O76014 449 aa14.89□□□□□ -0.03
SMARCE1-216ENST00000580419 FSBPO95073 299 aa14.89□□□□□ -0.03
SMARCE1-216ENST00000580419 RXRGP48443 463 aa14.89□□□□□ -0.03
SMARCE1-216ENST00000580419 NOMO3P69849 1222 aa14.89□□□□□ -0.03
SMARCE1-216ENST00000580419 NME3Q13232 169 aa14.89□□□□□ -0.03
SMARCE1-216ENST00000580419 SLC45A4Q5BKX6 768 aa14.89□□□□□ -0.03
SMARCE1-216ENST00000580419 LRRC31Q6UY01 552 aa14.89□□□□□ -0.03
SMARCE1-216ENST00000580419 TRIM72Q6ZMU5 477 aa14.89□□□□□ -0.03
SMARCE1-216ENST00000580419 PLPP6Q8IY26 295 aa14.89□□□□□ -0.03
SMARCE1-216ENST00000580419 STK40Q8N2I9 435 aa14.89□□□□□ -0.03
SMARCE1-216ENST00000580419 MFSD2AQ8NA29 543 aa14.89□□□□□ -0.03
SMARCE1-216ENST00000580419 DCAF4L2Q8NA75 395 aa14.89□□□□□ -0.03
SMARCE1-216ENST00000580419 TMIEQ8NEW7 156 aa14.89□□□□□ -0.03
SMARCE1-216ENST00000580419 SNX19Q92543 992 aa14.89□□□□□ -0.03
SMARCE1-216ENST00000580419 RPL10LQ96L21 214 aaKnown RBP14.89□□□□□ -0.03
SMARCE1-216ENST00000580419 TKTL2Q9H0I9 626 aa14.89□□□□□ -0.03
SMARCE1-216ENST00000580419 PDCL3Q9H2J4 239 aa14.89□□□□□ -0.03
SMARCE1-216ENST00000580419 MTG2Q9H4K7 406 aa14.89□□□□□ -0.03
SMARCE1-216ENST00000580419 IL21RQ9HBE5 538 aa14.89□□□□□ -0.03
SMARCE1-216ENST00000580419 SAMSN1Q9NSI8 373 aaKnown RBP14.89□□□□□ -0.03
SMARCE1-216ENST00000580419 PPARGC1AQ9UBK2 798 aaKnown RBP14.89□□□□□ -0.03
SMARCE1-216ENST00000580419 VPS28Q9UK41 221 aa14.89□□□□□ -0.03
SMARCE1-216ENST00000580419 VANGL2Q9ULK5 521 aa14.89□□□□□ -0.03
SMARCE1-216ENST00000580419 FARP1Q9Y4F1 1045 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms