RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 NCEH1Q6PIU2 408 aa20.04■□□□□ 0.8
LIMD2-209ENST00000580222 KDM7AQ6ZMT4 941 aa20.04■□□□□ 0.8
LIMD2-209ENST00000580222 CHST9Q7L1S5 443 aa20.04■□□□□ 0.8
LIMD2-209ENST00000580222 CACTIN-AS1Q8N1I8 211 aa20.04■□□□□ 0.8
LIMD2-209ENST00000580222 KIAA1257Q9ULG3 409 aa20.04■□□□□ 0.8
LIMD2-209ENST00000580222 USP3Q9Y6I4 520 aa20.04■□□□□ 0.8
LIMD2-209ENST00000580222 CYBBP04839 570 aa20.03■□□□□ 0.8
LIMD2-209ENST00000580222 CKMT2P17540 419 aa20.03■□□□□ 0.8
LIMD2-209ENST00000580222 CASP14P31944 242 aa20.03■□□□□ 0.8
LIMD2-209ENST00000580222 CLCN1P35523 988 aa20.03■□□□□ 0.8
LIMD2-209ENST00000580222 STILQ15468 1287 aa20.03■□□□□ 0.8
LIMD2-209ENST00000580222 GOLGA7BQ2TAP0 167 aa20.03■□□□□ 0.8
LIMD2-209ENST00000580222 CCDC186Q7Z3E2 898 aa20.03■□□□□ 0.8
LIMD2-209ENST00000580222 KIAA0907Q7Z7F0 614 aaPredicted RBP20.03■□□□□ 0.8
LIMD2-209ENST00000580222 SPATS2Q86XZ4 545 aaKnown RBP20.03■□□□□ 0.8
LIMD2-209ENST00000580222 DRC7Q8IY82 874 aa20.03■□□□□ 0.8
LIMD2-209ENST00000580222 ZNF248Q8NDW4 579 aa20.03■□□□□ 0.8
LIMD2-209ENST00000580222 DCLK3Q9C098 648 aa20.03■□□□□ 0.8
LIMD2-209ENST00000580222 NEUROG2Q9H2A3 272 aa20.03■□□□□ 0.8
LIMD2-209ENST00000580222 ACP6Q9NPH0 428 aa20.03■□□□□ 0.8
LIMD2-209ENST00000580222 AASDHPPTQ9NRN7 309 aa20.03■□□□□ 0.8
LIMD2-209ENST00000580222 ABCB8Q9NUT2 735 aa20.03■□□□□ 0.8
LIMD2-209ENST00000580222 CLIC5Q9NZA1 410 aa20.03■□□□□ 0.8
LIMD2-209ENST00000580222 HESX1Q9UBX0 185 aa20.03■□□□□ 0.8
LIMD2-209ENST00000580222 TSPAN16Q9UKR8 245 aa20.03■□□□□ 0.8
LIMD2-209ENST00000580222 CAPN11Q9UMQ6 739 aa20.03■□□□□ 0.8
LIMD2-209ENST00000580222 PLA2G4CQ9UP65 541 aa20.03■□□□□ 0.8
LIMD2-209ENST00000580222 LUC7L2Q9Y383 392 aaKnown RBP20.03■□□□□ 0.8
LIMD2-209ENST00000580222 MYLKQ15746 1914 aa20.02■□□□□ 0.8
LIMD2-209ENST00000580222 SLC12A8A0AV02 714 aa20.02■□□□□ 0.8
LIMD2-209ENST00000580222 MED7O43513 233 aa20.02■□□□□ 0.8
LIMD2-209ENST00000580222 SLC28A2O43868 658 aa20.02■□□□□ 0.8
LIMD2-209ENST00000580222 CCDC172P0C7W6 258 aa20.02■□□□□ 0.8
LIMD2-209ENST00000580222 FERP16591 822 aa20.02■□□□□ 0.8
LIMD2-209ENST00000580222 CD38P28907 300 aa20.02■□□□□ 0.8
LIMD2-209ENST00000580222 CDC25BP30305 580 aa20.02■□□□□ 0.8
LIMD2-209ENST00000580222 SGSHP51688 502 aa20.02■□□□□ 0.8
LIMD2-209ENST00000580222 ZBED6P86452 979 aa20.02■□□□□ 0.8
LIMD2-209ENST00000580222 GSE1Q14687 1217 aa20.02■□□□□ 0.8
LIMD2-209ENST00000580222 ASIC2Q16515 512 aa20.02■□□□□ 0.8
LIMD2-209ENST00000580222 SLC47A2Q86VL8 602 aa20.02■□□□□ 0.8
LIMD2-209ENST00000580222 WFDC5Q8TCV5 224 aa20.02■□□□□ 0.8
LIMD2-209ENST00000580222 TFAP2BQ92481 460 aa20.02■□□□□ 0.8
LIMD2-209ENST00000580222 NUCKS1Q9H1E3 243 aaKnown RBP20.02■□□□□ 0.8
LIMD2-209ENST00000580222 RSPH9Q9H1X1 276 aaPredicted RBP20.02■□□□□ 0.8
LIMD2-209ENST00000580222 PABPC3Q9H361 631 aaKnown RBP20.02■□□□□ 0.8
LIMD2-209ENST00000580222 CAAP1Q9H8G2 361 aa20.02■□□□□ 0.8
LIMD2-209ENST00000580222 GDF3Q9NR23 364 aa20.02■□□□□ 0.8
LIMD2-209ENST00000580222 FBXL12Q9NXK8 326 aa20.02■□□□□ 0.8
LIMD2-209ENST00000580222 O00370 1275 aa20.01■□□□□ 0.79
LIMD2-209ENST00000580222 TRIM38O00635 465 aa20.01■□□□□ 0.79
LIMD2-209ENST00000580222 MT-CO3P00414 261 aa20.01■□□□□ 0.79
LIMD2-209ENST00000580222 MPOP05164 745 aa20.01■□□□□ 0.79
LIMD2-209ENST00000580222 RALAP11233 206 aa20.01■□□□□ 0.79
LIMD2-209ENST00000580222 TMPRSS3P57727 454 aa20.01■□□□□ 0.79
LIMD2-209ENST00000580222 NXPH1P58417 271 aa20.01■□□□□ 0.79
LIMD2-209ENST00000580222 ILKQ13418 452 aa20.01■□□□□ 0.79
LIMD2-209ENST00000580222 E2F5Q15329 346 aa20.01■□□□□ 0.79
LIMD2-209ENST00000580222 PROX2Q3B8N5 592 aa20.01■□□□□ 0.79
LIMD2-209ENST00000580222 ZNF776Q68DI1 518 aaPredicted RBP20.01■□□□□ 0.79
LIMD2-209ENST00000580222 GANCQ8TET4 914 aa20.01■□□□□ 0.79
LIMD2-209ENST00000580222 MYO19Q96H55 970 aa20.01■□□□□ 0.79
LIMD2-209ENST00000580222 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.01■□□□□ 0.79
LIMD2-209ENST00000580222 MARCH2Q9P0N8 246 aa20.01■□□□□ 0.79
LIMD2-209ENST00000580222 PLXNA2O75051 1894 aa20.01■□□□□ 0.79
LIMD2-209ENST00000580222 M0QYV0 167 aa20■□□□□ 0.79
LIMD2-209ENST00000580222 TLR4O00206 839 aa20■□□□□ 0.79
LIMD2-209ENST00000580222 CYP11B1P15538 503 aa20■□□□□ 0.79
LIMD2-209ENST00000580222 KRT9P35527 623 aa20■□□□□ 0.79
LIMD2-209ENST00000580222 RXRGP48443 463 aa20■□□□□ 0.79
LIMD2-209ENST00000580222 PSEN1P49768 467 aa20■□□□□ 0.79
LIMD2-209ENST00000580222 CNGA2Q16280 664 aa20■□□□□ 0.79
LIMD2-209ENST00000580222 TTC31Q49AM3 519 aaPredicted RBP20■□□□□ 0.79
LIMD2-209ENST00000580222 TAF3Q5VWG9 929 aa20■□□□□ 0.79
LIMD2-209ENST00000580222 MBLAC2Q68D91 279 aa20■□□□□ 0.79
LIMD2-209ENST00000580222 DDX51Q8N8A6 666 aaKnown RBP eCLIP20■□□□□ 0.79
LIMD2-209ENST00000580222 EPS8L1Q8TE68 723 aa20■□□□□ 0.79
LIMD2-209ENST00000580222 ZNF606Q8WXB4 792 aa20■□□□□ 0.79
LIMD2-209ENST00000580222 ZSWIM1Q9BR11 485 aa20■□□□□ 0.79
LIMD2-209ENST00000580222 PDCL3Q9H2J4 239 aa20■□□□□ 0.79
LIMD2-209ENST00000580222 PNPLA8Q9NP80 782 aa20■□□□□ 0.79
LIMD2-209ENST00000580222 GGA2Q9UJY4 613 aa20■□□□□ 0.79
LIMD2-209ENST00000580222 TEX15Q9BXT5 2789 aa19.99■□□□□ 0.79
LIMD2-209ENST00000580222 A0A1W2PP55 124 aa19.99■□□□□ 0.79
LIMD2-209ENST00000580222 MID1O15344 667 aa19.99■□□□□ 0.79
LIMD2-209ENST00000580222 MFAP3LO75121 409 aa19.99■□□□□ 0.79
LIMD2-209ENST00000580222 DLDP09622 509 aaKnown RBP19.99■□□□□ 0.79
LIMD2-209ENST00000580222 ACP1P24666 158 aa19.99■□□□□ 0.79
LIMD2-209ENST00000580222 CD70P32970 193 aa19.99■□□□□ 0.79
LIMD2-209ENST00000580222 SLC8A3P57103 927 aa19.99■□□□□ 0.79
LIMD2-209ENST00000580222 PCBP4P57723 403 aaKnown RBP19.99■□□□□ 0.79
LIMD2-209ENST00000580222 BST2Q10589 180 aaKnown RBP19.99■□□□□ 0.79
LIMD2-209ENST00000580222 TRIP4Q15650 581 aaPredicted RBP19.99■□□□□ 0.79
LIMD2-209ENST00000580222 MPPE1Q53F39 396 aa19.99■□□□□ 0.79
LIMD2-209ENST00000580222 KIAA1614Q5VZ46 1190 aa19.99■□□□□ 0.79
LIMD2-209ENST00000580222 LCLAT1Q6UWP7 414 aa19.99■□□□□ 0.79
LIMD2-209ENST00000580222 USP30Q70CQ3 517 aa19.99■□□□□ 0.79
LIMD2-209ENST00000580222 TADA2BQ86TJ2 420 aa19.99■□□□□ 0.79
LIMD2-209ENST00000580222 NOP9Q86U38 636 aaKnown RBP19.99■□□□□ 0.79
LIMD2-209ENST00000580222 ANKRD52Q8NB46 1076 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms