RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 TLR8Q9NR97 1041 aaKnown RBP3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 GKN1Q9NS71 199 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 OBP2AQ9NY56 170 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 TRPM5Q9NZQ8 1165 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 IMPACTQ9P2X3 320 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 UXTQ9UBK9 157 aaPredicted RBP3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 HESX1Q9UBX0 185 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 ZNF212Q9UDV6 495 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 ADAMTS1Q9UHI8 967 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 NUDT5Q9UKK9 219 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 MAGED2Q9UNF1 606 aaPredicted RBP3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 TFR2Q9UP52 801 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 NAALADL1Q9UQQ1 740 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.95□□□□□ -1.783e-7■■■□□ 16.8
SMARCE1-215ENST00000578995 NUMBLQ9Y6R0 609 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 NUMA1Q14980 2115 aa3.95□□□□□ -1.78
SMARCE1-215ENST00000578995 WDFY4Q6ZS81 3184 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 RALGAPA1Q6GYQ0 2036 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 PLXNB3Q9ULL4 1909 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 TRAV19A0A0A6YYK7 116 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 ANTXRLA6NF34 631 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 TMEM191CA6NGB0 347 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 SOWAHDA6NJG2 315 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 SIGLEC16A6NMB1 481 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 HEPACAM2A8MVW5 462 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 KCNU1A8MYU2 1149 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 EIF3CLB5ME19 914 aaKnown RBP3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 AKR1B15C9JRZ8 316 aaPredicted RBP3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 LEFTY2O00292 366 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 CCP110O43303 1012 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 MSI1O43347 362 aaKnown RBP3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 HSF2BPO75031 334 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 RTN2O75298 545 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 LEFTY1O75610 366 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 MTA2O94776 668 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 CLSTN1O94985 981 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 ABL1P00519 1130 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 FTLP02792 175 aaPredicted RBP3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 TCF4P15884 667 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 HDCP19113 662 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 SP100P23497 879 aaPredicted RBP3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 SLC6A4P31645 630 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 RFC1P35251 1148 aaPredicted RBP3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 MATKP42679 507 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 PTPN9P43378 593 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 CXCR3P49682 368 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 SGSHP51688 502 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 ATXN1P54253 815 aaKnown RBP3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 GALCP54803 685 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 HADHBP55084 474 aaKnown RBP3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 HDAC4P56524 1084 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 YWHAZP63104 245 aaKnown RBP3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 RING1Q06587 406 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 EFEMP1Q12805 493 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 IFRD2Q12894 506 aaPredicted RBP3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 SEMA3BQ13214 749 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 MAMLD1Q13495 774 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 GRM2Q14416 872 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 AAK1Q2M2I8 961 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 CCDC14Q49A88 953 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 C5orf22Q49AR2 442 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 ZNF385BQ569K4 471 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 FAM133BQ5BKY9 247 aaKnown RBP3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 HECTD3Q5T447 861 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 MANEALQ5VSG8 457 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 NAIF1Q69YI7 327 aaPredicted RBP3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 EP400NLQ6ZTU2 488 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 HTR3DQ70Z44 454 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 LSRQ86X29 649 aaPredicted RBP3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 ERICH1Q86X53 443 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 ZDHHC17Q8IUH5 632 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 CNGA4Q8IV77 575 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 FMNL3Q8IVF7 1028 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 MFSD6LQ8IWD5 586 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 BBS7Q8IWZ6 715 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 DEFB106AQ8N104 65 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 SIX6OS1Q8N1H7 587 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 ELMOD1Q8N336 334 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 CELF5Q8N6W0 485 aaKnown RBP3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 EMC1Q8N766 993 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 BPIFB1Q8TDL5 484 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 SH3RF2Q8TEC5 729 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 FNIP1Q8TF40 1166 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 MRPS31Q92665 395 aaKnown RBP3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 PMEPA1Q969W9 287 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 C18orf8Q96DM3 657 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 VCPIP1Q96JH7 1222 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 ZFYVE19Q96K21 471 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 RPGRIP1Q96KN7 1286 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 LMLNQ96KR4 655 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 PRICKLE1Q96MT3 831 aaPredicted RBP3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 PEBP4Q96S96 227 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 PPP1R9BQ96SB3 815 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 TBCBQ99426 244 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 EIF3CQ99613 913 aaKnown RBP3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 KXD1Q9BQD3 176 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 ANP32EQ9BTT0 268 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 DUSP23Q9BVJ7 150 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 MAGEB5Q9BZ81 275 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 THAP2Q9H0W7 228 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms