RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 DKK1O94907 266 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 ENDOD1O94919 500 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 LUC7L3O95232 432 aaKnown RBP3.96□□□□□ -1.78
NUP85-209ENST00000578987 SMC2O95347 1197 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 MOCS3O95396 460 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 LATS1O95835 1130 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 MT-CO1P00395 513 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 ASLP04424 464 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 SRPRAP08240 638 aaKnown RBP3.96□□□□□ -1.78
NUP85-209ENST00000578987 TFE3P19532 575 aaPredicted RBP3.96□□□□□ -1.78
NUP85-209ENST00000578987 SLC9A1P19634 815 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 PTMSP20962 102 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 C5AR1P21730 350 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 DRD3P35462 400 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 SOX11P35716 441 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 USP8P40818 1118 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 CCT8P50990 548 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 ADPRHP54922 357 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 MARSP56192 900 aaKnown RBP3.96□□□□□ -1.78
NUP85-209ENST00000578987 RNASE9P60153 205 aaKnown RBP3.96□□□□□ -1.78
NUP85-209ENST00000578987 PPP2CBP62714 309 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 PPP2CAP67775 309 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 CENPCQ03188 943 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 ZBTB16Q05516 673 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 LRRC63Q05C16 580 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 CNTN1Q12860 1018 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 SFSWAPQ12872 951 aaKnown RBP3.96□□□□□ -1.78
NUP85-209ENST00000578987 NME3Q13232 169 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 CDH18Q13634 790 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 DLG2Q15700 870 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 SMAD1Q15797 465 aaKnown RBP3.96□□□□□ -1.78
NUP85-209ENST00000578987 HNRNPA1L2Q32P51 320 aaKnown RBP3.96□□□□□ -1.78
NUP85-209ENST00000578987 TTC31Q49AM3 519 aaPredicted RBP3.96□□□□□ -1.78
NUP85-209ENST00000578987 ZNF542PQ5EBM4 170 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 MPP7Q5T2T1 576 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 HES3Q5TGS1 186 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 RNF219Q5W0B1 726 aaPredicted RBP3.96□□□□□ -1.78
NUP85-209ENST00000578987 OR6B2Q6IFH4 312 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 TTI2Q6NXR4 508 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 KDM7AQ6ZMT4 941 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 USP30Q70CQ3 517 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 TMC6Q7Z403 805 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 C14orf80Q86SX3 495 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 PRPF39Q86UA1 669 aaKnown RBP3.96□□□□□ -1.78
NUP85-209ENST00000578987 CHSY1Q86X52 802 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 PASD1Q8IV76 773 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 CCDC117Q8IWD4 279 aaPredicted RBP3.96□□□□□ -1.78
NUP85-209ENST00000578987 DEFB106AQ8N104 65 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 CCAR2Q8N163 923 aaKnown RBP3.96□□□□□ -1.78
NUP85-209ENST00000578987 PDCD7Q8N8D1 485 aaKnown RBP3.96□□□□□ -1.78
NUP85-209ENST00000578987 ATP6V0D2Q8N8Y2 350 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 HJURPQ8NCD3 748 aaPredicted RBP3.96□□□□□ -1.78
NUP85-209ENST00000578987 SPATA20Q8TB22 786 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 SAP25Q8TEE9 199 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 FRS2Q8WU20 508 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 NELFBQ8WX92 580 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 ZNF606Q8WXB4 792 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 IRGQQ8WZA9 623 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 TSC1Q92574 1164 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 AZIN2Q96A70 460 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 ALG14Q96F25 216 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 HSFY1Q96LI6 401 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 GSDMAQ96QA5 445 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 PRMT1Q99873 361 aaKnown RBP3.96□□□□□ -1.78
NUP85-209ENST00000578987 DDX50Q9BQ39 737 aaKnown RBP3.96□□□□□ -1.78
NUP85-209ENST00000578987 SLC4A5Q9BY07 1137 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 INTS2Q9H0H0 1204 aaKnown RBP3.96□□□□□ -1.78
NUP85-209ENST00000578987 SIK2Q9H0K1 926 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 THAP9Q9H5L6 903 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 FBRSQ9HAH7 460 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 OSGEPQ9NPF4 335 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 FZD3Q9NPG1 666 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 PLCB1Q9NQ66 1216 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 ANLNQ9NQW6 1124 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 GDF3Q9NR23 364 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 TMPRSS4Q9NRS4 437 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 LMBRD1Q9NUN5 540 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 RMND1Q9NWS8 449 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 UCKL1Q9NWZ5 548 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 SLC12A6Q9UHW9 1150 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 VANGL2Q9ULK5 521 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 NBEAQ8NFP9 2946 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 COL27A1Q8IZC6 1860 aaPredicted RBP3.96□□□□□ -1.78
NUP85-209ENST00000578987 SCN8AQ9UQD0 1980 aa3.96□□□□□ -1.78
NUP85-209ENST00000578987 ARHGEF17Q96PE2 2063 aaPredicted RBP3.96□□□□□ -1.78
NUP85-209ENST00000578987 A0A087WV48 116 aa3.95□□□□□ -1.78
NUP85-209ENST00000578987 TYW5A2RUC4 315 aaKnown RBP3.95□□□□□ -1.78
NUP85-209ENST00000578987 SOWAHDA6NJG2 315 aa3.95□□□□□ -1.78
NUP85-209ENST00000578987 BECN2A8MW95 431 aa3.95□□□□□ -1.78
NUP85-209ENST00000578987 KCNU1A8MYU2 1149 aa3.95□□□□□ -1.78
NUP85-209ENST00000578987 F5H5T6 163 aa3.95□□□□□ -1.78
NUP85-209ENST00000578987 PYCARD-AS1I3L0S3 204 aa3.95□□□□□ -1.78
NUP85-209ENST00000578987 M0QYT0 321 aa3.95□□□□□ -1.78
NUP85-209ENST00000578987 TRIM38O00635 465 aa3.95□□□□□ -1.78
NUP85-209ENST00000578987 PSMA7O14818 248 aa3.95□□□□□ -1.78
NUP85-209ENST00000578987 CASC3O15234 703 aaKnown RBP3.95□□□□□ -1.78
NUP85-209ENST00000578987 FFAR2O15552 330 aa3.95□□□□□ -1.78
NUP85-209ENST00000578987 SMAD6O43541 496 aaKnown RBP3.95□□□□□ -1.78
NUP85-209ENST00000578987 SIGLEC6O43699 453 aa3.95□□□□□ -1.78
NUP85-209ENST00000578987 DFNA5O60443 496 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms