RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 ZSCAN23Q3MJ62 389 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 ADGRF1Q5T601 910 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 C9orf64Q5T6V5 341 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 CNNM4Q6P4Q7 775 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 SCARA5Q6ZMJ2 495 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 UNC13DQ70J99 1090 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 RSRC2Q7L4I2 434 aaKnown RBP7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 PRPF39Q86UA1 669 aaKnown RBP7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 TRIM69Q86WT6 500 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 C12orf56Q8IXR9 622 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 CCDC65Q8IXS2 484 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 AADATQ8N5Z0 425 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 C12orf29Q8N999 325 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 XXYLT1Q8NBI6 393 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 WDR36Q8NI36 951 aaKnown RBP7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 WDR48Q8TAF3 677 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 ZNF564Q8TBZ8 553 aaPredicted RBP7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 MAPK15Q8TD08 544 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 ZNF516Q92618 1163 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 TAF4BQ92750 862 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 MIB2Q96AX9 1013 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 CCDC127Q96BQ5 260 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 MOCOSQ96EN8 888 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 TMA16Q96EY4 203 aaKnown RBP7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 ARHGAP9Q9BRR9 750 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 LRRC27Q9C0I9 530 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 ABCG4Q9H172 646 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 SDCBP2Q9H190 292 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 AGPAT3Q9NRZ7 376 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 OLA1Q9NTK5 396 aaKnown RBP7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 FAM49BQ9NUQ9 324 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 PANK4Q9NVE7 773 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 ARHGAP20Q9P2F6 1191 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 CYTH4Q9UIA0 394 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 PCDHGA7Q9Y5G6 932 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 U3KQA8 63 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 EDDM13A0A1B0GTR0 161 aa7.43□□□□□ -1.22
CDK5RAP3-209ENST00000578663 SLC12A8A0AV02 714 aa7.43□□□□□ -1.22
CDK5RAP3-209ENST00000578663 NEMP2A6NFY4 417 aa7.43□□□□□ -1.22
CDK5RAP3-209ENST00000578663 IRAK2O43187 625 aa7.43□□□□□ -1.22
CDK5RAP3-209ENST00000578663 GJB6O95452 261 aa7.43□□□□□ -1.22
CDK5RAP3-209ENST00000578663 MBD3O95983 291 aa7.43□□□□□ -1.22
CDK5RAP3-209ENST00000578663 RPN1P04843 607 aaKnown RBP7.43□□□□□ -1.22
CDK5RAP3-209ENST00000578663 SRPRAP08240 638 aaKnown RBP7.43□□□□□ -1.22
CDK5RAP3-209ENST00000578663 HMBSP08397 361 aa7.43□□□□□ -1.22
CDK5RAP3-209ENST00000578663 ADORA2BP29275 332 aa7.43□□□□□ -1.22
CDK5RAP3-209ENST00000578663 HOXD13P35453 343 aa7.43□□□□□ -1.22
CDK5RAP3-209ENST00000578663 CLDN10P78369 228 aa7.43□□□□□ -1.22
CDK5RAP3-209ENST00000578663 EHHADHQ08426 723 aa7.43□□□□□ -1.22
CDK5RAP3-209ENST00000578663 BIRC3Q13489 604 aa7.43□□□□□ -1.22
CDK5RAP3-209ENST00000578663 ELAVL3Q14576 367 aaKnown RBP7.43□□□□□ -1.22
CDK5RAP3-209ENST00000578663 STAT4Q14765 748 aa7.43□□□□□ -1.22
CDK5RAP3-209ENST00000578663 KMT5BQ4FZB7 885 aa7.43□□□□□ -1.22
CDK5RAP3-209ENST00000578663 SETMARQ53H47 684 aaPredicted RBP7.43□□□□□ -1.22
CDK5RAP3-209ENST00000578663 RBM44Q6ZP01 1051 aaKnown RBP7.43□□□□□ -1.22
CDK5RAP3-209ENST00000578663 USP53Q70EK8 1073 aa7.43□□□□□ -1.22
CDK5RAP3-209ENST00000578663 MAMDC2Q7Z304 686 aaPredicted RBP7.43□□□□□ -1.22
CDK5RAP3-209ENST00000578663 MMAAQ8IVH4 418 aaKnown RBP7.43□□□□□ -1.22
CDK5RAP3-209ENST00000578663 TMEM145Q8NBT3 493 aa7.43□□□□□ -1.22
CDK5RAP3-209ENST00000578663 OR14C36Q8NHC7 312 aa7.43□□□□□ -1.22
CDK5RAP3-209ENST00000578663 IFI44Q8TCB0 444 aa7.43□□□□□ -1.22
CDK5RAP3-209ENST00000578663 JAKMIP2Q96AA8 810 aa7.43□□□□□ -1.22
CDK5RAP3-209ENST00000578663 LMLNQ96KR4 655 aa7.43□□□□□ -1.22
CDK5RAP3-209ENST00000578663 MRGPRX3Q96LB0 322 aa7.43□□□□□ -1.22
CDK5RAP3-209ENST00000578663 APOLD1Q96LR9 279 aa7.43□□□□□ -1.22
CDK5RAP3-209ENST00000578663 SRRTQ9BXP5 876 aaKnown RBP7.43□□□□□ -1.22
CDK5RAP3-209ENST00000578663 DNAI2Q9GZS0 605 aa7.43□□□□□ -1.22
CDK5RAP3-209ENST00000578663 NUP62CLQ9H1M0 184 aa7.43□□□□□ -1.22
CDK5RAP3-209ENST00000578663 ADNPQ9H2P0 1102 aa7.43□□□□□ -1.22
CDK5RAP3-209ENST00000578663 GEMIN8Q9NWZ8 242 aaKnown RBP7.43□□□□□ -1.22
CDK5RAP3-209ENST00000578663 TMEM63CQ9P1W3 806 aa7.43□□□□□ -1.22
CDK5RAP3-209ENST00000578663 CGNQ9P2M7 1197 aaKnown RBP7.43□□□□□ -1.22
CDK5RAP3-209ENST00000578663 HMGXB4Q9UGU5 601 aa7.43□□□□□ -1.22
CDK5RAP3-209ENST00000578663 ENTPD2Q9Y5L3 495 aa7.43□□□□□ -1.22
CDK5RAP3-209ENST00000578663 STAB1Q9NY15 2570 aa7.43□□□□□ -1.22
CDK5RAP3-209ENST00000578663 RP1P56715 2156 aa7.42□□□□□ -1.22
CDK5RAP3-209ENST00000578663 SHANK1Q9Y566 2161 aa7.42□□□□□ -1.22
CDK5RAP3-209ENST00000578663 TBC1D3DA0A087WVF3 549 aa7.42□□□□□ -1.22
CDK5RAP3-209ENST00000578663 TBC1D3IA0A087WXS9 549 aa7.42□□□□□ -1.22
CDK5RAP3-209ENST00000578663 TBC1D3EA0A087X179 549 aa7.42□□□□□ -1.22
CDK5RAP3-209ENST00000578663 TBC1D3KA0A087X1G2 549 aa7.42□□□□□ -1.22
CDK5RAP3-209ENST00000578663 CCDC187A0A096LP49 1063 aa7.42□□□□□ -1.22
CDK5RAP3-209ENST00000578663 PVALEFA0A1B0GWK0 134 aa7.42□□□□□ -1.22
CDK5RAP3-209ENST00000578663 TBC1D3FA6NER0 549 aaPredicted RBP7.42□□□□□ -1.22
CDK5RAP3-209ENST00000578663 TBC1D3LB9A6J9 549 aa7.42□□□□□ -1.22
CDK5RAP3-209ENST00000578663 SCAMP1O15126 338 aa7.42□□□□□ -1.22
CDK5RAP3-209ENST00000578663 FFAR2O15552 330 aa7.42□□□□□ -1.22
CDK5RAP3-209ENST00000578663 TGFB1I1O43294 461 aa7.42□□□□□ -1.22
CDK5RAP3-209ENST00000578663 PLRG1O43660 514 aaKnown RBP7.42□□□□□ -1.22
CDK5RAP3-209ENST00000578663 SEMA7AO75326 666 aa7.42□□□□□ -1.22
CDK5RAP3-209ENST00000578663 ASS1P00966 412 aaKnown RBP7.42□□□□□ -1.22
CDK5RAP3-209ENST00000578663 MYL1P05976 194 aa7.42□□□□□ -1.22
CDK5RAP3-209ENST00000578663 TBC1D3HP0C7X1 549 aa7.42□□□□□ -1.22
CDK5RAP3-209ENST00000578663 MZF1P28698 734 aaPredicted RBP7.42□□□□□ -1.22
CDK5RAP3-209ENST00000578663 CD70P32970 193 aa7.42□□□□□ -1.22
CDK5RAP3-209ENST00000578663 DRD3P35462 400 aa7.42□□□□□ -1.22
CDK5RAP3-209ENST00000578663 CSKP41240 450 aa7.42□□□□□ -1.22
CDK5RAP3-209ENST00000578663 ASPAP45381 313 aa7.42□□□□□ -1.22
CDK5RAP3-209ENST00000578663 UQCRFS1P47985 274 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms