RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 FBRSL1Q9HCM7 1045 aaKnown RBP12.44□□□□□ -0.42
IFT20-207ENST00000578547 ATP13A1Q9HD20 1204 aa12.44□□□□□ -0.42
IFT20-207ENST00000578547 ARHGEF3Q9NR81 526 aa12.44□□□□□ -0.42
IFT20-207ENST00000578547 SMARCAL1Q9NZC9 954 aa12.44□□□□□ -0.42
IFT20-207ENST00000578547 MIA3Q5JRA6 1907 aa12.44□□□□□ -0.42
IFT20-207ENST00000578547 F5P12259 2224 aa12.43□□□□□ -0.42
IFT20-207ENST00000578547 ILVBLA1L0T0 632 aa12.43□□□□□ -0.42
IFT20-207ENST00000578547 RASA4BC9J798 803 aa12.43□□□□□ -0.42
IFT20-207ENST00000578547 CBX4O00257 560 aa12.43□□□□□ -0.42
IFT20-207ENST00000578547 PGRMC1O00264 195 aaKnown RBP12.43□□□□□ -0.42
IFT20-207ENST00000578547 RASA4O43374 803 aa12.43□□□□□ -0.42
IFT20-207ENST00000578547 KAT7O95251 611 aa12.43□□□□□ -0.42
IFT20-207ENST00000578547 APODP05090 189 aa12.43□□□□□ -0.42
IFT20-207ENST00000578547 CISD3P0C7P0 127 aa12.43□□□□□ -0.42
IFT20-207ENST00000578547 TGM2P21980 687 aa12.43□□□□□ -0.42
IFT20-207ENST00000578547 EIF2DP41214 584 aaKnown RBP12.43□□□□□ -0.42
IFT20-207ENST00000578547 PAPOLAP51003 745 aaKnown RBP12.43□□□□□ -0.42
IFT20-207ENST00000578547 GALK1P51570 392 aa12.43□□□□□ -0.42
IFT20-207ENST00000578547 NDST2P52849 883 aa12.43□□□□□ -0.42
IFT20-207ENST00000578547 OXCT1P55809 520 aa12.43□□□□□ -0.42
IFT20-207ENST00000578547 SIGLEC14Q08ET2 396 aa12.43□□□□□ -0.42
IFT20-207ENST00000578547 PARP15Q460N3 678 aa12.43□□□□□ -0.42
IFT20-207ENST00000578547 PITRM1Q5JRX3 1037 aa12.43□□□□□ -0.42
IFT20-207ENST00000578547 LEKR1Q6ZMV7 388 aa12.43□□□□□ -0.42
IFT20-207ENST00000578547 SFTPA1Q8IWL2 248 aa12.43□□□□□ -0.42
IFT20-207ENST00000578547 AHI1Q8N157 1196 aa12.43□□□□□ -0.42
IFT20-207ENST00000578547 SIX5Q8N196 739 aa12.43□□□□□ -0.42
IFT20-207ENST00000578547 PHTF2Q8N3S3 785 aa12.43□□□□□ -0.42
IFT20-207ENST00000578547 ATPAF2Q8N5M1 289 aa12.43□□□□□ -0.42
IFT20-207ENST00000578547 LZTR1Q8N653 840 aa12.43□□□□□ -0.42
IFT20-207ENST00000578547 TERB1Q8NA31 727 aa12.43□□□□□ -0.42
IFT20-207ENST00000578547 LRRN4Q8WUT4 740 aa12.43□□□□□ -0.42
IFT20-207ENST00000578547 P3H4Q92791 437 aa12.43□□□□□ -0.42
IFT20-207ENST00000578547 FEM1AQ9BSK4 669 aa12.43□□□□□ -0.42
IFT20-207ENST00000578547 MAGEH1Q9H213 219 aa12.43□□□□□ -0.42
IFT20-207ENST00000578547 LRRC19Q9H756 370 aa12.43□□□□□ -0.42
IFT20-207ENST00000578547 PRDM16Q9HAZ2 1276 aa12.43□□□□□ -0.42
IFT20-207ENST00000578547 DTLQ9NZJ0 730 aa12.43□□□□□ -0.42
IFT20-207ENST00000578547 FBXO10Q9UK96 956 aa12.43□□□□□ -0.42
IFT20-207ENST00000578547 NDRG2Q9UN36 371 aaKnown RBP12.43□□□□□ -0.42
IFT20-207ENST00000578547 EFR3BQ9Y2G0 817 aa12.43□□□□□ -0.42
IFT20-207ENST00000578547 VCANP13611 3396 aa12.43□□□□□ -0.42
IFT20-207ENST00000578547 TBC1D3BA6NDS4 549 aa12.42□□□□□ -0.42
IFT20-207ENST00000578547 ARHGAP42A6NI28 874 aa12.42□□□□□ -0.42
IFT20-207ENST00000578547 APOC4-APOC2K7ER74 178 aa12.42□□□□□ -0.42
IFT20-207ENST00000578547 CES2O00748 559 aa12.42□□□□□ -0.42
IFT20-207ENST00000578547 SNAP91O60641 907 aa12.42□□□□□ -0.42
IFT20-207ENST00000578547 URI1O94763 535 aaPredicted RBP12.42□□□□□ -0.42
IFT20-207ENST00000578547 APOC2P02655 101 aa12.42□□□□□ -0.42
IFT20-207ENST00000578547 TUBB4AP04350 444 aa12.42□□□□□ -0.42
IFT20-207ENST00000578547 ALADP13716 330 aa12.42□□□□□ -0.42
IFT20-207ENST00000578547 GLDCP23378 1020 aa12.42□□□□□ -0.42
IFT20-207ENST00000578547 ETFBP38117 255 aa12.42□□□□□ -0.42
IFT20-207ENST00000578547 SEC13P55735 322 aa12.42□□□□□ -0.42
IFT20-207ENST00000578547 YBEYP58557 167 aaPredicted RBP12.42□□□□□ -0.42
IFT20-207ENST00000578547 STARD6P59095 220 aa12.42□□□□□ -0.42
IFT20-207ENST00000578547 OTUD4Q01804 1114 aaKnown RBP12.42□□□□□ -0.42
IFT20-207ENST00000578547 PRKCQQ04759 706 aa12.42□□□□□ -0.42
IFT20-207ENST00000578547 GALNT2Q10471 571 aa12.42□□□□□ -0.42
IFT20-207ENST00000578547 SLC10A2Q12908 348 aaPredicted RBP12.42□□□□□ -0.42
IFT20-207ENST00000578547 SLC12A1Q13621 1099 aa12.42□□□□□ -0.42
IFT20-207ENST00000578547 PLEKHG6Q3KR16 790 aa12.42□□□□□ -0.42
IFT20-207ENST00000578547 PREPLQ4J6C6 727 aaPredicted RBP12.42□□□□□ -0.42
IFT20-207ENST00000578547 AFMIDQ63HM1 303 aa12.42□□□□□ -0.42
IFT20-207ENST00000578547 MBLAC2Q68D91 279 aa12.42□□□□□ -0.42
IFT20-207ENST00000578547 ZNF852Q6ZMS4 543 aa12.42□□□□□ -0.42
IFT20-207ENST00000578547 ZNF783Q6ZMS7 281 aa12.42□□□□□ -0.42
IFT20-207ENST00000578547 ARHGAP36Q6ZRI8 547 aa12.42□□□□□ -0.42
IFT20-207ENST00000578547 TRIM67Q6ZTA4 783 aa12.42□□□□□ -0.42
IFT20-207ENST00000578547 B4GALNT4Q76KP1 1039 aa12.42□□□□□ -0.42
IFT20-207ENST00000578547 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.42□□□□□ -0.42
IFT20-207ENST00000578547 CCNYQ8ND76 341 aa12.42□□□□□ -0.42
IFT20-207ENST00000578547 KIF18AQ8NI77 898 aa12.42□□□□□ -0.42
IFT20-207ENST00000578547 WFIKKN2Q8TEU8 576 aa12.42□□□□□ -0.42
IFT20-207ENST00000578547 SORCS1Q8WY21 1168 aa12.42□□□□□ -0.42
IFT20-207ENST00000578547 FAM3CQ92520 227 aa12.42□□□□□ -0.42
IFT20-207ENST00000578547 ARHGEF2Q92974 986 aaKnown RBP12.42□□□□□ -0.42
IFT20-207ENST00000578547 EXOC4Q96A65 974 aa12.42□□□□□ -0.42
IFT20-207ENST00000578547 MSANTD3Q96H12 275 aa12.42□□□□□ -0.42
IFT20-207ENST00000578547 LMLNQ96KR4 655 aa12.42□□□□□ -0.42
IFT20-207ENST00000578547 C2orf49Q9BVC5 232 aaPredicted RBP12.42□□□□□ -0.42
IFT20-207ENST00000578547 SP110Q9HB58 689 aa12.42□□□□□ -0.42
IFT20-207ENST00000578547 INTS6Q9UL03 887 aaKnown RBP12.42□□□□□ -0.42
IFT20-207ENST00000578547 HPCAL4Q9UM19 191 aa12.42□□□□□ -0.42
IFT20-207ENST00000578547 R3HDM2Q9Y2K5 976 aaKnown RBP12.42□□□□□ -0.42
IFT20-207ENST00000578547 SLC27A6Q9Y2P4 619 aa12.42□□□□□ -0.42
IFT20-207ENST00000578547 TRIOO75962 3097 aa12.41□□□□□ -0.42
IFT20-207ENST00000578547 TNFRSF10AO00220 468 aa12.41□□□□□ -0.42
IFT20-207ENST00000578547 MAN2B1O00754 1011 aa12.41□□□□□ -0.42
IFT20-207ENST00000578547 ZNF500O60304 480 aaPredicted RBP12.41□□□□□ -0.42
IFT20-207ENST00000578547 EGFP01133 1207 aa12.41□□□□□ -0.42
IFT20-207ENST00000578547 PRLRP16471 622 aa12.41□□□□□ -0.42
IFT20-207ENST00000578547 POLR2EP19388 210 aaKnown RBP12.41□□□□□ -0.42
IFT20-207ENST00000578547 MX2P20592 715 aa12.41□□□□□ -0.42
IFT20-207ENST00000578547 GRIA2P42262 883 aa12.41□□□□□ -0.42
IFT20-207ENST00000578547 CTSOP43234 321 aaPredicted RBP12.41□□□□□ -0.42
IFT20-207ENST00000578547 EIF3EP60228 445 aaKnown RBP12.41□□□□□ -0.42
IFT20-207ENST00000578547 GRSF1Q12849 480 aaKnown RBP eCLIP12.41□□□□□ -0.42
IFT20-207ENST00000578547 KLF1Q13351 362 aaPredicted RBP12.41□□□□□ -0.42
IFT20-207ENST00000578547 SERINC3Q13530 473 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms