RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 DDX53Q86TM3 631 aaKnown RBP11.37□□□□□ -0.59
SKA2-204ENST00000578519 CCDC33Q8N5R6 958 aa11.37□□□□□ -0.59
SKA2-204ENST00000578519 OTUD6BQ8N6M0 293 aa11.37□□□□□ -0.59
SKA2-204ENST00000578519 PTCD2Q8WV60 388 aaKnown RBP11.37□□□□□ -0.59
SKA2-204ENST00000578519 PLD4Q96BZ4 506 aa11.37□□□□□ -0.59
SKA2-204ENST00000578519 SEC16BQ96JE7 1060 aa11.37□□□□□ -0.59
SKA2-204ENST00000578519 ZNF333Q96JL9 665 aa11.37□□□□□ -0.59
SKA2-204ENST00000578519 ZNF512Q96ME7 567 aaPredicted RBP11.37□□□□□ -0.59
SKA2-204ENST00000578519 AGAP3Q96P47 875 aa11.37□□□□□ -0.59
SKA2-204ENST00000578519 IL12RB2Q99665 862 aa11.37□□□□□ -0.59
SKA2-204ENST00000578519 SLC39A8Q9C0K1 460 aa11.37□□□□□ -0.59
SKA2-204ENST00000578519 GLOD4Q9HC38 313 aa11.37□□□□□ -0.59
SKA2-204ENST00000578519 CASS4Q9NQ75 786 aa11.37□□□□□ -0.59
SKA2-204ENST00000578519 ANLNQ9NQW6 1124 aa11.37□□□□□ -0.59
SKA2-204ENST00000578519 RBM22Q9NW64 420 aaKnown RBP eCLIP11.37□□□□□ -0.59
SKA2-204ENST00000578519 MOCS1Q9NZB8 636 aa11.37□□□□□ -0.59
SKA2-204ENST00000578519 IPO11Q9UI26 975 aaKnown RBP11.37□□□□□ -0.59
SKA2-204ENST00000578519 VANGL2Q9ULK5 521 aa11.37□□□□□ -0.59
SKA2-204ENST00000578519 MAGED2Q9UNF1 606 aaPredicted RBP11.37□□□□□ -0.59
SKA2-204ENST00000578519 TTLL3Q9Y4R7 772 aa11.37□□□□□ -0.59
SKA2-204ENST00000578519 FAM237BA0A1B0GVD1 139 aa11.36□□□□□ -0.59
SKA2-204ENST00000578519 WDR27A2RRH5 827 aa11.36□□□□□ -0.59
SKA2-204ENST00000578519 COPEO14579 308 aa11.36□□□□□ -0.59
SKA2-204ENST00000578519 KIAA0355O15063 1070 aa11.36□□□□□ -0.59
SKA2-204ENST00000578519 CACNG3O60359 315 aa11.36□□□□□ -0.59
SKA2-204ENST00000578519 USP1O94782 785 aa11.36□□□□□ -0.59
SKA2-204ENST00000578519 ALADP13716 330 aa11.36□□□□□ -0.59
SKA2-204ENST00000578519 NFKB1P19838 968 aa11.36□□□□□ -0.59
SKA2-204ENST00000578519 MGAT1P26572 445 aa11.36□□□□□ -0.59
SKA2-204ENST00000578519 ETFBP38117 255 aa11.36□□□□□ -0.59
SKA2-204ENST00000578519 EPHB3P54753 998 aa11.36□□□□□ -0.59
SKA2-204ENST00000578519 HTRA3P83110 453 aa11.36□□□□□ -0.59
SKA2-204ENST00000578519 SLC18A2Q05940 514 aa11.36□□□□□ -0.59
SKA2-204ENST00000578519 MPP3Q13368 585 aa11.36□□□□□ -0.59
SKA2-204ENST00000578519 RAB33AQ14088 237 aa11.36□□□□□ -0.59
SKA2-204ENST00000578519 DBN1Q16643 649 aa11.36□□□□□ -0.59
SKA2-204ENST00000578519 MS4A13Q5J8X5 152 aa11.36□□□□□ -0.59
SKA2-204ENST00000578519 SYCP2LQ5T4T6 812 aa11.36□□□□□ -0.59
SKA2-204ENST00000578519 MARC1Q5VT66 337 aa11.36□□□□□ -0.59
SKA2-204ENST00000578519 AFMIDQ63HM1 303 aa11.36□□□□□ -0.59
SKA2-204ENST00000578519 PRSS55Q6UWB4 352 aaPredicted RBP11.36□□□□□ -0.59
SKA2-204ENST00000578519 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.36□□□□□ -0.59
SKA2-204ENST00000578519 TIFABQ6ZNK6 161 aa11.36□□□□□ -0.59
SKA2-204ENST00000578519 RGS9BPQ6ZS82 235 aa11.36□□□□□ -0.59
SKA2-204ENST00000578519 MARK2Q7KZI7 788 aaKnown RBP11.36□□□□□ -0.59
SKA2-204ENST00000578519 CHSY1Q86X52 802 aa11.36□□□□□ -0.59
SKA2-204ENST00000578519 ZNF354CQ86Y25 554 aa11.36□□□□□ -0.59
SKA2-204ENST00000578519 MIB1Q86YT6 1006 aa11.36□□□□□ -0.59
SKA2-204ENST00000578519 IGDCC3Q8IVU1 814 aa11.36□□□□□ -0.59
SKA2-204ENST00000578519 HERC6Q8IVU3 1022 aa11.36□□□□□ -0.59
SKA2-204ENST00000578519 SLC39A11Q8N1S5 342 aa11.36□□□□□ -0.59
SKA2-204ENST00000578519 NPWQ8N729 165 aa11.36□□□□□ -0.59
SKA2-204ENST00000578519 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.36□□□□□ -0.59
SKA2-204ENST00000578519 GIPC2Q8TF65 315 aa11.36□□□□□ -0.59
SKA2-204ENST00000578519 ARMC5Q96C12 935 aa11.36□□□□□ -0.59
SKA2-204ENST00000578519 ZNF689Q96CS4 500 aaPredicted RBP11.36□□□□□ -0.59
SKA2-204ENST00000578519 TRMT2BQ96GJ1 504 aaKnown RBP11.36□□□□□ -0.59
SKA2-204ENST00000578519 CELF6Q96J87 481 aaKnown RBP11.36□□□□□ -0.59
SKA2-204ENST00000578519 RPRD1AQ96P16 312 aaPredicted RBP11.36□□□□□ -0.59
SKA2-204ENST00000578519 ZNF317Q96PQ6 595 aaPredicted RBP11.36□□□□□ -0.59
SKA2-204ENST00000578519 TGS1Q96RS0 853 aaKnown RBP11.36□□□□□ -0.59
SKA2-204ENST00000578519 VPS11Q9H270 941 aa11.36□□□□□ -0.59
SKA2-204ENST00000578519 SP110Q9HB58 689 aa11.36□□□□□ -0.59
SKA2-204ENST00000578519 VPS45Q9NRW7 570 aa11.36□□□□□ -0.59
SKA2-204ENST00000578519 MRPL17Q9NRX2 175 aaKnown RBP11.36□□□□□ -0.59
SKA2-204ENST00000578519 ZFATQ9P243 1243 aa11.36□□□□□ -0.59
SKA2-204ENST00000578519 ASB3Q9Y575 518 aa11.36□□□□□ -0.59
SKA2-204ENST00000578519 SNX10Q9Y5X0 201 aa11.36□□□□□ -0.59
SKA2-204ENST00000578519 IGLV3-10A0A075B6K4 115 aa11.35□□□□□ -0.59
SKA2-204ENST00000578519 TYW5A2RUC4 315 aaKnown RBP11.35□□□□□ -0.59
SKA2-204ENST00000578519 TCP11X1B4DZS4 312 aa11.35□□□□□ -0.59
SKA2-204ENST00000578519 TRIM49D1C9J1S8 452 aa11.35□□□□□ -0.59
SKA2-204ENST00000578519 PRRG1O14668 218 aa11.35□□□□□ -0.59
SKA2-204ENST00000578519 TYROBPO43914 113 aa11.35□□□□□ -0.59
SKA2-204ENST00000578519 ACSL4O60488 711 aa11.35□□□□□ -0.59
SKA2-204ENST00000578519 MAFKO60675 156 aa11.35□□□□□ -0.59
SKA2-204ENST00000578519 RAMP2O60895 175 aa11.35□□□□□ -0.59
SKA2-204ENST00000578519 SPAG7O75391 227 aa11.35□□□□□ -0.59
SKA2-204ENST00000578519 ABLIM3O94929 683 aa11.35□□□□□ -0.59
SKA2-204ENST00000578519 ASMTLO95671 621 aa11.35□□□□□ -0.59
SKA2-204ENST00000578519 LATS1O95835 1130 aa11.35□□□□□ -0.59
SKA2-204ENST00000578519 EFEMP2O95967 443 aa11.35□□□□□ -0.59
SKA2-204ENST00000578519 IGLV3-27P01718 113 aa11.35□□□□□ -0.59
SKA2-204ENST00000578519 TACR2P21452 398 aa11.35□□□□□ -0.59
SKA2-204ENST00000578519 CES1P23141 567 aa11.35□□□□□ -0.59
SKA2-204ENST00000578519 ALDH3A1P30838 453 aa11.35□□□□□ -0.59
SKA2-204ENST00000578519 SPRP35270 261 aaPredicted RBP11.35□□□□□ -0.59
SKA2-204ENST00000578519 POLD2P49005 469 aa11.35□□□□□ -0.59
SKA2-204ENST00000578519 PAPOLAP51003 745 aaKnown RBP11.35□□□□□ -0.59
SKA2-204ENST00000578519 USP46P62068 366 aa11.35□□□□□ -0.59
SKA2-204ENST00000578519 IL10RBQ08334 325 aa11.35□□□□□ -0.59
SKA2-204ENST00000578519 LRRC14Q15048 493 aa11.35□□□□□ -0.59
SKA2-204ENST00000578519 POLD3Q15054 466 aaPredicted RBP11.35□□□□□ -0.59
SKA2-204ENST00000578519 PDK4Q16654 411 aa11.35□□□□□ -0.59
SKA2-204ENST00000578519 UGP2Q16851 508 aa11.35□□□□□ -0.59
SKA2-204ENST00000578519 PCID2Q5JVF3 399 aa11.35□□□□□ -0.59
SKA2-204ENST00000578519 STXBP5Q5T5C0 1151 aa11.35□□□□□ -0.59
SKA2-204ENST00000578519 RASIP1Q5U651 963 aa11.35□□□□□ -0.59
SKA2-204ENST00000578519 FYB2Q5VWT5 728 aa11.35□□□□□ -0.59
SKA2-204ENST00000578519 KCTD11Q693B1 232 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms