RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 PUM1Q14671 1186 aaKnown RBP eCLIP22.77■■□□□ 1.24
SMARCD2-206ENST00000577990 PLK5Q496M5 336 aa22.77■■□□□ 1.24
SMARCD2-206ENST00000577990 DGLUCYQ7Z3D6 616 aa22.77■■□□□ 1.24
SMARCD2-206ENST00000577990 TMPRSS6Q8IU80 811 aa22.77■■□□□ 1.24
SMARCD2-206ENST00000577990 ABCA7Q8IZY2 2146 aa22.77■■□□□ 1.24
SMARCD2-206ENST00000577990 PYROXD2Q8N2H3 581 aa22.77■■□□□ 1.24
SMARCD2-206ENST00000577990 ARFGAP1Q8N6T3 406 aa22.77■■□□□ 1.24
SMARCD2-206ENST00000577990 ARHGEF26Q96DR7 871 aa22.77■■□□□ 1.24
SMARCD2-206ENST00000577990 ZC3H10Q96K80 434 aaKnown RBP22.77■■□□□ 1.24
SMARCD2-206ENST00000577990 RPL10LQ96L21 214 aaKnown RBP22.77■■□□□ 1.24
SMARCD2-206ENST00000577990 NUP85Q9BW27 656 aa22.77■■□□□ 1.24
SMARCD2-206ENST00000577990 RETREG1Q9H6L5 497 aa22.77■■□□□ 1.24
SMARCD2-206ENST00000577990 NHEJ1Q9H9Q4 299 aaPredicted RBP22.77■■□□□ 1.24
SMARCD2-206ENST00000577990 FBRSQ9HAH7 460 aa22.77■■□□□ 1.24
SMARCD2-206ENST00000577990 PRDM16Q9HAZ2 1276 aa22.77■■□□□ 1.24
SMARCD2-206ENST00000577990 PRSS16Q9NQE7 514 aa22.77■■□□□ 1.24
SMARCD2-206ENST00000577990 DLL3Q9NYJ7 618 aa22.77■■□□□ 1.24
SMARCD2-206ENST00000577990 SLC25A13Q9UJS0 675 aa22.77■■□□□ 1.24
SMARCD2-206ENST00000577990 NEU3Q9UQ49 428 aa22.77■■□□□ 1.24
SMARCD2-206ENST00000577990 LAMA1P25391 3075 aa22.77■■□□□ 1.24
SMARCD2-206ENST00000577990 ILVBLA1L0T0 632 aa22.76■■□□□ 1.23
SMARCD2-206ENST00000577990 ZNF217O75362 1048 aa22.76■■□□□ 1.23
SMARCD2-206ENST00000577990 BCKDHBP21953 392 aa22.76■■□□□ 1.23
SMARCD2-206ENST00000577990 NNMTP40261 264 aa22.76■■□□□ 1.23
SMARCD2-206ENST00000577990 STK19P49842 368 aaPredicted RBP22.76■■□□□ 1.23
SMARCD2-206ENST00000577990 LMNB2Q03252 620 aa22.76■■□□□ 1.23
SMARCD2-206ENST00000577990 ELF2Q15723 593 aa22.76■■□□□ 1.23
SMARCD2-206ENST00000577990 HNRNPA1L2Q32P51 320 aaKnown RBP22.76■■□□□ 1.23
SMARCD2-206ENST00000577990 ZNF783Q6ZMS7 281 aa22.76■■□□□ 1.23
SMARCD2-206ENST00000577990 NLRP14Q86W24 1093 aa22.76■■□□□ 1.23
SMARCD2-206ENST00000577990 TC2NQ8N9U0 490 aa22.76■■□□□ 1.23
SMARCD2-206ENST00000577990 SIPA1Q96FS4 1042 aa22.76■■□□□ 1.23
SMARCD2-206ENST00000577990 CCDC42Q96M95 316 aa22.76■■□□□ 1.23
SMARCD2-206ENST00000577990 EPAS1Q99814 870 aa22.76■■□□□ 1.23
SMARCD2-206ENST00000577990 NCAPGQ9BPX3 1015 aa22.76■■□□□ 1.23
SMARCD2-206ENST00000577990 DUSP15Q9H1R2 295 aaPredicted RBP22.76■■□□□ 1.23
SMARCD2-206ENST00000577990 MTG2Q9H4K7 406 aa22.76■■□□□ 1.23
SMARCD2-206ENST00000577990 SLCO3A1Q9UIG8 710 aa22.76■■□□□ 1.23
SMARCD2-206ENST00000577990 TTC34A8MYJ7 566 aa22.75■■□□□ 1.23
SMARCD2-206ENST00000577990 PRPSAP2O60256 369 aa22.75■■□□□ 1.23
SMARCD2-206ENST00000577990 LRCH4O75427 683 aa22.75■■□□□ 1.23
SMARCD2-206ENST00000577990 RHOBTB1O94844 696 aa22.75■■□□□ 1.23
SMARCD2-206ENST00000577990 MIPP30301 263 aa22.75■■□□□ 1.23
SMARCD2-206ENST00000577990 MAPKAPK2P49137 400 aa22.75■■□□□ 1.23
SMARCD2-206ENST00000577990 VASPP50552 380 aaPredicted RBP22.75■■□□□ 1.23
SMARCD2-206ENST00000577990 KRT83P78385 493 aa22.75■■□□□ 1.23
SMARCD2-206ENST00000577990 ACAP1Q15027 740 aa22.75■■□□□ 1.23
SMARCD2-206ENST00000577990 CCDC6Q16204 474 aa22.75■■□□□ 1.23
SMARCD2-206ENST00000577990 METTL3Q86U44 580 aaKnown RBP22.75■■□□□ 1.23
SMARCD2-206ENST00000577990 DCAF4L2Q8NA75 395 aa22.75■■□□□ 1.23
SMARCD2-206ENST00000577990 PRCCQ92733 491 aaPredicted RBP22.75■■□□□ 1.23
SMARCD2-206ENST00000577990 LOXL4Q96JB6 756 aa22.75■■□□□ 1.23
SMARCD2-206ENST00000577990 PEBP4Q96S96 227 aa22.75■■□□□ 1.23
SMARCD2-206ENST00000577990 PSMB7Q99436 277 aa22.75■■□□□ 1.23
SMARCD2-206ENST00000577990 C2orf49Q9BVC5 232 aaPredicted RBP22.75■■□□□ 1.23
SMARCD2-206ENST00000577990 SEMA4GQ9NTN9 838 aa22.75■■□□□ 1.23
SMARCD2-206ENST00000577990 TMEM248Q9NWD8 314 aa22.75■■□□□ 1.23
SMARCD2-206ENST00000577990 GPATCH2LQ9NWQ4 482 aa22.75■■□□□ 1.23
SMARCD2-206ENST00000577990 PCSK1NQ9UHG2 260 aa22.75■■□□□ 1.23
SMARCD2-206ENST00000577990 MBD1Q9UIS9 605 aaPredicted RBP22.75■■□□□ 1.23
SMARCD2-206ENST00000577990 ANAPC7Q9UJX3 599 aa22.75■■□□□ 1.23
SMARCD2-206ENST00000577990 CYP8B1Q9UNU6 501 aa22.75■■□□□ 1.23
SMARCD2-206ENST00000577990 AP4E1Q9UPM8 1137 aa22.75■■□□□ 1.23
SMARCD2-206ENST00000577990 THADAQ6YHU6 1953 aa22.75■■□□□ 1.23
SMARCD2-206ENST00000577990 NUP205Q92621 2012 aa22.74■■□□□ 1.23
SMARCD2-206ENST00000577990 A0A0D9SEW6 157 aa22.74■■□□□ 1.23
SMARCD2-206ENST00000577990 EDDM13A0A1B0GTR0 161 aa22.74■■□□□ 1.23
SMARCD2-206ENST00000577990 CREB3O43889 395 aa22.74■■□□□ 1.23
SMARCD2-206ENST00000577990 H2AFZP0C0S5 128 aa22.74■■□□□ 1.23
SMARCD2-206ENST00000577990 PCK1P35558 622 aa22.74■■□□□ 1.23
SMARCD2-206ENST00000577990 SEMA3BQ13214 749 aa22.74■■□□□ 1.23
SMARCD2-206ENST00000577990 PIGHQ14442 188 aaPredicted RBP22.74■■□□□ 1.23
SMARCD2-206ENST00000577990 ERMARDQ5T6L9 678 aa22.74■■□□□ 1.23
SMARCD2-206ENST00000577990 PMS2CLQ68D20 193 aa22.74■■□□□ 1.23
SMARCD2-206ENST00000577990 H2AFVQ71UI9 128 aa22.74■■□□□ 1.23
SMARCD2-206ENST00000577990 CACUL1Q86Y37 369 aa22.74■■□□□ 1.23
SMARCD2-206ENST00000577990 FRMD1Q8N878 549 aa22.74■■□□□ 1.23
SMARCD2-206ENST00000577990 OR7D4Q8NG98 312 aa22.74■■□□□ 1.23
SMARCD2-206ENST00000577990 ZNF564Q8TBZ8 553 aaPredicted RBP22.74■■□□□ 1.23
SMARCD2-206ENST00000577990 CTNNBL1Q8WYA6 563 aaPredicted RBP22.74■■□□□ 1.23
SMARCD2-206ENST00000577990 SNRNP25Q9BV90 132 aaKnown RBP22.74■■□□□ 1.23
SMARCD2-206ENST00000577990 PACSIN1Q9BY11 444 aa22.74■■□□□ 1.23
SMARCD2-206ENST00000577990 SPTLC3Q9NUV7 552 aa22.74■■□□□ 1.23
SMARCD2-206ENST00000577990 IP6K2Q9UHH9 426 aa22.74■■□□□ 1.23
SMARCD2-206ENST00000577990 VPS51Q9UID3 782 aa22.74■■□□□ 1.23
SMARCD2-206ENST00000577990 CDV3Q9UKY7 258 aaKnown RBP22.74■■□□□ 1.23
SMARCD2-206ENST00000577990 IGHV1OR15-9A0A0B4J2B8 117 aa22.73■■□□□ 1.23
SMARCD2-206ENST00000577990 TARSL2A2RTX5 802 aaKnown RBP22.73■■□□□ 1.23
SMARCD2-206ENST00000577990 EIF3CLB5ME19 914 aaKnown RBP22.73■■□□□ 1.23
SMARCD2-206ENST00000577990 MAP3K13O43283 966 aa22.73■■□□□ 1.23
SMARCD2-206ENST00000577990 SNAP91O60641 907 aa22.73■■□□□ 1.23
SMARCD2-206ENST00000577990 SIN3BO75182 1162 aa22.73■■□□□ 1.23
SMARCD2-206ENST00000577990 EPHB2P29323 1055 aa22.73■■□□□ 1.23
SMARCD2-206ENST00000577990 HTR7P34969 479 aa22.73■■□□□ 1.23
SMARCD2-206ENST00000577990 FOXK2Q01167 660 aa22.73■■□□□ 1.23
SMARCD2-206ENST00000577990 GNA12Q03113 381 aa22.73■■□□□ 1.23
SMARCD2-206ENST00000577990 SLC36A4Q6YBV0 504 aa22.73■■□□□ 1.23
SMARCD2-206ENST00000577990 NIPA2Q8N8Q9 360 aa22.73■■□□□ 1.23
SMARCD2-206ENST00000577990 BTBD6Q96KE9 485 aa22.73■■□□□ 1.23
SMARCD2-206ENST00000577990 EIF3CQ99613 913 aaKnown RBP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms