RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 PABPC1P11940 636 aaKnown RBP16.52■□□□□ 0.24
VAPA-204ENST00000577901 ABCB4P21439 1286 aa16.52■□□□□ 0.24
VAPA-204ENST00000577901 TNFAIP3P21580 790 aa16.52■□□□□ 0.24
VAPA-204ENST00000577901 SGSHP51688 502 aa16.52■□□□□ 0.24
VAPA-204ENST00000577901 ZBTB16Q05516 673 aa16.52■□□□□ 0.24
VAPA-204ENST00000577901 NME3Q13232 169 aa16.52■□□□□ 0.24
VAPA-204ENST00000577901 EIF4EBP2Q13542 120 aaPredicted RBP16.52■□□□□ 0.24
VAPA-204ENST00000577901 ASIC2Q16515 512 aa16.52■□□□□ 0.24
VAPA-204ENST00000577901 CLEC16AQ2KHT3 1053 aa16.52■□□□□ 0.24
VAPA-204ENST00000577901 COL28A1Q2UY09 1125 aa16.52■□□□□ 0.24
VAPA-204ENST00000577901 C2CD6Q53TS8 623 aa16.52■□□□□ 0.24
VAPA-204ENST00000577901 MPP7Q5T2T1 576 aa16.52■□□□□ 0.24
VAPA-204ENST00000577901 PIK3R6Q5UE93 754 aa16.52■□□□□ 0.24
VAPA-204ENST00000577901 MBLAC2Q68D91 279 aa16.52■□□□□ 0.24
VAPA-204ENST00000577901 MMS22LQ6ZRQ5 1243 aa16.52■□□□□ 0.24
VAPA-204ENST00000577901 SND1Q7KZF4 910 aaKnown RBP eCLIP16.52■□□□□ 0.244e-15■□□□□ 9.2
VAPA-204ENST00000577901 ZNF557Q8N988 423 aaPredicted RBP16.52■□□□□ 0.24
VAPA-204ENST00000577901 SLC30A5Q8TAD4 765 aa16.52■□□□□ 0.24
VAPA-204ENST00000577901 BIRC7Q96CA5 298 aa16.52■□□□□ 0.24
VAPA-204ENST00000577901 IQCDQ96DY2 449 aa16.52■□□□□ 0.24
VAPA-204ENST00000577901 BTN2A3PQ96KV6 586 aa16.52■□□□□ 0.24
VAPA-204ENST00000577901 PCDHB18PQ96TA0 734 aa16.52■□□□□ 0.24
VAPA-204ENST00000577901 AIPL1Q9NZN9 384 aa16.52■□□□□ 0.24
VAPA-204ENST00000577901 ADAM22Q9P0K1 906 aa16.52■□□□□ 0.24
VAPA-204ENST00000577901 COX16Q9P0S2 106 aa16.52■□□□□ 0.24
VAPA-204ENST00000577901 IFNKQ9P0W0 207 aa16.52■□□□□ 0.24
VAPA-204ENST00000577901 MUC22E2RYF6 1773 aaPredicted RBP16.51■□□□□ 0.23
VAPA-204ENST00000577901 SMG1Q96Q15 3661 aaKnown RBP16.51■□□□□ 0.23
VAPA-204ENST00000577901 KCNU1A8MYU2 1149 aa16.51■□□□□ 0.23
VAPA-204ENST00000577901 KCNK3O14649 394 aa16.51■□□□□ 0.23
VAPA-204ENST00000577901 F9P00740 461 aa16.51■□□□□ 0.23
VAPA-204ENST00000577901 POLR2EP19388 210 aaKnown RBP16.51■□□□□ 0.23
VAPA-204ENST00000577901 CD27P26842 260 aa16.51■□□□□ 0.23
VAPA-204ENST00000577901 SLC6A4P31645 630 aa16.51■□□□□ 0.23
VAPA-204ENST00000577901 GRIA4P48058 902 aa16.51■□□□□ 0.23
VAPA-204ENST00000577901 PITX1P78337 314 aaPredicted RBP16.51■□□□□ 0.23
VAPA-204ENST00000577901 CENPCQ03188 943 aa16.51■□□□□ 0.23
VAPA-204ENST00000577901 FAM133BQ5BKY9 247 aaKnown RBP16.51■□□□□ 0.23
VAPA-204ENST00000577901 PPP1R2P3Q6NXS1 205 aa16.51■□□□□ 0.23
VAPA-204ENST00000577901 RFWD3Q6PCD5 774 aa16.51■□□□□ 0.23
VAPA-204ENST00000577901 ARCQ7LC44 396 aa16.51■□□□□ 0.23
VAPA-204ENST00000577901 PDZD3Q86UT5 571 aa16.51■□□□□ 0.23
VAPA-204ENST00000577901 PHF13Q86YI8 300 aaPredicted RBP16.51■□□□□ 0.23
VAPA-204ENST00000577901 CCDC117Q8IWD4 279 aaPredicted RBP16.51■□□□□ 0.23
VAPA-204ENST00000577901 HJURPQ8NCD3 748 aaPredicted RBP16.51■□□□□ 0.23
VAPA-204ENST00000577901 NPY6RQ99463 290 aa16.51■□□□□ 0.23
VAPA-204ENST00000577901 C11orf70Q9BRQ4 267 aa16.51■□□□□ 0.23
VAPA-204ENST00000577901 NUCKS1Q9H1E3 243 aaKnown RBP16.51■□□□□ 0.23
VAPA-204ENST00000577901 SGK2Q9HBY8 427 aa16.51■□□□□ 0.23
VAPA-204ENST00000577901 SUN2Q9UH99 717 aa16.51■□□□□ 0.23
VAPA-204ENST00000577901 RAXQ9Y2V3 346 aa16.51■□□□□ 0.23
VAPA-204ENST00000577901 PAXBP1Q9Y5B6 917 aa16.51■□□□□ 0.23
VAPA-204ENST00000577901 ADAMTS20P59510 1910 aa16.51■□□□□ 0.23
VAPA-204ENST00000577901 PLXNB3Q9ULL4 1909 aa16.51■□□□□ 0.23
VAPA-204ENST00000577901 CBFA2T2O43439 604 aa16.5■□□□□ 0.23
VAPA-204ENST00000577901 TBL1XO60907 577 aa16.5■□□□□ 0.23
VAPA-204ENST00000577901 CALB1P05937 261 aa16.5■□□□□ 0.23
VAPA-204ENST00000577901 CD70P32970 193 aa16.5■□□□□ 0.23
VAPA-204ENST00000577901 GRK6P43250 576 aa16.5■□□□□ 0.23
VAPA-204ENST00000577901 SULT1E1P49888 294 aa16.5■□□□□ 0.23
VAPA-204ENST00000577901 SLC25A52Q3SY17 297 aa16.5■□□□□ 0.23
VAPA-204ENST00000577901 TTC31Q49AM3 519 aaPredicted RBP16.5■□□□□ 0.23
VAPA-204ENST00000577901 MS4A13Q5J8X5 152 aa16.5■□□□□ 0.23
VAPA-204ENST00000577901 ZNF776Q68DI1 518 aaPredicted RBP16.5■□□□□ 0.23
VAPA-204ENST00000577901 NADSYN1Q6IA69 706 aa16.5■□□□□ 0.23
VAPA-204ENST00000577901 LAYNQ6UX15 382 aa16.5■□□□□ 0.23
VAPA-204ENST00000577901 MARCH9Q86YJ5 346 aa16.5■□□□□ 0.23
VAPA-204ENST00000577901 GALNT15Q8N3T1 639 aa16.5■□□□□ 0.23
VAPA-204ENST00000577901 WFDC5Q8TCV5 224 aa16.5■□□□□ 0.23
VAPA-204ENST00000577901 IGSF8Q969P0 613 aa16.5■□□□□ 0.23
VAPA-204ENST00000577901 TTYH3Q9C0H2 523 aa16.5■□□□□ 0.23
VAPA-204ENST00000577901 WDCPQ9H6R7 721 aa16.5■□□□□ 0.23
VAPA-204ENST00000577901 TMEM59LQ9UK28 342 aa16.5■□□□□ 0.23
VAPA-204ENST00000577901 A0A1W2PQJ5 194 aa16.49■□□□□ 0.23
VAPA-204ENST00000577901 H0Y8X5 98 aa16.49■□□□□ 0.23
VAPA-204ENST00000577901 TNFSF14O43557 240 aa16.49■□□□□ 0.23
VAPA-204ENST00000577901 PBX1P40424 430 aa16.49■□□□□ 0.23
VAPA-204ENST00000577901 CCT8P50990 548 aa16.49■□□□□ 0.23
VAPA-204ENST00000577901 DEUP1Q05D60 604 aa16.49■□□□□ 0.23
VAPA-204ENST00000577901 KLHL30Q0D2K2 578 aa16.49■□□□□ 0.23
VAPA-204ENST00000577901 RAP1GAP2Q684P5 730 aa16.49■□□□□ 0.23
VAPA-204ENST00000577901 ACAD10Q6JQN1 1059 aa16.49■□□□□ 0.23
VAPA-204ENST00000577901 ADAT2Q7Z6V5 191 aaKnown RBP16.49■□□□□ 0.23
VAPA-204ENST00000577901 CHSY1Q86X52 802 aa16.49■□□□□ 0.23
VAPA-204ENST00000577901 RNF214Q8ND24 703 aa16.49■□□□□ 0.23
VAPA-204ENST00000577901 GANCQ8TET4 914 aa16.49■□□□□ 0.23
VAPA-204ENST00000577901 HNRNPLLQ8WVV9 542 aaKnown RBP16.49■□□□□ 0.23
VAPA-204ENST00000577901 NT5C3BQ969T7 300 aa16.49■□□□□ 0.23
VAPA-204ENST00000577901 PGAP3Q96FM1 320 aaPredicted RBP16.49■□□□□ 0.23
VAPA-204ENST00000577901 ORAI3Q9BRQ5 295 aa16.49■□□□□ 0.23
VAPA-204ENST00000577901 XPO4Q9C0E2 1151 aaKnown RBP16.49■□□□□ 0.23
VAPA-204ENST00000577901 RSPH9Q9H1X1 276 aaPredicted RBP16.49■□□□□ 0.23
VAPA-204ENST00000577901 MTG2Q9H4K7 406 aa16.49■□□□□ 0.23
VAPA-204ENST00000577901 HAUS4Q9H6D7 363 aa16.49■□□□□ 0.23
VAPA-204ENST00000577901 METTL5Q9NRN9 209 aaKnown RBP16.49■□□□□ 0.23
VAPA-204ENST00000577901 STIM2Q9P246 746 aa16.49■□□□□ 0.23
VAPA-204ENST00000577901 DKK4Q9UBT3 224 aa16.49■□□□□ 0.23
VAPA-204ENST00000577901 XPO7Q9UIA9 1087 aaKnown RBP16.49■□□□□ 0.23
VAPA-204ENST00000577901 NCKAP1Q9Y2A7 1128 aa16.49■□□□□ 0.23
VAPA-204ENST00000577901 PTPRBP23467 1997 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms