RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 SNX24Q9Y343 169 aa12.76□□□□□ -0.37
TSEN54-204ENST00000577197 SH3BP1Q9Y3L3 701 aa12.76□□□□□ -0.37
TSEN54-204ENST00000577197 ZFP37Q9Y6Q3 630 aaPredicted RBP12.76□□□□□ -0.37
TSEN54-204ENST00000577197 ESYT3A0FGR9 886 aa12.75□□□□□ -0.37
TSEN54-204ENST00000577197 H3BQ06 376 aaPredicted RBP12.75□□□□□ -0.37
TSEN54-204ENST00000577197 LEFTY2O00292 366 aa12.75□□□□□ -0.37
TSEN54-204ENST00000577197 MATN3O15232 486 aa12.75□□□□□ -0.37
TSEN54-204ENST00000577197 CACNG3O60359 315 aa12.75□□□□□ -0.37
TSEN54-204ENST00000577197 RAMP2O60895 175 aa12.75□□□□□ -0.37
TSEN54-204ENST00000577197 PPFIA2O75334 1257 aa12.75□□□□□ -0.37
TSEN54-204ENST00000577197 IFNB1P01574 187 aa12.75□□□□□ -0.37
TSEN54-204ENST00000577197 TPSB2P20231 275 aa12.75□□□□□ -0.37
TSEN54-204ENST00000577197 FSHRP23945 695 aa12.75□□□□□ -0.37
TSEN54-204ENST00000577197 SLC6A4P31645 630 aa12.75□□□□□ -0.37
TSEN54-204ENST00000577197 RPL22P35268 128 aaKnown RBP12.75□□□□□ -0.37
TSEN54-204ENST00000577197 HSPA9P38646 679 aaKnown RBP12.75□□□□□ -0.37
TSEN54-204ENST00000577197 GDF10P55107 478 aa12.75□□□□□ -0.37
TSEN54-204ENST00000577197 NTHL1P78549 312 aa12.75□□□□□ -0.37
TSEN54-204ENST00000577197 GPS1Q13098 491 aa12.75□□□□□ -0.37
TSEN54-204ENST00000577197 SEMA5AQ13591 1074 aa12.75□□□□□ -0.37
TSEN54-204ENST00000577197 HNRNPDQ14103 355 aaKnown RBP12.75□□□□□ -0.37
TSEN54-204ENST00000577197 TPSAB1Q15661 275 aa12.75□□□□□ -0.37
TSEN54-204ENST00000577197 SLC14A2Q15849 920 aa12.75□□□□□ -0.37
TSEN54-204ENST00000577197 LEXMQ3ZCV2 418 aa12.75□□□□□ -0.37
TSEN54-204ENST00000577197 MPPE1Q53F39 396 aa12.75□□□□□ -0.37
TSEN54-204ENST00000577197 LGI2Q8N0V4 545 aa12.75□□□□□ -0.37
TSEN54-204ENST00000577197 ZCCHC9Q8N567 271 aaKnown RBP12.75□□□□□ -0.37
TSEN54-204ENST00000577197 MCUQ8NE86 351 aa12.75□□□□□ -0.37
TSEN54-204ENST00000577197 FBXO25Q8TCJ0 367 aa12.75□□□□□ -0.37
TSEN54-204ENST00000577197 IFT81Q8WYA0 676 aa12.75□□□□□ -0.37
TSEN54-204ENST00000577197 IGSF8Q969P0 613 aa12.75□□□□□ -0.37
TSEN54-204ENST00000577197 SLC22A12Q96S37 553 aa12.75□□□□□ -0.37
TSEN54-204ENST00000577197 IL12RB2Q99665 862 aa12.75□□□□□ -0.37
TSEN54-204ENST00000577197 ANAPC5Q9UJX4 755 aa12.75□□□□□ -0.37
TSEN54-204ENST00000577197 USP15Q9Y4E8 981 aaPredicted RBP12.75□□□□□ -0.37
TSEN54-204ENST00000577197 AP3B1O00203 1094 aa12.74□□□□□ -0.37
TSEN54-204ENST00000577197 RNF103O00237 685 aa12.74□□□□□ -0.37
TSEN54-204ENST00000577197 PSMD3O43242 534 aa12.74□□□□□ -0.37
TSEN54-204ENST00000577197 MBTPS2O43462 519 aa12.74□□□□□ -0.37
TSEN54-204ENST00000577197 MAFKO60675 156 aa12.74□□□□□ -0.37
TSEN54-204ENST00000577197 HMBSP08397 361 aa12.74□□□□□ -0.37
TSEN54-204ENST00000577197 MYBL2P10244 700 aa12.74□□□□□ -0.37
TSEN54-204ENST00000577197 VAV1P15498 845 aa12.74□□□□□ -0.37
TSEN54-204ENST00000577197 OR1E1P30953 314 aa12.74□□□□□ -0.37
TSEN54-204ENST00000577197 PLTPP55058 493 aa12.74□□□□□ -0.37
TSEN54-204ENST00000577197 IL10RBQ08334 325 aa12.74□□□□□ -0.37
TSEN54-204ENST00000577197 WASHC5Q12768 1159 aa12.74□□□□□ -0.37
TSEN54-204ENST00000577197 SLC12A1Q13621 1099 aa12.74□□□□□ -0.37
TSEN54-204ENST00000577197 RFTN1Q14699 578 aaPredicted RBP12.74□□□□□ -0.37
TSEN54-204ENST00000577197 CBX2Q14781 532 aaPredicted RBP12.74□□□□□ -0.37
TSEN54-204ENST00000577197 TEAD2Q15562 447 aa12.74□□□□□ -0.37
TSEN54-204ENST00000577197 ZNF77Q15935 545 aa12.74□□□□□ -0.37
TSEN54-204ENST00000577197 SLC5A9Q2M3M2 681 aa12.74□□□□□ -0.37
TSEN54-204ENST00000577197 PARP6Q2NL67 630 aa12.74□□□□□ -0.37
TSEN54-204ENST00000577197 TEX44Q53QW1 395 aa12.74□□□□□ -0.37
TSEN54-204ENST00000577197 ANKRD20A2Q5SQ80 823 aa12.74□□□□□ -0.37
TSEN54-204ENST00000577197 ANKRD20A1Q5TYW2 823 aa12.74□□□□□ -0.37
TSEN54-204ENST00000577197 ANKRD20A3Q5VUR7 823 aa12.74□□□□□ -0.37
TSEN54-204ENST00000577197 IZUMO3Q5VZ72 239 aa12.74□□□□□ -0.37
TSEN54-204ENST00000577197 ARHGEF18Q6ZSZ5 1173 aa12.74□□□□□ -0.37
TSEN54-204ENST00000577197 HDXQ7Z353 690 aa12.74□□□□□ -0.37
TSEN54-204ENST00000577197 METTL3Q86U44 580 aaKnown RBP12.74□□□□□ -0.37
TSEN54-204ENST00000577197 CNPY4Q8N129 248 aa12.74□□□□□ -0.37
TSEN54-204ENST00000577197 CELF5Q8N6W0 485 aaKnown RBP12.74□□□□□ -0.37
TSEN54-204ENST00000577197 NAT8LQ8N9F0 302 aa12.74□□□□□ -0.37
TSEN54-204ENST00000577197 CCNYQ8ND76 341 aa12.74□□□□□ -0.37
TSEN54-204ENST00000577197 ZSCAN18Q8TBC5 510 aaPredicted RBP12.74□□□□□ -0.37
TSEN54-204ENST00000577197 PRICKLE1Q96MT3 831 aaPredicted RBP12.74□□□□□ -0.37
TSEN54-204ENST00000577197 CYP2S1Q96SQ9 504 aa12.74□□□□□ -0.37
TSEN54-204ENST00000577197 LGMNQ99538 433 aa12.74□□□□□ -0.37
TSEN54-204ENST00000577197 FAM118BQ9BPY3 351 aa12.74□□□□□ -0.37
TSEN54-204ENST00000577197 TXLNGYQ9BZA5 131 aa12.74□□□□□ -0.37
TSEN54-204ENST00000577197 DPH5Q9H2P9 285 aa12.74□□□□□ -0.37
TSEN54-204ENST00000577197 NOL6Q9H6R4 1146 aaKnown RBP12.74□□□□□ -0.37
TSEN54-204ENST00000577197 GKN1Q9NS71 199 aa12.74□□□□□ -0.37
TSEN54-204ENST00000577197 MPP6Q9NZW5 540 aa12.74□□□□□ -0.37
TSEN54-204ENST00000577197 MARK1Q9P0L2 795 aa12.74□□□□□ -0.37
TSEN54-204ENST00000577197 CFAP97Q9P2B7 532 aa12.74□□□□□ -0.37
TSEN54-204ENST00000577197 FAM50BQ9Y247 325 aa12.74□□□□□ -0.37
TSEN54-204ENST00000577197 MFHAS1Q9Y4C4 1052 aa12.74□□□□□ -0.37
TSEN54-204ENST00000577197 SNX10Q9Y5X0 201 aa12.74□□□□□ -0.37
TSEN54-204ENST00000577197 CDH23Q9H251 3354 aa12.73□□□□□ -0.37
TSEN54-204ENST00000577197 NUP205Q92621 2012 aa12.73□□□□□ -0.37
TSEN54-204ENST00000577197 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.73□□□□□ -0.37
TSEN54-204ENST00000577197 GOLGA6CA6NDK9 693 aa12.73□□□□□ -0.37
TSEN54-204ENST00000577197 GOLGA6BA6NDN3 693 aa12.73□□□□□ -0.37
TSEN54-204ENST00000577197 GRXCR2A6NFK2 248 aa12.73□□□□□ -0.37
TSEN54-204ENST00000577197 RASA4BC9J798 803 aa12.73□□□□□ -0.37
TSEN54-204ENST00000577197 RASA4O43374 803 aa12.73□□□□□ -0.37
TSEN54-204ENST00000577197 CYBBP04839 570 aa12.73□□□□□ -0.37
TSEN54-204ENST00000577197 GOLGA6DP0CG33 693 aa12.73□□□□□ -0.37
TSEN54-204ENST00000577197 MLNP12872 115 aa12.73□□□□□ -0.37
TSEN54-204ENST00000577197 TSHRP16473 764 aa12.73□□□□□ -0.37
TSEN54-204ENST00000577197 PTPN3P26045 913 aa12.73□□□□□ -0.37
TSEN54-204ENST00000577197 RENBPP51606 427 aa12.73□□□□□ -0.37
TSEN54-204ENST00000577197 ITGA8P53708 1063 aa12.73□□□□□ -0.37
TSEN54-204ENST00000577197 MRPS25P82663 173 aaKnown RBP12.73□□□□□ -0.37
TSEN54-204ENST00000577197 SARNPP82979 210 aaKnown RBP12.73□□□□□ -0.37
TSEN54-204ENST00000577197 ZXDBP98169 803 aa12.73□□□□□ -0.37
TSEN54-204ENST00000577197 AP1B1Q10567 949 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms