RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 ARID5BQ14865 1188 aa9.95□□□□□ -0.82
NPLOC4-216ENST00000574344 CST6Q15828 149 aa9.95□□□□□ -0.82
NPLOC4-216ENST00000574344 ACCSLQ4AC99 568 aa9.95□□□□□ -0.82
NPLOC4-216ENST00000574344 SMYD5Q6GMV2 418 aa9.95□□□□□ -0.82
NPLOC4-216ENST00000574344 FBXL22Q6P050 247 aa9.95□□□□□ -0.82
NPLOC4-216ENST00000574344 IL27RAQ6UWB1 636 aa9.95□□□□□ -0.82
NPLOC4-216ENST00000574344 ZDHHC17Q8IUH5 632 aa9.95□□□□□ -0.82
NPLOC4-216ENST00000574344 MMAAQ8IVH4 418 aaKnown RBP9.95□□□□□ -0.82
NPLOC4-216ENST00000574344 KDM1BQ8NB78 822 aa9.95□□□□□ -0.82
NPLOC4-216ENST00000574344 ZNF397Q8NF99 534 aaPredicted RBP9.95□□□□□ -0.82
NPLOC4-216ENST00000574344 KIF18AQ8NI77 898 aa9.95□□□□□ -0.82
NPLOC4-216ENST00000574344 C18orf8Q96DM3 657 aa9.95□□□□□ -0.82
NPLOC4-216ENST00000574344 LMLNQ96KR4 655 aa9.95□□□□□ -0.82
NPLOC4-216ENST00000574344 MRGPRX3Q96LB0 322 aa9.95□□□□□ -0.82
NPLOC4-216ENST00000574344 PCMTD1Q96MG8 357 aaPredicted RBP9.95□□□□□ -0.82
NPLOC4-216ENST00000574344 PRMT1Q99873 361 aaKnown RBP9.95□□□□□ -0.82
NPLOC4-216ENST00000574344 MUC3BQ9H195 1237 aa9.95□□□□□ -0.82
NPLOC4-216ENST00000574344 RSPH9Q9H1X1 276 aaPredicted RBP9.95□□□□□ -0.82
NPLOC4-216ENST00000574344 PABPC3Q9H361 631 aaKnown RBP9.95□□□□□ -0.82
NPLOC4-216ENST00000574344 GAREM1Q9H706 876 aa9.95□□□□□ -0.82
NPLOC4-216ENST00000574344 SGK2Q9HBY8 427 aa9.95□□□□□ -0.82
NPLOC4-216ENST00000574344 PIGVQ9NUD9 493 aa9.95□□□□□ -0.82
NPLOC4-216ENST00000574344 DNAAF2Q9NVR5 837 aaKnown RBP9.95□□□□□ -0.82
NPLOC4-216ENST00000574344 RRN3Q9NYV6 651 aa9.95□□□□□ -0.82
NPLOC4-216ENST00000574344 VPS28Q9UK41 221 aa9.95□□□□□ -0.82
NPLOC4-216ENST00000574344 SCML1Q9UN30 329 aa9.95□□□□□ -0.82
NPLOC4-216ENST00000574344 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.95□□□□□ -0.82
NPLOC4-216ENST00000574344 HS3ST4Q9Y661 456 aa9.95□□□□□ -0.82
NPLOC4-216ENST00000574344 EPG5Q9HCE0 2579 aa9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 A0A1B0GVT2 93 aa9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 A0A1W2PQC6 194 aa9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 TARSL2A2RTX5 802 aaKnown RBP9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 LRRC72A6NJI9 287 aa9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 UPK3BL1B0FP48 263 aa9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 UPK3BL2E5RIL1 263 aa9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 F8VZ95 297 aa9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 DYNC1I1O14576 645 aa9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 BNIP3LO60238 219 aa9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 SH3BP5O60239 455 aa9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 PAGE1O75459 146 aa9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 GFPT2O94808 682 aa9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 IPO7O95373 1038 aaKnown RBP9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 ADH1BP00325 375 aa9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 IL1BP01584 269 aa9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 MMEP08473 750 aa9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 CCDC175P0C221 793 aa9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 SPINK2P20155 84 aa9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 CSNK1EP49674 416 aaKnown RBP9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 SLC14A1Q13336 389 aa9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 C2CD6Q53TS8 623 aa9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 BRMS1LQ5PSV4 323 aa9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 NAA35Q5VZE5 725 aa9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 USP30Q70CQ3 517 aa9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 PIP4P1Q86T03 277 aa9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 NOP9Q86U38 636 aaKnown RBP9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 NAXDQ8IW45 347 aa9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 STK40Q8N2I9 435 aa9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 MYRIPQ8NFW9 859 aa9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 SETD7Q8WTS6 366 aaKnown RBP9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 ZNF592Q92610 1267 aa9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 IGSF8Q969P0 613 aa9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 BIRC7Q96CA5 298 aa9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 SPAG5Q96R06 1193 aa9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 TBCBQ99426 244 aa9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 STK33Q9BYT3 514 aa9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 TKTL2Q9H0I9 626 aa9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 WDCPQ9H6R7 721 aa9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 FAM207AQ9NSI2 230 aaPredicted RBP9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 SERGEFQ9UGK8 458 aa9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 SLCO3A1Q9UIG8 710 aa9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 PTPRBP23467 1997 aa9.94□□□□□ -0.82
NPLOC4-216ENST00000574344 AKAP13Q12802 2813 aa9.93□□□□□ -0.82
NPLOC4-216ENST00000574344 KMT2BQ9UMN6 2715 aaPredicted RBP9.93□□□□□ -0.82
NPLOC4-216ENST00000574344 KNL1Q8NG31 2342 aa9.93□□□□□ -0.82
NPLOC4-216ENST00000574344 CLDN11O75508 207 aa9.93□□□□□ -0.82
NPLOC4-216ENST00000574344 LSM8O95777 96 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-216ENST00000574344 TOP3BO95985 862 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-216ENST00000574344 F9P00740 461 aa9.93□□□□□ -0.82
NPLOC4-216ENST00000574344 RHOCP08134 193 aa9.93□□□□□ -0.82
NPLOC4-216ENST00000574344 CD59P13987 128 aa9.93□□□□□ -0.82
NPLOC4-216ENST00000574344 TFE3P19532 575 aaPredicted RBP9.93□□□□□ -0.82
NPLOC4-216ENST00000574344 CD27P26842 260 aa9.93□□□□□ -0.82
NPLOC4-216ENST00000574344 SLC8A1P32418 973 aa9.93□□□□□ -0.82
NPLOC4-216ENST00000574344 CDH5P33151 784 aaPredicted RBP9.93□□□□□ -0.82
NPLOC4-216ENST00000574344 KLK7P49862 253 aa9.93□□□□□ -0.82
NPLOC4-216ENST00000574344 IRAK1P51617 712 aa9.93□□□□□ -0.82
NPLOC4-216ENST00000574344 CDH4P55283 916 aa9.93□□□□□ -0.82
NPLOC4-216ENST00000574344 POLR2FP61218 127 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-216ENST00000574344 EIF4EBP2Q13542 120 aaPredicted RBP9.93□□□□□ -0.82
NPLOC4-216ENST00000574344 HNRNPDQ14103 355 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-216ENST00000574344 ELAVL3Q14576 367 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-216ENST00000574344 HLA-BQ31612 363 aa9.93□□□□□ -0.82
NPLOC4-216ENST00000574344 C9orf64Q5T6V5 341 aa9.93□□□□□ -0.82
NPLOC4-216ENST00000574344 OTUD1Q5VV17 481 aaPredicted RBP9.93□□□□□ -0.82
NPLOC4-216ENST00000574344 KIAA0895LQ68EN5 471 aa9.93□□□□□ -0.82
NPLOC4-216ENST00000574344 CXorf57Q6NSI4 855 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-216ENST00000574344 NCEH1Q6PIU2 408 aa9.93□□□□□ -0.82
NPLOC4-216ENST00000574344 LAYNQ6UX15 382 aa9.93□□□□□ -0.82
NPLOC4-216ENST00000574344 LRRC31Q6UY01 552 aa9.93□□□□□ -0.82
NPLOC4-216ENST00000574344 NYAP1Q6ZVC0 841 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms