RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 PDAP1Q13442 181 aaKnown RBP10.32□□□□□ -0.76
SMG6-213ENST00000573166 DPYSL3Q14195 570 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 LONRF1Q17RB8 773 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 POM121L1PQ3SYA9 428 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 TMCO4Q5TGY1 634 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 FBXL19Q6PCT2 694 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 SRLQ86TD4 932 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 CCNJLQ8IV13 435 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 CABS1Q96KC9 395 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 FAM129AQ9BZQ8 928 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 SHOC2Q9UQ13 582 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 TRIOBPQ9H2D6 2365 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 WDR27A2RRH5 827 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 TRIM43BA6NCK2 446 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 A8MX80 341 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 ABLIM1O14639 778 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 DNALI1O14645 258 aaPredicted RBP10.32□□□□□ -0.76
SMG6-213ENST00000573166 GPC4O75487 556 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 RFPL2O75678 378 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 CYP11A1P05108 521 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 CHRM3P20309 590 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 FECHP22830 423 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 CD86P42081 329 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 POLR2LP62875 67 aaKnown RBP10.32□□□□□ -0.76
SMG6-213ENST00000573166 PTK6Q13882 451 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 ERAP2Q6P179 960 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 LRRTM3Q86VH5 581 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 LRRC6Q86X45 466 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 VSIG1Q86XK7 387 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 GDPD5Q8WTR4 605 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 TRIM43Q96BQ3 446 aaPredicted RBP10.32□□□□□ -0.76
SMG6-213ENST00000573166 ZMYM5Q9UJ78 669 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 DOLKQ9UPQ8 538 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 TLR6Q9Y2C9 796 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.32□□□□□ -0.76
SMG6-213ENST00000573166 ETS1P14921 441 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 NFKB1P19838 968 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 KCNQ1P51787 676 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 MBTPS1Q14703 1052 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 PARP6Q2NL67 630 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 SYTL3Q4VX76 610 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 C6orf163Q5TEZ5 329 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 LRRC57Q8N9N7 239 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 ST13P5Q8NFI4 369 aaPredicted RBP10.32□□□□□ -0.76
SMG6-213ENST00000573166 OR2W6PQ8NHA6 318 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 HDAC7Q8WUI4 952 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 ELMO2Q96JJ3 720 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 ARHGEF4Q9NR80 690 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 TDP1Q9NUW8 608 aa10.32□□□□□ -0.76
SMG6-213ENST00000573166 ZFP37Q9Y6Q3 630 aaPredicted RBP10.32□□□□□ -0.76
SMG6-213ENST00000573166 MTA2O94776 668 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 IL1BP01584 269 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 YBEYP58557 167 aaPredicted RBP10.31□□□□□ -0.76
SMG6-213ENST00000573166 RPS24P62847 133 aaKnown RBP10.31□□□□□ -0.76
SMG6-213ENST00000573166 KDSRQ06136 332 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 RAB33AQ14088 237 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 TEAD2Q15562 447 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 TTC7BQ86TV6 843 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 ZNF598Q86UK7 904 aaKnown RBP10.31□□□□□ -0.76
SMG6-213ENST00000573166 CPNE8Q86YQ8 564 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 PLD5Q8N7P1 536 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 CCNYL1Q8N7R7 359 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 HERC2P3Q9BVR0 1158 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 CXCL16Q9H2A7 254 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 TASP1Q9H6P5 420 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 MLXIPLQ9NP71 852 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 COMMD8Q9NX08 183 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 DRG1Q9Y295 367 aaKnown RBP10.31□□□□□ -0.76
SMG6-213ENST00000573166 SRCAPQ6ZRS2 3230 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 PECAM1P16284 738 aaPredicted RBP10.31□□□□□ -0.76
SMG6-213ENST00000573166 ITGALP20701 1170 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 CDKN2BP42772 138 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 RPL21P46778 160 aaKnown RBP10.31□□□□□ -0.76
SMG6-213ENST00000573166 UBE3AQ05086 875 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 OR7D4Q8NG98 312 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 P2RY11Q96G91 374 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 ETNK1Q9HBU6 452 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 TMLHEQ9NVH6 421 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 EFR3BQ9Y2G0 817 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 CAPN7Q9Y6W3 813 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 TMEM189-UBE2V1I3L0A0 370 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 TGM5O43548 720 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 RHOP08100 348 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 HDAC4P56524 1084 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 DSG1Q02413 1049 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 ADGRF1Q5T601 910 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 THEMIS2Q5TEJ8 643 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 GRAMD4Q6IC98 578 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 TTC9BQ8N6N2 239 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 OR6K2Q8NGY2 324 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 SH3KBP1Q96B97 665 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 CNOT10Q9H9A5 744 aaKnown RBP10.31□□□□□ -0.76
SMG6-213ENST00000573166 DZANK1Q9NVP4 752 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.31□□□□□ -0.76
SMG6-213ENST00000573166 IRAK4Q9NWZ3 460 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 NSMCE4AQ9NXX6 385 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 NCKAP1Q9Y2A7 1128 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 MFSD11O43934 449 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 PYGLP06737 847 aa10.31□□□□□ -0.76
SMG6-213ENST00000573166 FGFR3P22607 806 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms